RNA–Protein interactions for RNA: ENST00000607772.5

CNKSR3-205, Transcript of CNKSR family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNKSR3, Length 21,063 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNKSR3-205ENST00000607772 ANK3Q12955 4377 aaKnown RBP3.33□□□□□ -1.88
CNKSR3-205ENST00000607772 KRTAP3-1Q9BYR8 98 aa3.32□□□□□ -1.88
CNKSR3-205ENST00000607772 SVEP1Q4LDE5 3571 aa3.27□□□□□ -1.89
CNKSR3-205ENST00000607772 CSMD2Q7Z408 3487 aa3.25□□□□□ -1.89
CNKSR3-205ENST00000607772 DNAH10Q8IVF4 4471 aa3.23□□□□□ -1.89
CNKSR3-205ENST00000607772 KRTAP3-2Q9BYR7 98 aa3.22□□□□□ -1.89
CNKSR3-205ENST00000607772 HUWE1Q7Z6Z7 4374 aaKnown RBP3.22□□□□□ -1.89
CNKSR3-205ENST00000607772 FRAS1Q86XX4 4008 aa3.17□□□□□ -1.9
CNKSR3-205ENST00000607772 VPS13BQ7Z7G8 4022 aa3.16□□□□□ -1.9
CNKSR3-205ENST00000607772 VPS13DQ5THJ4 4388 aa3.15□□□□□ -1.9
CNKSR3-205ENST00000607772 KRTAP10-12P60413 245 aa3.11□□□□□ -1.91
CNKSR3-205ENST00000607772 CRCT1Q9UGL9 99 aa3.1□□□□□ -1.91
CNKSR3-205ENST00000607772 KRTAP3-3Q9BYR6 98 aa3.09□□□□□ -1.91
CNKSR3-205ENST00000607772 KRTAP12-3P60328 96 aa3.08□□□□□ -1.92
CNKSR3-205ENST00000607772 PRKDCP78527 4128 aaKnown RBP3.07□□□□□ -1.92
CNKSR3-205ENST00000607772 KRTAP4-5Q9BYR2 181 aa3.06□□□□□ -1.92
CNKSR3-205ENST00000607772 DNAH11Q96DT5 4516 aa3.06□□□□□ -1.92
CNKSR3-205ENST00000607772 MT1HL1P0DM35 61 aa3.05□□□□□ -1.92
CNKSR3-205ENST00000607772 LORP23490 312 aaPredicted RBP2.97□□□□□ -1.93
CNKSR3-205ENST00000607772 LCE3AQ5TA76 89 aa2.97□□□□□ -1.93
CNKSR3-205ENST00000607772 DNAH8Q96JB1 4490 aa2.95□□□□□ -1.94
CNKSR3-205ENST00000607772 DNAH17Q9UFH2 4485 aa2.95□□□□□ -1.94
CNKSR3-205ENST00000607772 KRTAP10-4P60372 401 aaPredicted RBP2.93□□□□□ -1.94
CNKSR3-205ENST00000607772 PKHD1P08F94 4074 aa2.93□□□□□ -1.94
CNKSR3-205ENST00000607772 DNAH9Q9NYC9 4486 aa2.92□□□□□ -1.94
CNKSR3-205ENST00000607772 KRTAP10-5P60370 271 aa2.91□□□□□ -1.94
CNKSR3-205ENST00000607772 DYNC2H1Q8NCM8 4307 aaKnown RBP2.91□□□□□ -1.94
CNKSR3-205ENST00000607772 FAT2Q9NYQ8 4349 aa2.87□□□□□ -1.95
CNKSR3-205ENST00000607772 LRP1Q07954 4544 aaKnown RBP2.85□□□□□ -1.95
CNKSR3-205ENST00000607772 DYNC1H1Q14204 4646 aaKnown RBP2.83□□□□□ -1.96
CNKSR3-205ENST00000607772 KRTAP4-1Q9BYQ7 146 aa2.81□□□□□ -1.96
CNKSR3-205ENST00000607772 KRTAP8-1Q8IUC2 63 aa2.77□□□□□ -1.97
CNKSR3-205ENST00000607772 PKD1P98161 4303 aa2.76□□□□□ -1.97
CNKSR3-205ENST00000607772 PLECQ15149 4684 aaKnown RBP2.75□□□□□ -1.97
CNKSR3-205ENST00000607772 HSPG2P98160 4391 aa2.73□□□□□ -1.97
CNKSR3-205ENST00000607772 PKHD1L1Q86WI1 4243 aa2.72□□□□□ -1.97
CNKSR3-205ENST00000607772 FAT1Q14517 4588 aa2.71□□□□□ -1.97
CNKSR3-205ENST00000607772 SACSQ9NZJ4 4579 aa2.71□□□□□ -1.98
CNKSR3-205ENST00000607772 LCE3CQ5T5A8 94 aa2.7□□□□□ -1.98
CNKSR3-205ENST00000607772 KRTAP19-5Q3LI72 72 aa2.68□□□□□ -1.98
CNKSR3-205ENST00000607772 KRTAP19-4Q3LI73 84 aa2.68□□□□□ -1.98
CNKSR3-205ENST00000607772 TNXBP22105 4242 aa2.68□□□□□ -1.98
CNKSR3-205ENST00000607772 SPRR5A0A1B0GTR4 108 aa2.68□□□□□ -1.98
CNKSR3-205ENST00000607772 RYR1P21817 5038 aa2.66□□□□□ -1.98
CNKSR3-205ENST00000607772 MT1HP80294 61 aa2.65□□□□□ -1.99
CNKSR3-205ENST00000607772 MYCBP2O75592 4640 aa2.64□□□□□ -1.99
CNKSR3-205ENST00000607772 MT2AP02795 61 aa2.64□□□□□ -1.99
CNKSR3-205ENST00000607772 APOBP04114 4563 aaKnown RBP2.63□□□□□ -1.99
CNKSR3-205ENST00000607772 DNAH5Q8TE73 4624 aa2.63□□□□□ -1.99
CNKSR3-205ENST00000607772 MT1FP04733 61 aa2.61□□□□□ -1.99
CNKSR3-205ENST00000607772 KRTAP12-4P60329 112 aa2.61□□□□□ -1.99
CNKSR3-205ENST00000607772 SPRR2GQ9BYE4 73 aa2.59□□□□□ -1.99
CNKSR3-205ENST00000607772 SPRR2FQ96RM1 72 aa2.58□□□□□ -2
CNKSR3-205ENST00000607772 KRTAP10-7P60409 375 aaPredicted RBP2.54□□□□□ -2
CNKSR3-205ENST00000607772 STARD9Q9P2P6 4700 aa2.54□□□□□ -2
CNKSR3-205ENST00000607772 LRP1BQ9NZR2 4599 aa2.54□□□□□ -2
CNKSR3-205ENST00000607772 FAT3Q8TDW7 4589 aa2.53□□□□□ -2.01
CNKSR3-205ENST00000607772 KRTAP17-1Q9BYP8 105 aa2.51□□□□□ -2.01
CNKSR3-205ENST00000607772 LCE3BQ5TA77 95 aa2.5□□□□□ -2.01
CNKSR3-205ENST00000607772 MT3P25713 68 aa2.49□□□□□ -2.01
CNKSR3-205ENST00000607772 MT1GP13640 62 aa2.43□□□□□ -2.02
CNKSR3-205ENST00000607772 MT1XP80297 61 aa2.43□□□□□ -2.02
CNKSR3-205ENST00000607772 MUC17Q685J3 4493 aa2.43□□□□□ -2.02
CNKSR3-205ENST00000607772 KRTAP19-1Q8IUB9 90 aa2.42□□□□□ -2.02
CNKSR3-205ENST00000607772 KRTAP4-8A0A0G2JLE6 195 aa2.41□□□□□ -2.02
CNKSR3-205ENST00000607772 KRTAP4-8Q9BYQ9 185 aa2.41□□□□□ -2.02
CNKSR3-205ENST00000607772 SPRR2EP22531 72 aa2.4□□□□□ -2.02
CNKSR3-205ENST00000607772 SPRR2BP35325 72 aa2.4□□□□□ -2.02
CNKSR3-205ENST00000607772 SPRR2AP35326 72 aa2.4□□□□□ -2.02
CNKSR3-205ENST00000607772 DNHD1Q96M86 4753 aa2.39□□□□□ -2.03
CNKSR3-205ENST00000607772 KRTAP19-8Q3LI54 63 aa2.39□□□□□ -2.03
CNKSR3-205ENST00000607772 LCE3EQ5T5B0 92 aa2.38□□□□□ -2.03
CNKSR3-205ENST00000607772 LCE3DQ9BYE3 92 aa2.37□□□□□ -2.03
CNKSR3-205ENST00000607772 MT1BP07438 61 aa2.37□□□□□ -2.03
CNKSR3-205ENST00000607772 BIRC6Q9NR09 4857 aa2.34□□□□□ -2.03
CNKSR3-205ENST00000607772 HYDINQ4G0P3 5121 aa2.34□□□□□ -2.03
CNKSR3-205ENST00000607772 KRTAP9-8Q9BYQ0 159 aa2.32□□□□□ -2.04
CNKSR3-205ENST00000607772 PRM1P04553 51 aa2.32□□□□□ -2.04
CNKSR3-205ENST00000607772 HERC1Q15751 4861 aa2.31□□□□□ -2.04
CNKSR3-205ENST00000607772 KRTAP9-3Q9BYQ3 159 aa2.31□□□□□ -2.04
CNKSR3-205ENST00000607772 KRTAP4-7Q9BYR0 210 aa2.3□□□□□ -2.04
CNKSR3-205ENST00000607772 LCE2BO14633 110 aa2.29□□□□□ -2.04
CNKSR3-205ENST00000607772 SPRR2DP22532 72 aa2.29□□□□□ -2.04
CNKSR3-205ENST00000607772 RYR3Q15413 4870 aa2.29□□□□□ -2.04
CNKSR3-205ENST00000607772 LCE2CQ5TA81 110 aa2.28□□□□□ -2.04
CNKSR3-205ENST00000607772 PCLOQ9Y6V0 5065 aa2.27□□□□□ -2.05
CNKSR3-205ENST00000607772 LPAP08519 4548 aa2.24□□□□□ -2.05
CNKSR3-205ENST00000607772 LOC100996750A0A140TA64 210 aa2.23□□□□□ -2.05
CNKSR3-205ENST00000607772 MT1LQ93083 61 aa2.23□□□□□ -2.05
CNKSR3-205ENST00000607772 KMT2CQ8NEZ4 4911 aaKnown RBP2.21□□□□□ -2.06
CNKSR3-205ENST00000607772 LRP2P98164 4655 aa2.21□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP2-3P0C7H8 128 aa2.19□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP2-4Q9BYR9 128 aa2.19□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP2-1Q9BYU5 128 aa2.19□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP4-3Q9BYR4 195 aa2.19□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP19-3Q7Z4W3 81 aa2.18□□□□□ -2.06
CNKSR3-205ENST00000607772 MT1EP04732 61 aa2.16□□□□□ -2.06
CNKSR3-205ENST00000607772 KRTAP19-2Q3LHN2 52 aa2.15□□□□□ -2.07
CNKSR3-205ENST00000607772 MT4P47944 62 aa2.14□□□□□ -2.07
CNKSR3-205ENST00000607772 KRTAP4-9Q9BYQ8 210 aa2.14□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 93.5 ms