RNA–Protein interactions for RNA: ENST00000606570.1

SNX5-218, Transcript of sorting nexin 5, humanhuman

Gene SNX5, Length 3,931 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX5-218ENST00000606570 KRTAP10-2P60368 255 aa3.63□□□□□ -1.83
SNX5-218ENST00000606570 VPS13DQ5THJ4 4388 aa3.63□□□□□ -1.83
SNX5-218ENST00000606570 HYDINQ4G0P3 5121 aa3.6□□□□□ -1.83
SNX5-218ENST00000606570 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.83
SNX5-218ENST00000606570 KRTAP10-1P60331 282 aa3.59□□□□□ -1.84
SNX5-218ENST00000606570 SMR3BP02814 79 aaPredicted RBP3.57□□□□□ -1.84
SNX5-218ENST00000606570 DNAH8Q96JB1 4490 aa3.56□□□□□ -1.84
SNX5-218ENST00000606570 DNAH17Q9UFH2 4485 aa3.55□□□□□ -1.84
SNX5-218ENST00000606570 PKHD1P08F94 4074 aa3.55□□□□□ -1.84
SNX5-218ENST00000606570 KRTAP10-8P60410 259 aa3.55□□□□□ -1.84
SNX5-218ENST00000606570 KRTAP1-4P0C5Y4 121 aa3.54□□□□□ -1.84
SNX5-218ENST00000606570 S4R3F8 94 aa3.54□□□□□ -1.84
SNX5-218ENST00000606570 XP32Q5T750 250 aa3.53□□□□□ -1.84
SNX5-218ENST00000606570 DNAH5Q8TE73 4624 aa3.51□□□□□ -1.85
SNX5-218ENST00000606570 FAT2Q9NYQ8 4349 aa3.51□□□□□ -1.85
SNX5-218ENST00000606570 DNAH11Q96DT5 4516 aa3.5□□□□□ -1.85
SNX5-218ENST00000606570 PKD1P98161 4303 aa3.5□□□□□ -1.85
SNX5-218ENST00000606570 INE1O15225 51 aa3.48□□□□□ -1.85
SNX5-218ENST00000606570 KRTAP13-4Q3LI77 160 aa3.45□□□□□ -1.86
SNX5-218ENST00000606570 KRTAP12-2P59991 146 aa3.44□□□□□ -1.86
SNX5-218ENST00000606570 LRP1BQ9NZR2 4599 aa3.44□□□□□ -1.86
SNX5-218ENST00000606570 SACSQ9NZJ4 4579 aa3.43□□□□□ -1.86
SNX5-218ENST00000606570 RPS29P62273 56 aaKnown RBP3.43□□□□□ -1.86
SNX5-218ENST00000606570 VPS13BQ7Z7G8 4022 aa3.42□□□□□ -1.86
SNX5-218ENST00000606570 KMT2CQ8NEZ4 4911 aaKnown RBP3.42□□□□□ -1.86
SNX5-218ENST00000606570 FAT3Q8TDW7 4589 aa3.39□□□□□ -1.87
SNX5-218ENST00000606570 KRTAP10-6P60371 365 aaPredicted RBP3.36□□□□□ -1.87
SNX5-218ENST00000606570 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
SNX5-218ENST00000606570 FAT1Q14517 4588 aa3.33□□□□□ -1.88
SNX5-218ENST00000606570 PP632Q6XCG6 107 aa3.33□□□□□ -1.88
SNX5-218ENST00000606570 RYR3Q15413 4870 aa3.32□□□□□ -1.88
SNX5-218ENST00000606570 RYR2Q92736 4967 aa3.32□□□□□ -1.88
SNX5-218ENST00000606570 DYNC1H1Q14204 4646 aaKnown RBP3.31□□□□□ -1.88
SNX5-218ENST00000606570 M0QZ58 72 aa3.31□□□□□ -1.88
SNX5-218ENST00000606570 APOBP04114 4563 aaKnown RBP3.29□□□□□ -1.88
SNX5-218ENST00000606570 KRTAP17-1Q9BYP8 105 aa3.25□□□□□ -1.89
SNX5-218ENST00000606570 LRP1Q07954 4544 aaKnown RBP3.24□□□□□ -1.89
SNX5-218ENST00000606570 Q5VSD8 79 aa3.21□□□□□ -1.9
SNX5-218ENST00000606570 TNXBP22105 4242 aa3.2□□□□□ -1.9
SNX5-218ENST00000606570 EPPK1P58107 5090 aaKnown RBP3.19□□□□□ -1.9
SNX5-218ENST00000606570 MYCBP2O75592 4640 aa3.19□□□□□ -1.9
SNX5-218ENST00000606570 HSPG2P98160 4391 aa3.19□□□□□ -1.9
SNX5-218ENST00000606570 BIRC6Q9NR09 4857 aa3.19□□□□□ -1.9
SNX5-218ENST00000606570 KIAA1109Q2LD37 5005 aa3.16□□□□□ -1.9
SNX5-218ENST00000606570 SPRR5A0A1B0GTR4 108 aa3.15□□□□□ -1.91
SNX5-218ENST00000606570 KRTAP10-4P60372 401 aaPredicted RBP3.14□□□□□ -1.91
SNX5-218ENST00000606570 A0A1B0GVY2 172 aa3.13□□□□□ -1.91
SNX5-218ENST00000606570 RYR1P21817 5038 aa3.12□□□□□ -1.91
SNX5-218ENST00000606570 LPAP08519 4548 aa3.1□□□□□ -1.91
SNX5-218ENST00000606570 ABCA13Q86UQ4 5058 aa3.1□□□□□ -1.91
SNX5-218ENST00000606570 KRTAP4-5Q9BYR2 181 aa3.03□□□□□ -1.92
SNX5-218ENST00000606570 TNP1P09430 55 aa3.02□□□□□ -1.93
SNX5-218ENST00000606570 LRP2P98164 4655 aa3.02□□□□□ -1.93
SNX5-218ENST00000606570 MT1HL1P0DM35 61 aa2.98□□□□□ -1.93
SNX5-218ENST00000606570 MUC17Q685J3 4493 aa2.94□□□□□ -1.94
SNX5-218ENST00000606570 MUC2Q02817 5179 aa2.94□□□□□ -1.94
SNX5-218ENST00000606570 HERC2O95714 4834 aa2.93□□□□□ -1.94
SNX5-218ENST00000606570 LCE5AQ5TCM9 118 aa2.92□□□□□ -1.94
SNX5-218ENST00000606570 PCLOQ9Y6V0 5065 aa2.91□□□□□ -1.94
SNX5-218ENST00000606570 HERC1Q15751 4861 aa2.9□□□□□ -1.95
SNX5-218ENST00000606570 KRTAP19-4Q3LI73 84 aa2.89□□□□□ -1.95
SNX5-218ENST00000606570 KRTAP9-4Q9BYQ2 154 aa2.88□□□□□ -1.95
SNX5-218ENST00000606570 M0R2T5 61 aa2.87□□□□□ -1.95
SNX5-218ENST00000606570 FLGP20930 4061 aaPredicted RBP2.83□□□□□ -1.96
SNX5-218ENST00000606570 KRTAP4-1Q9BYQ7 146 aa2.82□□□□□ -1.96
SNX5-218ENST00000606570 KRTAP10-10P60014 251 aa2.81□□□□□ -1.96
SNX5-218ENST00000606570 LCE4AQ5TA78 99 aa2.8□□□□□ -1.96
SNX5-218ENST00000606570 FAT4Q6V0I7 4981 aa2.78□□□□□ -1.96
SNX5-218ENST00000606570 RNF213Q63HN8 5207 aa2.78□□□□□ -1.97
SNX5-218ENST00000606570 KRTAP9-6A0A140TA67 174 aa2.75□□□□□ -1.97
SNX5-218ENST00000606570 HMCN2Q8NDA2 5059 aa2.75□□□□□ -1.97
SNX5-218ENST00000606570 KRTAP9-7A8MTY7 169 aa2.74□□□□□ -1.97
SNX5-218ENST00000606570 LCE3AQ5TA76 89 aa2.74□□□□□ -1.97
SNX5-218ENST00000606570 KRTAP9-9Q9BYP9 154 aa2.74□□□□□ -1.97
SNX5-218ENST00000606570 UBR4Q5T4S7 5183 aa2.73□□□□□ -1.97
SNX5-218ENST00000606570 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
SNX5-218ENST00000606570 FSIP2Q5CZC0 6907 aa2.71□□□□□ -1.98
SNX5-218ENST00000606570 KRTAP2-2Q9BYT5 123 aa2.71□□□□□ -1.98
SNX5-218ENST00000606570 LCE1FQ5T754 118 aa2.71□□□□□ -1.98
SNX5-218ENST00000606570 KRTAP19-2Q3LHN2 52 aa2.65□□□□□ -1.99
SNX5-218ENST00000606570 DSTQ03001 7570 aaKnown RBP2.64□□□□□ -1.99
SNX5-218ENST00000606570 KRTAP12-3P60328 96 aa2.63□□□□□ -1.99
SNX5-218ENST00000606570 LCE3CQ5T5A8 94 aa2.63□□□□□ -1.99
SNX5-218ENST00000606570 CRCT1Q9UGL9 99 aa2.62□□□□□ -1.99
SNX5-218ENST00000606570 KRTAP10-12P60413 245 aa2.61□□□□□ -1.99
SNX5-218ENST00000606570 SPRR2GQ9BYE4 73 aa2.61□□□□□ -1.99
SNX5-218ENST00000606570 MACF1Q9UPN3 7388 aaKnown RBP2.6□□□□□ -1.99
SNX5-218ENST00000606570 KRTAP19-1Q8IUB9 90 aa2.59□□□□□ -1.99
SNX5-218ENST00000606570 KRTAP8-1Q8IUC2 63 aa2.58□□□□□ -2
SNX5-218ENST00000606570 LCE1AQ5T7P2 110 aa2.57□□□□□ -2
SNX5-218ENST00000606570 GPR98Q8WXG9 6306 aa2.53□□□□□ -2
SNX5-218ENST00000606570 LCE1EQ5T753 118 aa2.53□□□□□ -2
SNX5-218ENST00000606570 MT1FP04733 61 aa2.52□□□□□ -2.01
SNX5-218ENST00000606570 MT2AP02795 61 aa2.51□□□□□ -2.01
SNX5-218ENST00000606570 KRTAP9-3Q9BYQ3 159 aa2.49□□□□□ -2.01
SNX5-218ENST00000606570 MT1HP80294 61 aa2.49□□□□□ -2.01
SNX5-218ENST00000606570 KRTAP6-3Q3LI67 103 aa2.49□□□□□ -2.01
SNX5-218ENST00000606570 MT3P25713 68 aa2.47□□□□□ -2.01
SNX5-218ENST00000606570 KRTAP10-7P60409 375 aaPredicted RBP2.46□□□□□ -2.02
SNX5-218ENST00000606570 MT1XP80297 61 aa2.46□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms