RNA–Protein interactions for RNA: ENST00000606213.5

PTPRN-219, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 4

Gene PTPRN, Length 592 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-219ENST00000606213 MP68P56378 58 aa10.68□□□□□ -0.7
PTPRN-219ENST00000606213 LINC00208Q96KT6 92 aa10.68□□□□□ -0.7
PTPRN-219ENST00000606213 KRTAP3-3Q9BYR6 98 aa10.66□□□□□ -0.7
PTPRN-219ENST00000606213 NDUFC1O43677 76 aa10.62□□□□□ -0.71
PTPRN-219ENST00000606213 KLKP1Q107X0 134 aa10.61□□□□□ -0.71
PTPRN-219ENST00000606213 OCR1Q9BZK8 76 aa10.6□□□□□ -0.71
PTPRN-219ENST00000606213 A8MUN3 132 aa10.59□□□□□ -0.71
PTPRN-219ENST00000606213 SCGB1A1P11684 91 aa10.56□□□□□ -0.72
PTPRN-219ENST00000606213 Q5VV11 94 aa10.56□□□□□ -0.72
PTPRN-219ENST00000606213 IMUPQ9GZP8 106 aa10.56□□□□□ -0.72
PTPRN-219ENST00000606213 SPRR2GQ9BYE4 73 aa10.55□□□□□ -0.72
PTPRN-219ENST00000606213 CRIPTQ9P021 101 aa10.49□□□□□ -0.73
PTPRN-219ENST00000606213 H3BPC8 53 aa10.47□□□□□ -0.73
PTPRN-219ENST00000606213 KRTAP19-8Q3LI54 63 aa10.45□□□□□ -0.74
PTPRN-219ENST00000606213 MT1BP07438 61 aa10.44□□□□□ -0.74
PTPRN-219ENST00000606213 A6NN06 94 aa10.42□□□□□ -0.74
PTPRN-219ENST00000606213 H0YAA0 97 aa10.41□□□□□ -0.74
PTPRN-219ENST00000606213 ADM2Q7Z4H4 148 aa10.36□□□□□ -0.75
PTPRN-219ENST00000606213 K7ERU9 68 aa10.33□□□□□ -0.76
PTPRN-219ENST00000606213 DMAC1Q96GE9 116 aa10.28□□□□□ -0.76
PTPRN-219ENST00000606213 MT-ATP8P03928 68 aa10.26□□□□□ -0.77
PTPRN-219ENST00000606213 KRTAP6-3Q3LI67 103 aa10.25□□□□□ -0.77
PTPRN-219ENST00000606213 SMIM20Q8N5G0 67 aa10.24□□□□□ -0.77
PTPRN-219ENST00000606213 KRTAP10-5P60370 271 aa10.22□□□□□ -0.77
PTPRN-219ENST00000606213 C20orf197Q8N268 126 aa10.2□□□□□ -0.78
PTPRN-219ENST00000606213 TRAV7A0A075B6U4 112 aa10.18□□□□□ -0.78
PTPRN-219ENST00000606213 R4GN34 69 aa10.14□□□□□ -0.79
PTPRN-219ENST00000606213 ACYP2P14621 99 aa10.11□□□□□ -0.79
PTPRN-219ENST00000606213 P0C880 135 aa10.07□□□□□ -0.8
PTPRN-219ENST00000606213 NEBP20929 6669 aa10.06□□□□□ -0.8
PTPRN-219ENST00000606213 PLAC4Q8WY50 150 aa10.05□□□□□ -0.8
PTPRN-219ENST00000606213 M0QZ58 72 aa10.04□□□□□ -0.8
PTPRN-219ENST00000606213 SPTSSBQ8NFR3 76 aa10.03□□□□□ -0.8
PTPRN-219ENST00000606213 CHKB-CPT1BH3BT56 60 aa9.99□□□□□ -0.81
PTPRN-219ENST00000606213 PRO2289Q9P1D8 64 aa9.99□□□□□ -0.81
PTPRN-219ENST00000606213 MUC12Q9UKN1 5478 aa9.99□□□□□ -0.81
PTPRN-219ENST00000606213 SNURFQ9Y675 71 aa9.98□□□□□ -0.81
PTPRN-219ENST00000606213 KRTAP3-2Q9BYR7 98 aa9.94□□□□□ -0.82
PTPRN-219ENST00000606213 LINC01554Q52M75 96 aa9.93□□□□□ -0.82
PTPRN-219ENST00000606213 SERP2Q8N6R1 65 aa9.86□□□□□ -0.83
PTPRN-219ENST00000606213 MT1XP80297 61 aa9.82□□□□□ -0.84
PTPRN-219ENST00000606213 SPANXA2-OT1Q8N9U9 137 aa9.82□□□□□ -0.84
PTPRN-219ENST00000606213 KRTAP5-9P26371 169 aa9.74□□□□□ -0.85
PTPRN-219ENST00000606213 KMT2DO14686 5537 aa9.72□□□□□ -0.85
PTPRN-219ENST00000606213 MDN1Q9NU22 5596 aa9.7□□□□□ -0.86
PTPRN-219ENST00000606213 KRTAP20-1Q3LI63 56 aa9.61□□□□□ -0.87
PTPRN-219ENST00000606213 KRTAP12-2P59991 146 aa9.58□□□□□ -0.88
PTPRN-219ENST00000606213 KRTAP8-1Q8IUC2 63 aa9.57□□□□□ -0.88
PTPRN-219ENST00000606213 COX7CP15954 63 aa9.56□□□□□ -0.88
PTPRN-219ENST00000606213 COA5Q86WW8 74 aa9.56□□□□□ -0.88
PTPRN-219ENST00000606213 SPRR2FQ96RM1 72 aa9.56□□□□□ -0.88
PTPRN-219ENST00000606213 SEC61GP60059 68 aa9.48□□□□□ -0.89
PTPRN-219ENST00000606213 SERP1Q9Y6X1 66 aa9.44□□□□□ -0.9
PTPRN-219ENST00000606213 KRTAP13-4Q3LI77 160 aa9.41□□□□□ -0.9
PTPRN-219ENST00000606213 SPRR2EP22531 72 aa9.4□□□□□ -0.9
PTPRN-219ENST00000606213 SPRR2BP35325 72 aa9.4□□□□□ -0.9
PTPRN-219ENST00000606213 SPRR2AP35326 72 aa9.4□□□□□ -0.9
PTPRN-219ENST00000606213 KRTAP10-7P60409 375 aaPredicted RBP9.39□□□□□ -0.91
PTPRN-219ENST00000606213 KRTAP4-8A0A0G2JLE6 195 aa9.38□□□□□ -0.91
PTPRN-219ENST00000606213 H7BZZ5 65 aa9.38□□□□□ -0.91
PTPRN-219ENST00000606213 KRTAP4-8Q9BYQ9 185 aa9.38□□□□□ -0.91
PTPRN-219ENST00000606213 CAMK2N1Q7Z7J9 78 aa9.37□□□□□ -0.91
PTPRN-219ENST00000606213 KRTAP10-12P60413 245 aa9.33□□□□□ -0.92
PTPRN-219ENST00000606213 CYSTM1Q9H1C7 97 aa9.33□□□□□ -0.92
PTPRN-219ENST00000606213 ANAPC13Q9BS18 74 aa9.31□□□□□ -0.92
PTPRN-219ENST00000606213 KRTAP2-3P0C7H8 128 aa9.29□□□□□ -0.92
PTPRN-219ENST00000606213 KRTAP2-4Q9BYR9 128 aa9.29□□□□□ -0.92
PTPRN-219ENST00000606213 A0A0D9SG42 100 aa9.26□□□□□ -0.93
PTPRN-219ENST00000606213 A0A1B0GU33 70 aa9.23□□□□□ -0.93
PTPRN-219ENST00000606213 LCE1AQ5T7P2 110 aa9.22□□□□□ -0.93
PTPRN-219ENST00000606213 SPATA8Q6RVD6 105 aa9.2□□□□□ -0.94
PTPRN-219ENST00000606213 SPINT4Q6UDR6 99 aa9.14□□□□□ -0.95
PTPRN-219ENST00000606213 A0A1B0GU69 56 aa9.13□□□□□ -0.95
PTPRN-219ENST00000606213 SPRR2DP22532 72 aa9.1□□□□□ -0.95
PTPRN-219ENST00000606213 CCDC179H3BU77 68 aa9.05□□□□□ -0.96
PTPRN-219ENST00000606213 SMIM26A0A096LP01 95 aa9□□□□□ -0.97
PTPRN-219ENST00000606213 ATP5EP56381 51 aaPredicted RBP8.99□□□□□ -0.97
PTPRN-219ENST00000606213 KRTAP2-2Q9BYT5 123 aa8.98□□□□□ -0.97
PTPRN-219ENST00000606213 KRTAP2-1Q9BYU5 128 aa8.98□□□□□ -0.97
PTPRN-219ENST00000606213 KRTAP12-1P59990 96 aa8.97□□□□□ -0.97
PTPRN-219ENST00000606213 PRR15LQ9BU68 103 aa8.92□□□□□ -0.98
PTPRN-219ENST00000606213 A8MU10 97 aa8.86□□□□□ -0.99
PTPRN-219ENST00000606213 LCE3BQ5TA77 95 aa8.82□□□□□ -1
PTPRN-219ENST00000606213 KRTAP19-7Q3SYF9 63 aa8.76□□□□□ -1.01
PTPRN-219ENST00000606213 TMEM258P61165 79 aa8.75□□□□□ -1.01
PTPRN-219ENST00000606213 LINC01558Q9Y6Z2 57 aa8.73□□□□□ -1.01
PTPRN-219ENST00000606213 MT1EP04732 61 aa8.7□□□□□ -1.02
PTPRN-219ENST00000606213 KRTAP19-3Q7Z4W3 81 aa8.64□□□□□ -1.03
PTPRN-219ENST00000606213 TNP1P09430 55 aa8.62□□□□□ -1.03
PTPRN-219ENST00000606213 KRTAP19-5Q3LI72 72 aa8.62□□□□□ -1.03
PTPRN-219ENST00000606213 LCE5AQ5TCM9 118 aa8.62□□□□□ -1.03
PTPRN-219ENST00000606213 UQCR11O14957 56 aa8.58□□□□□ -1.04
PTPRN-219ENST00000606213 C10orf95Q9H7T3 257 aa8.56□□□□□ -1.04
PTPRN-219ENST00000606213 DSTQ03001 7570 aaKnown RBP8.52□□□□□ -1.05
PTPRN-219ENST00000606213 LCE3AQ5TA76 89 aa8.47□□□□□ -1.05
PTPRN-219ENST00000606213 MT1GP13640 62 aa8.46□□□□□ -1.06
PTPRN-219ENST00000606213 PP632Q6XCG6 107 aa8.46□□□□□ -1.06
PTPRN-219ENST00000606213 MIR22HGQ0VDD5 57 aa8.38□□□□□ -1.07
PTPRN-219ENST00000606213 GPR98Q8WXG9 6306 aa8.35□□□□□ -1.07
PTPRN-219ENST00000606213 MT1LQ93083 61 aa8.34□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms