RNA–Protein interactions for RNA: ENST00000605788.5

NOLC1-209, Transcript of nucleolar and coiled-body phosphoprotein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NOLC1, Length 3,932 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOLC1-209ENST00000605788 HSPG2P98160 4391 aa4.45□□□□□ -1.7
NOLC1-209ENST00000605788 FAT3Q8TDW7 4589 aa4.45□□□□□ -1.7
NOLC1-209ENST00000605788 SPINT4Q6UDR6 99 aa4.43□□□□□ -1.7
NOLC1-209ENST00000605788 KMT2CQ8NEZ4 4911 aaKnown RBP4.41□□□□□ -1.7
NOLC1-209ENST00000605788 KRTAP10-8P60410 259 aa4.4□□□□□ -1.7
NOLC1-209ENST00000605788 KRTAP3-3Q9BYR6 98 aa4.4□□□□□ -1.7
NOLC1-209ENST00000605788 RYR2Q92736 4967 aa4.4□□□□□ -1.7
NOLC1-209ENST00000605788 KRTAP10-6P60371 365 aaPredicted RBP4.4□□□□□ -1.7
NOLC1-209ENST00000605788 KRTAP13-4Q3LI77 160 aa4.4□□□□□ -1.7
NOLC1-209ENST00000605788 RPL37P61927 97 aaKnown RBP4.38□□□□□ -1.71
NOLC1-209ENST00000605788 TNXBP22105 4242 aa4.37□□□□□ -1.71
NOLC1-209ENST00000605788 ROMO1P60602 79 aa4.37□□□□□ -1.71
NOLC1-209ENST00000605788 S4R3F8 94 aa4.37□□□□□ -1.71
NOLC1-209ENST00000605788 XP32Q5T750 250 aa4.36□□□□□ -1.71
NOLC1-209ENST00000605788 KRTAP3-2Q9BYR7 98 aa4.36□□□□□ -1.71
NOLC1-209ENST00000605788 P0C880 135 aa4.35□□□□□ -1.71
NOLC1-209ENST00000605788 Q5VSD8 79 aa4.35□□□□□ -1.71
NOLC1-209ENST00000605788 C10orf95Q9H7T3 257 aa4.3□□□□□ -1.72
NOLC1-209ENST00000605788 LPAP08519 4548 aa4.29□□□□□ -1.72
NOLC1-209ENST00000605788 TPRXLQ17RH7 258 aa4.29□□□□□ -1.72
NOLC1-209ENST00000605788 KIAA1109Q2LD37 5005 aa4.27□□□□□ -1.73
NOLC1-209ENST00000605788 KRTAP21-3Q3LHN1 58 aa4.27□□□□□ -1.73
NOLC1-209ENST00000605788 KRTAP12-2P59991 146 aa4.27□□□□□ -1.73
NOLC1-209ENST00000605788 LRP2P98164 4655 aa4.26□□□□□ -1.73
NOLC1-209ENST00000605788 KRTAP17-1Q9BYP8 105 aa4.26□□□□□ -1.73
NOLC1-209ENST00000605788 RYR1P21817 5038 aa4.25□□□□□ -1.73
NOLC1-209ENST00000605788 RYR3Q15413 4870 aa4.25□□□□□ -1.73
NOLC1-209ENST00000605788 MT1HL1P0DM35 61 aa4.21□□□□□ -1.74
NOLC1-209ENST00000605788 KRTAP12-1P59990 96 aa4.21□□□□□ -1.74
NOLC1-209ENST00000605788 M0R2T5 61 aa4.18□□□□□ -1.74
NOLC1-209ENST00000605788 CAMK2N1Q7Z7J9 78 aa4.18□□□□□ -1.74
NOLC1-209ENST00000605788 R4GN34 69 aa4.16□□□□□ -1.74
NOLC1-209ENST00000605788 NDUFAF8A1L188 74 aa4.14□□□□□ -1.75
NOLC1-209ENST00000605788 M0QZ58 72 aa4.13□□□□□ -1.75
NOLC1-209ENST00000605788 ABCA13Q86UQ4 5058 aa4.13□□□□□ -1.75
NOLC1-209ENST00000605788 EPPK1P58107 5090 aaKnown RBP4.09□□□□□ -1.75
NOLC1-209ENST00000605788 KRTAP15-1Q3LI76 137 aa4.08□□□□□ -1.76
NOLC1-209ENST00000605788 LORP23490 312 aaPredicted RBP4.04□□□□□ -1.76
NOLC1-209ENST00000605788 SEC61BP60468 96 aaKnown RBP4.04□□□□□ -1.76
NOLC1-209ENST00000605788 LCE2DQ5TA82 110 aaPredicted RBP4.04□□□□□ -1.76
NOLC1-209ENST00000605788 KRTAP4-5Q9BYR2 181 aa4.03□□□□□ -1.76
NOLC1-209ENST00000605788 MUC17Q685J3 4493 aa3.98□□□□□ -1.77
NOLC1-209ENST00000605788 KRTAP4-1Q9BYQ7 146 aa3.98□□□□□ -1.77
NOLC1-209ENST00000605788 LUZP6Q538Z0 58 aa3.95□□□□□ -1.78
NOLC1-209ENST00000605788 MUC2Q02817 5179 aa3.94□□□□□ -1.78
NOLC1-209ENST00000605788 PLAC4Q8WY50 150 aa3.9□□□□□ -1.78
NOLC1-209ENST00000605788 HERC2O95714 4834 aa3.9□□□□□ -1.79
NOLC1-209ENST00000605788 A0A0A0MQY5 61 aa3.88□□□□□ -1.79
NOLC1-209ENST00000605788 KRTAP19-2Q3LHN2 52 aa3.85□□□□□ -1.79
NOLC1-209ENST00000605788 PP632Q6XCG6 107 aa3.78□□□□□ -1.8
NOLC1-209ENST00000605788 FLGP20930 4061 aaPredicted RBP3.78□□□□□ -1.8
NOLC1-209ENST00000605788 PCLOQ9Y6V0 5065 aa3.76□□□□□ -1.81
NOLC1-209ENST00000605788 FAT4Q6V0I7 4981 aa3.76□□□□□ -1.81
NOLC1-209ENST00000605788 HERC1Q15751 4861 aa3.75□□□□□ -1.81
NOLC1-209ENST00000605788 BIRC6Q9NR09 4857 aa3.74□□□□□ -1.81
NOLC1-209ENST00000605788 TNP1P09430 55 aa3.73□□□□□ -1.81
NOLC1-209ENST00000605788 KRTAP10-10P60014 251 aa3.7□□□□□ -1.82
NOLC1-209ENST00000605788 HMCN2Q8NDA2 5059 aa3.65□□□□□ -1.82
NOLC1-209ENST00000605788 RNF213Q63HN8 5207 aa3.63□□□□□ -1.83
NOLC1-209ENST00000605788 LCE2CQ5TA81 110 aa3.61□□□□□ -1.83
NOLC1-209ENST00000605788 LCE2BO14633 110 aa3.6□□□□□ -1.83
NOLC1-209ENST00000605788 KRTAP19-1Q8IUB9 90 aa3.59□□□□□ -1.83
NOLC1-209ENST00000605788 KRTAP23-1A1A580 65 aa3.58□□□□□ -1.84
NOLC1-209ENST00000605788 SPRR2GQ9BYE4 73 aa3.57□□□□□ -1.84
NOLC1-209ENST00000605788 UBR4Q5T4S7 5183 aa3.56□□□□□ -1.84
NOLC1-209ENST00000605788 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
NOLC1-209ENST00000605788 SPRR5A0A1B0GTR4 108 aa3.54□□□□□ -1.84
NOLC1-209ENST00000605788 MT1HP80294 61 aa3.51□□□□□ -1.85
NOLC1-209ENST00000605788 MT1FP04733 61 aa3.51□□□□□ -1.85
NOLC1-209ENST00000605788 MT2AP02795 61 aa3.49□□□□□ -1.85
NOLC1-209ENST00000605788 KRTAP9-8Q9BYQ0 159 aa3.44□□□□□ -1.86
NOLC1-209ENST00000605788 MT1BP07438 61 aa3.39□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP10-5P60370 271 aa3.39□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP8-1Q8IUC2 63 aa3.39□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP19-8Q3LI54 63 aa3.39□□□□□ -1.87
NOLC1-209ENST00000605788 MT1XP80297 61 aa3.38□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP10-12P60413 245 aa3.36□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP12-3P60328 96 aa3.36□□□□□ -1.87
NOLC1-209ENST00000605788 KRTAP10-7P60409 375 aaPredicted RBP3.34□□□□□ -1.88
NOLC1-209ENST00000605788 LCE2AQ5TA79 106 aaPredicted RBP3.33□□□□□ -1.88
NOLC1-209ENST00000605788 PRO2289Q9P1D8 64 aa3.33□□□□□ -1.88
NOLC1-209ENST00000605788 FSIP2Q5CZC0 6907 aa3.28□□□□□ -1.88
NOLC1-209ENST00000605788 KRTAP9-3Q9BYQ3 159 aa3.28□□□□□ -1.88
NOLC1-209ENST00000605788 USH2AO75445 5202 aa3.28□□□□□ -1.89
NOLC1-209ENST00000605788 KMT2DO14686 5537 aa3.25□□□□□ -1.89
NOLC1-209ENST00000605788 CRCT1Q9UGL9 99 aa3.23□□□□□ -1.89
NOLC1-209ENST00000605788 OBSCNQ5VST9 7968 aa3.22□□□□□ -1.89
NOLC1-209ENST00000605788 KRTAP19-5Q3LI72 72 aa3.2□□□□□ -1.9
NOLC1-209ENST00000605788 INE1O15225 51 aa3.18□□□□□ -1.9
NOLC1-209ENST00000605788 KRTAP4-8A0A0G2JLE6 195 aa3.15□□□□□ -1.91
NOLC1-209ENST00000605788 KRTAP4-8Q9BYQ9 185 aa3.15□□□□□ -1.91
NOLC1-209ENST00000605788 LCE3CQ5T5A8 94 aa3.14□□□□□ -1.91
NOLC1-209ENST00000605788 SYNE1Q8NF91 8797 aaKnown RBP3.11□□□□□ -1.91
NOLC1-209ENST00000605788 KRTAP9-6A8MVA2 160 aa3.07□□□□□ -1.92
NOLC1-209ENST00000605788 KRTAP4-7Q9BYR0 210 aa3.07□□□□□ -1.92
NOLC1-209ENST00000605788 KRTAP19-7Q3SYF9 63 aa3.01□□□□□ -1.93
NOLC1-209ENST00000605788 MT1LQ93083 61 aa2.93□□□□□ -1.94
NOLC1-209ENST00000605788 SSPOA2VEC9 5147 aa2.93□□□□□ -1.94
NOLC1-209ENST00000605788 KRTAP2-3P0C7H8 128 aa2.92□□□□□ -1.94
NOLC1-209ENST00000605788 KRTAP2-4Q9BYR9 128 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 97.5 ms