RNA–Protein interactions for RNA: ENST00000603677.1

SSX2IP-209, Transcript of SSX family member 2 interacting protein, humanhuman

TSL 1 (best) BASIC

Gene SSX2IP, Length 1,149 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IP-209ENST00000603677 MP68P56378 58 aa10.85□□□□□ -0.67
SSX2IP-209ENST00000603677 OCR1Q9BZK8 76 aa10.85□□□□□ -0.67
SSX2IP-209ENST00000603677 LINC00208Q96KT6 92 aa10.8□□□□□ -0.68
SSX2IP-209ENST00000603677 H3BPC8 53 aa10.79□□□□□ -0.68
SSX2IP-209ENST00000603677 SPRR2GQ9BYE4 73 aa10.78□□□□□ -0.68
SSX2IP-209ENST00000603677 NDUFC1O43677 76 aa10.77□□□□□ -0.69
SSX2IP-209ENST00000603677 KLKP1Q107X0 134 aa10.77□□□□□ -0.69
SSX2IP-209ENST00000603677 IMUPQ9GZP8 106 aa10.76□□□□□ -0.69
SSX2IP-209ENST00000603677 CRIPTQ9P021 101 aa10.75□□□□□ -0.69
SSX2IP-209ENST00000603677 H0YAA0 97 aa10.71□□□□□ -0.69
SSX2IP-209ENST00000603677 SCGB1A1P11684 91 aa10.68□□□□□ -0.7
SSX2IP-209ENST00000603677 KRTAP19-8Q3LI54 63 aa10.68□□□□□ -0.7
SSX2IP-209ENST00000603677 Q5VV11 94 aa10.66□□□□□ -0.7
SSX2IP-209ENST00000603677 K7ERU9 68 aa10.59□□□□□ -0.71
SSX2IP-209ENST00000603677 MT1BP07438 61 aa10.57□□□□□ -0.72
SSX2IP-209ENST00000603677 MACF1Q9UPN3 7388 aaKnown RBP10.56□□□□□ -0.72
SSX2IP-209ENST00000603677 SMIM20Q8N5G0 67 aa10.54□□□□□ -0.72
SSX2IP-209ENST00000603677 DMAC1Q96GE9 116 aa10.5□□□□□ -0.73
SSX2IP-209ENST00000603677 A6NN06 94 aa10.47□□□□□ -0.73
SSX2IP-209ENST00000603677 SYNE2Q8WXH0 6885 aaKnown RBP10.45□□□□□ -0.74
SSX2IP-209ENST00000603677 TRAV7A0A075B6U4 112 aa10.42□□□□□ -0.74
SSX2IP-209ENST00000603677 ADM2Q7Z4H4 148 aa10.42□□□□□ -0.74
SSX2IP-209ENST00000603677 MT-ATP8P03928 68 aa10.41□□□□□ -0.74
SSX2IP-209ENST00000603677 C20orf197Q8N268 126 aa10.39□□□□□ -0.75
SSX2IP-209ENST00000603677 KRTAP10-5P60370 271 aa10.38□□□□□ -0.75
SSX2IP-209ENST00000603677 KRTAP6-3Q3LI67 103 aa10.35□□□□□ -0.75
SSX2IP-209ENST00000603677 ACYP2P14621 99 aa10.32□□□□□ -0.76
SSX2IP-209ENST00000603677 SPTSSBQ8NFR3 76 aa10.24□□□□□ -0.77
SSX2IP-209ENST00000603677 R4GN34 69 aa10.24□□□□□ -0.77
SSX2IP-209ENST00000603677 P0C880 135 aa10.17□□□□□ -0.78
SSX2IP-209ENST00000603677 PRO2289Q9P1D8 64 aa10.15□□□□□ -0.78
SSX2IP-209ENST00000603677 PLAC4Q8WY50 150 aa10.14□□□□□ -0.79
SSX2IP-209ENST00000603677 SPANXA2-OT1Q8N9U9 137 aa10.12□□□□□ -0.79
SSX2IP-209ENST00000603677 SERP2Q8N6R1 65 aa10.1□□□□□ -0.79
SSX2IP-209ENST00000603677 M0QZ58 72 aa10.09□□□□□ -0.79
SSX2IP-209ENST00000603677 CHKB-CPT1BH3BT56 60 aa10.06□□□□□ -0.8
SSX2IP-209ENST00000603677 SNURFQ9Y675 71 aa10.06□□□□□ -0.8
SSX2IP-209ENST00000603677 MT1XP80297 61 aa9.95□□□□□ -0.82
SSX2IP-209ENST00000603677 KRTAP5-9P26371 169 aa9.94□□□□□ -0.82
SSX2IP-209ENST00000603677 LINC01554Q52M75 96 aa9.87□□□□□ -0.83
SSX2IP-209ENST00000603677 NEBP20929 6669 aa9.86□□□□□ -0.83
SSX2IP-209ENST00000603677 KRTAP12-2P59991 146 aa9.82□□□□□ -0.84
SSX2IP-209ENST00000603677 COX7CP15954 63 aa9.8□□□□□ -0.84
SSX2IP-209ENST00000603677 MUC12Q9UKN1 5478 aa9.79□□□□□ -0.84
SSX2IP-209ENST00000603677 COA5Q86WW8 74 aa9.7□□□□□ -0.86
SSX2IP-209ENST00000603677 KMT2DO14686 5537 aa9.64□□□□□ -0.87
SSX2IP-209ENST00000603677 SEC61GP60059 68 aa9.62□□□□□ -0.87
SSX2IP-209ENST00000603677 KRTAP8-1Q8IUC2 63 aa9.61□□□□□ -0.87
SSX2IP-209ENST00000603677 H7BZZ5 65 aa9.6□□□□□ -0.87
SSX2IP-209ENST00000603677 SERP1Q9Y6X1 66 aa9.58□□□□□ -0.88
SSX2IP-209ENST00000603677 SPRR2FQ96RM1 72 aa9.57□□□□□ -0.88
SSX2IP-209ENST00000603677 KRTAP20-1Q3LI63 56 aa9.54□□□□□ -0.88
SSX2IP-209ENST00000603677 KRTAP10-12P60413 245 aa9.52□□□□□ -0.89
SSX2IP-209ENST00000603677 KRTAP13-4Q3LI77 160 aa9.51□□□□□ -0.89
SSX2IP-209ENST00000603677 MDN1Q9NU22 5596 aa9.48□□□□□ -0.89
SSX2IP-209ENST00000603677 ANAPC13Q9BS18 74 aa9.47□□□□□ -0.89
SSX2IP-209ENST00000603677 KRTAP10-7P60409 375 aaPredicted RBP9.45□□□□□ -0.9
SSX2IP-209ENST00000603677 CYSTM1Q9H1C7 97 aa9.45□□□□□ -0.9
SSX2IP-209ENST00000603677 KRTAP4-8A0A0G2JLE6 195 aa9.41□□□□□ -0.9
SSX2IP-209ENST00000603677 KRTAP4-8Q9BYQ9 185 aa9.41□□□□□ -0.9
SSX2IP-209ENST00000603677 SPRR2EP22531 72 aa9.4□□□□□ -0.9
SSX2IP-209ENST00000603677 SPRR2BP35325 72 aa9.4□□□□□ -0.9
SSX2IP-209ENST00000603677 SPRR2AP35326 72 aa9.4□□□□□ -0.9
SSX2IP-209ENST00000603677 CAMK2N1Q7Z7J9 78 aa9.4□□□□□ -0.9
SSX2IP-209ENST00000603677 A0A1B0GU33 70 aa9.38□□□□□ -0.91
SSX2IP-209ENST00000603677 KRTAP2-3P0C7H8 128 aa9.33□□□□□ -0.92
SSX2IP-209ENST00000603677 LCE1AQ5T7P2 110 aa9.33□□□□□ -0.92
SSX2IP-209ENST00000603677 KRTAP2-4Q9BYR9 128 aa9.33□□□□□ -0.92
SSX2IP-209ENST00000603677 ATP5EP56381 51 aaPredicted RBP9.27□□□□□ -0.93
SSX2IP-209ENST00000603677 A0A1B0GU69 56 aa9.26□□□□□ -0.93
SSX2IP-209ENST00000603677 SPATA8Q6RVD6 105 aa9.24□□□□□ -0.93
SSX2IP-209ENST00000603677 A0A0D9SG42 100 aa9.22□□□□□ -0.93
SSX2IP-209ENST00000603677 SMIM26A0A096LP01 95 aa9.18□□□□□ -0.94
SSX2IP-209ENST00000603677 CCDC179H3BU77 68 aa9.18□□□□□ -0.94
SSX2IP-209ENST00000603677 SPINT4Q6UDR6 99 aa9.15□□□□□ -0.94
SSX2IP-209ENST00000603677 KRTAP12-1P59990 96 aa9.12□□□□□ -0.95
SSX2IP-209ENST00000603677 SPRR2DP22532 72 aa9.1□□□□□ -0.95
SSX2IP-209ENST00000603677 PRR15LQ9BU68 103 aa9.09□□□□□ -0.95
SSX2IP-209ENST00000603677 KRTAP2-2Q9BYT5 123 aa9.04□□□□□ -0.96
SSX2IP-209ENST00000603677 KRTAP2-1Q9BYU5 128 aa9.04□□□□□ -0.96
SSX2IP-209ENST00000603677 TMEM258P61165 79 aa9□□□□□ -0.97
SSX2IP-209ENST00000603677 LINC01558Q9Y6Z2 57 aa8.97□□□□□ -0.97
SSX2IP-209ENST00000603677 KRTAP19-7Q3SYF9 63 aa8.9□□□□□ -0.98
SSX2IP-209ENST00000603677 A8MU10 97 aa8.89□□□□□ -0.99
SSX2IP-209ENST00000603677 LCE3BQ5TA77 95 aa8.86□□□□□ -0.99
SSX2IP-209ENST00000603677 MT1EP04732 61 aa8.82□□□□□ -1
SSX2IP-209ENST00000603677 LCE5AQ5TCM9 118 aa8.79□□□□□ -1
SSX2IP-209ENST00000603677 UQCR11O14957 56 aa8.78□□□□□ -1
SSX2IP-209ENST00000603677 KRTAP19-3Q7Z4W3 81 aa8.77□□□□□ -1.01
SSX2IP-209ENST00000603677 TNP1P09430 55 aa8.76□□□□□ -1.01
SSX2IP-209ENST00000603677 C10orf95Q9H7T3 257 aa8.68□□□□□ -1.02
SSX2IP-209ENST00000603677 KRTAP19-5Q3LI72 72 aa8.67□□□□□ -1.02
SSX2IP-209ENST00000603677 MT1GP13640 62 aa8.64□□□□□ -1.03
SSX2IP-209ENST00000603677 V9GYY9 64 aa8.61□□□□□ -1.03
SSX2IP-209ENST00000603677 PP632Q6XCG6 107 aa8.6□□□□□ -1.03
SSX2IP-209ENST00000603677 LCE3AQ5TA76 89 aa8.53□□□□□ -1.04
SSX2IP-209ENST00000603677 MIR22HGQ0VDD5 57 aa8.52□□□□□ -1.05
SSX2IP-209ENST00000603677 DSTQ03001 7570 aaKnown RBP8.5□□□□□ -1.05
SSX2IP-209ENST00000603677 Q1T7F1 81 aa8.46□□□□□ -1.06
SSX2IP-209ENST00000603677 K7ERS5 55 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 820.9 ms