RNA–Protein interactions for RNA: ENST00000601665.5

NUP62-223, Transcript of nucleoporin 62, human

TSL 5

Gene NUP62, Length 531 nt, Biotype processed transcript, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NUP62-223	ENST00000601665	KRTAP4-8	Q9BYQ9	185 aa		5.06	□□□□□ -1.6
NUP62-223	ENST00000601665		Q8N9L7	120 aa		5.05	□□□□□ -1.6
NUP62-223	ENST00000601665	KRTAP4-9	Q9BYQ8	210 aa		4.99	□□□□□ -1.61
NUP62-223	ENST00000601665		H0YAA0	97 aa		4.97	□□□□□ -1.61
NUP62-223	ENST00000601665		A0A087WVE0	104 aa		4.96	□□□□□ -1.62
NUP62-223	ENST00000601665	NDUFC1	O43677	76 aa		4.96	□□□□□ -1.62
NUP62-223	ENST00000601665	ADM2	Q7Z4H4	148 aa		4.96	□□□□□ -1.62
NUP62-223	ENST00000601665	NAA38	Q9BRA0	125 aa	Known RBP	4.94	□□□□□ -1.62
NUP62-223	ENST00000601665	UQCR10	Q9UDW1	63 aa		4.94	□□□□□ -1.62
NUP62-223	ENST00000601665	TP53AIP1	Q9HCN2	124 aa		4.91	□□□□□ -1.62
NUP62-223	ENST00000601665		R4GN34	69 aa		4.9	□□□□□ -1.63
NUP62-223	ENST00000601665	TSTD3	H0UI37	97 aa		4.89	□□□□□ -1.63
NUP62-223	ENST00000601665	KRTAP10-7	P60409	375 aa	Predicted RBP	4.89	□□□□□ -1.63
NUP62-223	ENST00000601665	CYP4F30P	Q9H0H9	118 aa		4.87	□□□□□ -1.63
NUP62-223	ENST00000601665	HMCN1	Q96RW7	5635 aa		4.85	□□□□□ -1.63
NUP62-223	ENST00000601665	KRTAP10-12	P60413	245 aa		4.85	□□□□□ -1.63
NUP62-223	ENST00000601665		K7EP34	96 aa		4.83	□□□□□ -1.64
NUP62-223	ENST00000601665		M0QZ58	72 aa		4.83	□□□□□ -1.64
NUP62-223	ENST00000601665	PYY3	Q5JQD4	70 aa		4.83	□□□□□ -1.64
NUP62-223	ENST00000601665	LINC01554	Q52M75	96 aa		4.82	□□□□□ -1.64
NUP62-223	ENST00000601665		H3BT86	120 aa		4.81	□□□□□ -1.64
NUP62-223	ENST00000601665	C20orf197	Q8N268	126 aa		4.81	□□□□□ -1.64
NUP62-223	ENST00000601665		M0R143	59 aa		4.8	□□□□□ -1.64
NUP62-223	ENST00000601665	UBL5	Q9BZL1	73 aa		4.8	□□□□□ -1.64
NUP62-223	ENST00000601665	LCE1D	Q5T752	114 aa		4.79	□□□□□ -1.64
NUP62-223	ENST00000601665	AHNAK2	Q8IVF2	5795 aa		4.79	□□□□□ -1.64
NUP62-223	ENST00000601665	LOC101927531	A0A1B0GV80	90 aa		4.78	□□□□□ -1.64
NUP62-223	ENST00000601665	ACYP1	P07311	99 aa		4.78	□□□□□ -1.64
NUP62-223	ENST00000601665	TRAV22	A0A0B4J277	110 aa		4.76	□□□□□ -1.65
NUP62-223	ENST00000601665		P0C880	135 aa		4.73	□□□□□ -1.65
NUP62-223	ENST00000601665	MT4	P47944	62 aa		4.72	□□□□□ -1.65
NUP62-223	ENST00000601665	LCE5A	Q5TCM9	118 aa		4.71	□□□□□ -1.66
NUP62-223	ENST00000601665	BATF	Q16520	125 aa		4.69	□□□□□ -1.66
NUP62-223	ENST00000601665	SPCS1	Q9Y6A9	102 aa		4.68	□□□□□ -1.66
NUP62-223	ENST00000601665	KRTAP5-10	Q6L8G5	202 aa		4.67	□□□□□ -1.66
NUP62-223	ENST00000601665	LCE4A	Q5TA78	99 aa		4.66	□□□□□ -1.66
NUP62-223	ENST00000601665	KRTAP19-3	Q7Z4W3	81 aa		4.65	□□□□□ -1.67
NUP62-223	ENST00000601665	MT-ATP8	P03928	68 aa		4.63	□□□□□ -1.67
NUP62-223	ENST00000601665	CYSTM1	Q9H1C7	97 aa		4.63	□□□□□ -1.67
NUP62-223	ENST00000601665	ATOX1	O00244	68 aa		4.62	□□□□□ -1.67
NUP62-223	ENST00000601665		A0A1W2PPM0	123 aa		4.61	□□□□□ -1.67
NUP62-223	ENST00000601665	C9orf118	A6NHY6	69 aa		4.6	□□□□□ -1.67
NUP62-223	ENST00000601665		H0Y9P7	68 aa		4.6	□□□□□ -1.67
NUP62-223	ENST00000601665	MT1E	P04732	61 aa		4.58	□□□□□ -1.68
NUP62-223	ENST00000601665	KRTAP19-7	Q3SYF9	63 aa		4.57	□□□□□ -1.68
NUP62-223	ENST00000601665	UQCRQ	O14949	82 aa		4.56	□□□□□ -1.68
NUP62-223	ENST00000601665	KRTAP5-7	Q6L8G8	165 aa		4.56	□□□□□ -1.68
NUP62-223	ENST00000601665	TAX1BP3	O14907	124 aa		4.53	□□□□□ -1.68
NUP62-223	ENST00000601665	PP632	Q6XCG6	107 aa		4.52	□□□□□ -1.69
NUP62-223	ENST00000601665	SPRR5	A0A1B0GTR4	108 aa		4.5	□□□□□ -1.69
NUP62-223	ENST00000601665	MT1G	P13640	62 aa		4.49	□□□□□ -1.69
NUP62-223	ENST00000601665	LINC00208	Q96KT6	92 aa		4.49	□□□□□ -1.69
NUP62-223	ENST00000601665	KRTAP4-6	Q9BYQ5	205 aa		4.48	□□□□□ -1.69
NUP62-223	ENST00000601665	TMA7	Q9Y2S6	64 aa	Known RBP	4.48	□□□□□ -1.69
NUP62-223	ENST00000601665	KRTAP5-3	Q6L8H2	238 aa		4.46	□□□□□ -1.7
NUP62-223	ENST00000601665	CAMK2N1	Q7Z7J9	78 aa		4.46	□□□□□ -1.7
NUP62-223	ENST00000601665	HIST1H4A	P62805	103 aa	Known RBP	4.43	□□□□□ -1.7
NUP62-223	ENST00000601665	KRTAP5-4	Q6L8H1	288 aa		4.43	□□□□□ -1.7
NUP62-223	ENST00000601665	MP68	P56378	58 aa		4.42	□□□□□ -1.7
NUP62-223	ENST00000601665	PRO0461	Q9UI25	63 aa		4.41	□□□□□ -1.7
NUP62-223	ENST00000601665	MT1M	Q8N339	61 aa		4.4	□□□□□ -1.71
NUP62-223	ENST00000601665	DMAC1	Q96GE9	116 aa		4.38	□□□□□ -1.71
NUP62-223	ENST00000601665	KRTAP19-5	Q3LI72	72 aa		4.37	□□□□□ -1.71
NUP62-223	ENST00000601665		A0A0D9SG42	100 aa		4.34	□□□□□ -1.71
NUP62-223	ENST00000601665	SMIM6	P0DI80	62 aa		4.33	□□□□□ -1.72
NUP62-223	ENST00000601665	ATP5EP2	Q5VTU8	51 aa		4.33	□□□□□ -1.72
NUP62-223	ENST00000601665	SPTSSB	Q8NFR3	76 aa		4.32	□□□□□ -1.72
NUP62-223	ENST00000601665	KRTAP4-3	Q9BYR4	195 aa		4.31	□□□□□ -1.72
NUP62-223	ENST00000601665	TRAV7	A0A075B6U4	112 aa		4.3	□□□□□ -1.72
NUP62-223	ENST00000601665	ETDB	Q3ZM63	59 aa		4.29	□□□□□ -1.72
NUP62-223	ENST00000601665	MT1L	Q93083	61 aa		4.29	□□□□□ -1.72
NUP62-223	ENST00000601665	KRTAP20-2	Q3LI61	65 aa		4.25	□□□□□ -1.73
NUP62-223	ENST00000601665		F8W1H4	67 aa		4.24	□□□□□ -1.73
NUP62-223	ENST00000601665	OCR1	Q9BZK8	76 aa		4.24	□□□□□ -1.73
NUP62-223	ENST00000601665		H3BPC8	53 aa		4.23	□□□□□ -1.73
NUP62-223	ENST00000601665	ACYP2	P14621	99 aa		4.23	□□□□□ -1.73
NUP62-223	ENST00000601665	GTF2H5	Q6ZYL4	71 aa		4.23	□□□□□ -1.73
NUP62-223	ENST00000601665	CHKB-CPT1B	H3BT56	60 aa		4.21	□□□□□ -1.74
NUP62-223	ENST00000601665	COL5A1-AS1	Q5SY13	56 aa		4.21	□□□□□ -1.74
NUP62-223	ENST00000601665	KRTAP13-4	Q3LI77	160 aa		4.2	□□□□□ -1.74
NUP62-223	ENST00000601665	AHNAK	Q09666	5890 aa	Known RBP	4.17	□□□□□ -1.74
NUP62-223	ENST00000601665	FAM240A	A0A1B0GVK7	77 aa		4.16	□□□□□ -1.74
NUP62-223	ENST00000601665	KRTAP12-4	P60329	112 aa		4.15	□□□□□ -1.75
NUP62-223	ENST00000601665	LINC00643	Q86TS7	51 aa		4.11	□□□□□ -1.75
NUP62-223	ENST00000601665	C10orf95	Q9H7T3	257 aa		4.11	□□□□□ -1.75
NUP62-223	ENST00000601665	SPINT4	Q6UDR6	99 aa		4.1	□□□□□ -1.75
NUP62-223	ENST00000601665	SCGB1A1	P11684	91 aa		4.08	□□□□□ -1.76
NUP62-223	ENST00000601665	KRTAP4-7	Q9BYR0	210 aa		4.06	□□□□□ -1.76
NUP62-223	ENST00000601665	MUC5AC	P98088	5654 aa		4.06	□□□□□ -1.76
NUP62-223	ENST00000601665	SYNE1	Q8NF91	8797 aa	Known RBP	4.05	□□□□□ -1.76
NUP62-223	ENST00000601665	MUC5B	Q9HC84	5762 aa	Predicted RBP	4.04	□□□□□ -1.76
NUP62-223	ENST00000601665	LCE3A	Q5TA76	89 aa		4.04	□□□□□ -1.76
NUP62-223	ENST00000601665	KRTAP5-5	Q701N2	237 aa	Predicted RBP	4.03	□□□□□ -1.76
NUP62-223	ENST00000601665	KRTAP4-11	Q9BYQ6	195 aa		4.01	□□□□□ -1.77
NUP62-223	ENST00000601665	SPATA8	Q6RVD6	105 aa		3.96	□□□□□ -1.78
NUP62-223	ENST00000601665	TNP1	P09430	55 aa		3.95	□□□□□ -1.78
NUP62-223	ENST00000601665	SEC61G	P60059	68 aa		3.94	□□□□□ -1.78
NUP62-223	ENST00000601665	KRTAP12-1	P59990	96 aa		3.93	□□□□□ -1.78
NUP62-223	ENST00000601665	SERP1	Q9Y6X1	66 aa		3.93	□□□□□ -1.78
NUP62-223	ENST00000601665	KRTAP12-3	P60328	96 aa		3.9	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 65.6 ms