RNA–Protein interactions for RNA: ENST00000601614.6

SSBP4-211, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 2

Gene SSBP4, Length 628 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-211ENST00000601614 A0A1W2PPM0 123 aa6.68□□□□□ -1.34
SSBP4-211ENST00000601614 PDE6GP18545 87 aa6.68□□□□□ -1.34
SSBP4-211ENST00000601614 KRTAP4-8Q9BYQ9 185 aa6.68□□□□□ -1.34
SSBP4-211ENST00000601614 PCP4L1A6NKN8 68 aa6.67□□□□□ -1.34
SSBP4-211ENST00000601614 H3BT86 120 aa6.66□□□□□ -1.34
SSBP4-211ENST00000601614 PRO2289Q9P1D8 64 aa6.66□□□□□ -1.34
SSBP4-211ENST00000601614 GPR98Q8WXG9 6306 aa6.66□□□□□ -1.34
SSBP4-211ENST00000601614 KRTAP12-2P59991 146 aa6.64□□□□□ -1.35
SSBP4-211ENST00000601614 CASC2Q6XLA1 102 aa6.63□□□□□ -1.35
SSBP4-211ENST00000601614 Q8N9L7 120 aa6.62□□□□□ -1.35
SSBP4-211ENST00000601614 CXCL6P80162 114 aa6.61□□□□□ -1.35
SSBP4-211ENST00000601614 A0A087WVE0 104 aa6.6□□□□□ -1.35
SSBP4-211ENST00000601614 SPCS1Q9Y6A9 102 aa6.59□□□□□ -1.35
SSBP4-211ENST00000601614 BPY2O14599 106 aa6.58□□□□□ -1.36
SSBP4-211ENST00000601614 PRO0461Q9UI25 63 aa6.52□□□□□ -1.37
SSBP4-211ENST00000601614 COL5A1-AS1Q5SY13 56 aa6.5□□□□□ -1.37
SSBP4-211ENST00000601614 A8MUN3 132 aa6.49□□□□□ -1.37
SSBP4-211ENST00000601614 K7EP34 96 aa6.49□□□□□ -1.37
SSBP4-211ENST00000601614 DSTQ03001 7570 aaKnown RBP6.47□□□□□ -1.37
SSBP4-211ENST00000601614 PLAC4Q8WY50 150 aa6.46□□□□□ -1.38
SSBP4-211ENST00000601614 KRTAP4-9Q9BYQ8 210 aa6.46□□□□□ -1.38
SSBP4-211ENST00000601614 H0YAA0 97 aa6.45□□□□□ -1.38
SSBP4-211ENST00000601614 KRTAP10-7P60409 375 aaPredicted RBP6.44□□□□□ -1.38
SSBP4-211ENST00000601614 ADM2Q7Z4H4 148 aa6.4□□□□□ -1.38
SSBP4-211ENST00000601614 UBL5Q9BZL1 73 aa6.39□□□□□ -1.39
SSBP4-211ENST00000601614 KRTAP10-12P60413 245 aa6.37□□□□□ -1.39
SSBP4-211ENST00000601614 CYP4F30PQ9H0H9 118 aa6.35□□□□□ -1.39
SSBP4-211ENST00000601614 GTF2H5Q6ZYL4 71 aa6.34□□□□□ -1.39
SSBP4-211ENST00000601614 A0A1B0GV90 55 aa6.33□□□□□ -1.4
SSBP4-211ENST00000601614 ETDBQ3ZM63 59 aa6.33□□□□□ -1.4
SSBP4-211ENST00000601614 NDUFC1O43677 76 aa6.32□□□□□ -1.4
SSBP4-211ENST00000601614 F8W1H4 67 aa6.3□□□□□ -1.4
SSBP4-211ENST00000601614 TP53AIP1Q9HCN2 124 aa6.29□□□□□ -1.4
SSBP4-211ENST00000601614 R4GN34 69 aa6.24□□□□□ -1.41
SSBP4-211ENST00000601614 LCE1DQ5T752 114 aa6.23□□□□□ -1.41
SSBP4-211ENST00000601614 P0C880 135 aa6.22□□□□□ -1.41
SSBP4-211ENST00000601614 M0QZ58 72 aa6.19□□□□□ -1.42
SSBP4-211ENST00000601614 LCE5AQ5TCM9 118 aa6.17□□□□□ -1.42
SSBP4-211ENST00000601614 LOC101927531A0A1B0GV80 90 aa6.16□□□□□ -1.42
SSBP4-211ENST00000601614 LINC01554Q52M75 96 aa6.15□□□□□ -1.42
SSBP4-211ENST00000601614 TRAV22A0A0B4J277 110 aa6.13□□□□□ -1.43
SSBP4-211ENST00000601614 FAM240AA0A1B0GVK7 77 aa6.13□□□□□ -1.43
SSBP4-211ENST00000601614 ACYP1P07311 99 aa6.12□□□□□ -1.43
SSBP4-211ENST00000601614 ATP5EP2Q5VTU8 51 aa6.11□□□□□ -1.43
SSBP4-211ENST00000601614 KRTAP5-10Q6L8G5 202 aa6.09□□□□□ -1.43
SSBP4-211ENST00000601614 HMCN1Q96RW7 5635 aa6.09□□□□□ -1.43
SSBP4-211ENST00000601614 HIST1H4AP62805 103 aaKnown RBP6.08□□□□□ -1.44
SSBP4-211ENST00000601614 MT4P47944 62 aa6.07□□□□□ -1.44
SSBP4-211ENST00000601614 KRTAP3-2Q9BYR7 98 aa6.07□□□□□ -1.44
SSBP4-211ENST00000601614 KRTAP19-3Q7Z4W3 81 aa6.06□□□□□ -1.44
SSBP4-211ENST00000601614 AHNAK2Q8IVF2 5795 aa6.05□□□□□ -1.44
SSBP4-211ENST00000601614 K7ERU9 68 aa6.05□□□□□ -1.44
SSBP4-211ENST00000601614 KRTAP19-7Q3SYF9 63 aa6.05□□□□□ -1.44
SSBP4-211ENST00000601614 C20orf197Q8N268 126 aa6.04□□□□□ -1.44
SSBP4-211ENST00000601614 H0Y9P7 68 aa6.03□□□□□ -1.44
SSBP4-211ENST00000601614 UQCRQO14949 82 aa6.02□□□□□ -1.45
SSBP4-211ENST00000601614 MT1EP04732 61 aa6□□□□□ -1.45
SSBP4-211ENST00000601614 LCE4AQ5TA78 99 aa6□□□□□ -1.45
SSBP4-211ENST00000601614 LINC00643Q86TS7 51 aa6□□□□□ -1.45
SSBP4-211ENST00000601614 PCP4P48539 62 aa5.99□□□□□ -1.45
SSBP4-211ENST00000601614 J3QR89 54 aa5.96□□□□□ -1.46
SSBP4-211ENST00000601614 ATOX1O00244 68 aa5.96□□□□□ -1.46
SSBP4-211ENST00000601614 CYSTM1Q9H1C7 97 aa5.96□□□□□ -1.46
SSBP4-211ENST00000601614 SVIPQ8NHG7 77 aa5.94□□□□□ -1.46
SSBP4-211ENST00000601614 OCR1Q9BZK8 76 aa5.93□□□□□ -1.46
SSBP4-211ENST00000601614 LINC00208Q96KT6 92 aa5.92□□□□□ -1.46
SSBP4-211ENST00000601614 SCGB1A1P11684 91 aa5.9□□□□□ -1.46
SSBP4-211ENST00000601614 KRTAP5-7Q6L8G8 165 aa5.9□□□□□ -1.46
SSBP4-211ENST00000601614 KRTAP4-6Q9BYQ5 205 aa5.87□□□□□ -1.47
SSBP4-211ENST00000601614 MT-ATP8P03928 68 aa5.84□□□□□ -1.47
SSBP4-211ENST00000601614 MP68P56378 58 aa5.84□□□□□ -1.47
SSBP4-211ENST00000601614 KRTAP5-4Q6L8H1 288 aa5.84□□□□□ -1.47
SSBP4-211ENST00000601614 MT1GP13640 62 aa5.82□□□□□ -1.48
SSBP4-211ENST00000601614 KRTAP5-3Q6L8H2 238 aa5.8□□□□□ -1.48
SSBP4-211ENST00000601614 H3BPC8 53 aa5.76□□□□□ -1.49
SSBP4-211ENST00000601614 MT1MQ8N339 61 aa5.76□□□□□ -1.49
SSBP4-211ENST00000601614 DMAC1Q96GE9 116 aa5.75□□□□□ -1.49
SSBP4-211ENST00000601614 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
SSBP4-211ENST00000601614 KRTAP19-5Q3LI72 72 aa5.72□□□□□ -1.49
SSBP4-211ENST00000601614 KRTAP4-3Q9BYR4 195 aa5.7□□□□□ -1.5
SSBP4-211ENST00000601614 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
SSBP4-211ENST00000601614 MT1LQ93083 61 aa5.64□□□□□ -1.51
SSBP4-211ENST00000601614 CAMK2N1Q7Z7J9 78 aa5.63□□□□□ -1.51
SSBP4-211ENST00000601614 TRAV7A0A075B6U4 112 aa5.61□□□□□ -1.51
SSBP4-211ENST00000601614 A0A0D9SG42 100 aa5.6□□□□□ -1.51
SSBP4-211ENST00000601614 KRTAP13-4Q3LI77 160 aa5.6□□□□□ -1.51
SSBP4-211ENST00000601614 ANAPC13Q9BS18 74 aa5.59□□□□□ -1.51
SSBP4-211ENST00000601614 SMIM20Q8N5G0 67 aa5.56□□□□□ -1.52
SSBP4-211ENST00000601614 KRTAP20-2Q3LI61 65 aa5.55□□□□□ -1.52
SSBP4-211ENST00000601614 ACYP2P14621 99 aa5.54□□□□□ -1.52
SSBP4-211ENST00000601614 SNURFQ9Y675 71 aa5.54□□□□□ -1.52
SSBP4-211ENST00000601614 CHKB-CPT1BH3BT56 60 aa5.46□□□□□ -1.54
SSBP4-211ENST00000601614 SPTSSBQ8NFR3 76 aa5.45□□□□□ -1.54
SSBP4-211ENST00000601614 SPANXA2-OT1Q8N9U9 137 aa5.42□□□□□ -1.54
SSBP4-211ENST00000601614 SERP2Q8N6R1 65 aa5.41□□□□□ -1.54
SSBP4-211ENST00000601614 KRTAP4-7Q9BYR0 210 aa5.4□□□□□ -1.54
SSBP4-211ENST00000601614 CCDC179H3BU77 68 aa5.39□□□□□ -1.55
SSBP4-211ENST00000601614 COX7CP15954 63 aa5.37□□□□□ -1.55
SSBP4-211ENST00000601614 KRTAP5-5Q701N2 237 aaPredicted RBP5.36□□□□□ -1.55
SSBP4-211ENST00000601614 C10orf95Q9H7T3 257 aa5.35□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms