RNA–Protein interactions for RNA: ENST00000600970.5

USE1-208, Transcript of unconventional SNARE in the ER 1, humanhuman

TSL 5

Gene USE1, Length 826 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USE1-208ENST00000600970 SPRR2DP22532 72 aa7.06□□□□□ -1.28
USE1-208ENST00000600970 PRO2289Q9P1D8 64 aa7.05□□□□□ -1.28
USE1-208ENST00000600970 MT1XP80297 61 aa7.04□□□□□ -1.28
USE1-208ENST00000600970 PCP4L1A6NKN8 68 aa7.03□□□□□ -1.28
USE1-208ENST00000600970 A0A087WVE0 104 aa7.02□□□□□ -1.29
USE1-208ENST00000600970 H3BT86 120 aa7□□□□□ -1.29
USE1-208ENST00000600970 KRTAP12-2P59991 146 aa6.96□□□□□ -1.3
USE1-208ENST00000600970 A8MUN3 132 aa6.93□□□□□ -1.3
USE1-208ENST00000600970 H0YAA0 97 aa6.93□□□□□ -1.3
USE1-208ENST00000600970 KRTAP4-8A0A0G2JLE6 195 aa6.92□□□□□ -1.3
USE1-208ENST00000600970 KRTAP4-8Q9BYQ9 185 aa6.92□□□□□ -1.3
USE1-208ENST00000600970 TP53AIP1Q9HCN2 124 aa6.92□□□□□ -1.3
USE1-208ENST00000600970 LCE3BQ5TA77 95 aa6.91□□□□□ -1.3
USE1-208ENST00000600970 TAX1BP3O14907 124 aa6.9□□□□□ -1.3
USE1-208ENST00000600970 C9orf118A6NHY6 69 aa6.89□□□□□ -1.31
USE1-208ENST00000600970 PLAC4Q8WY50 150 aa6.89□□□□□ -1.31
USE1-208ENST00000600970 CYP4F30PQ9H0H9 118 aa6.89□□□□□ -1.31
USE1-208ENST00000600970 COL5A1-AS1Q5SY13 56 aa6.88□□□□□ -1.31
USE1-208ENST00000600970 NDUFC1O43677 76 aa6.85□□□□□ -1.31
USE1-208ENST00000600970 ADM2Q7Z4H4 148 aa6.85□□□□□ -1.31
USE1-208ENST00000600970 UBL5Q9BZL1 73 aa6.85□□□□□ -1.31
USE1-208ENST00000600970 A0A1W2PPM0 123 aa6.84□□□□□ -1.31
USE1-208ENST00000600970 K7EP34 96 aa6.79□□□□□ -1.32
USE1-208ENST00000600970 SPCS1Q9Y6A9 102 aa6.79□□□□□ -1.32
USE1-208ENST00000600970 LOC101927531A0A1B0GV80 90 aa6.75□□□□□ -1.33
USE1-208ENST00000600970 GPR98Q8WXG9 6306 aa6.72□□□□□ -1.33
USE1-208ENST00000600970 TRAV22A0A0B4J277 110 aa6.72□□□□□ -1.33
USE1-208ENST00000600970 KRTAP10-7P60409 375 aaPredicted RBP6.72□□□□□ -1.33
USE1-208ENST00000600970 R4GN34 69 aa6.71□□□□□ -1.34
USE1-208ENST00000600970 GTF2H5Q6ZYL4 71 aa6.69□□□□□ -1.34
USE1-208ENST00000600970 KRTAP10-12P60413 245 aa6.68□□□□□ -1.34
USE1-208ENST00000600970 ACYP1P07311 99 aa6.66□□□□□ -1.34
USE1-208ENST00000600970 DSTQ03001 7570 aaKnown RBP6.64□□□□□ -1.35
USE1-208ENST00000600970 P0C880 135 aa6.64□□□□□ -1.35
USE1-208ENST00000600970 M0QZ58 72 aa6.63□□□□□ -1.35
USE1-208ENST00000600970 PRO0461Q9UI25 63 aa6.63□□□□□ -1.35
USE1-208ENST00000600970 A0A1B0GV90 55 aa6.62□□□□□ -1.35
USE1-208ENST00000600970 F8W1H4 67 aa6.59□□□□□ -1.35
USE1-208ENST00000600970 KRTAP4-9Q9BYQ8 210 aa6.58□□□□□ -1.36
USE1-208ENST00000600970 LINC01554Q52M75 96 aa6.57□□□□□ -1.36
USE1-208ENST00000600970 C20orf197Q8N268 126 aa6.57□□□□□ -1.36
USE1-208ENST00000600970 H0Y9P7 68 aa6.56□□□□□ -1.36
USE1-208ENST00000600970 ETDBQ3ZM63 59 aa6.55□□□□□ -1.36
USE1-208ENST00000600970 ATOX1O00244 68 aa6.53□□□□□ -1.36
USE1-208ENST00000600970 UQCRQO14949 82 aa6.52□□□□□ -1.37
USE1-208ENST00000600970 LCE5AQ5TCM9 118 aa6.41□□□□□ -1.38
USE1-208ENST00000600970 LINC00208Q96KT6 92 aa6.41□□□□□ -1.38
USE1-208ENST00000600970 HIST1H4AP62805 103 aaKnown RBP6.37□□□□□ -1.39
USE1-208ENST00000600970 LCE1DQ5T752 114 aa6.36□□□□□ -1.39
USE1-208ENST00000600970 MT-ATP8P03928 68 aa6.33□□□□□ -1.4
USE1-208ENST00000600970 KRTAP19-3Q7Z4W3 81 aa6.32□□□□□ -1.4
USE1-208ENST00000600970 LOC100996750A0A140TA64 210 aa6.31□□□□□ -1.4
USE1-208ENST00000600970 KRTAP19-7Q3SYF9 63 aa6.31□□□□□ -1.4
USE1-208ENST00000600970 KRTAP4-6Q9BYQ5 205 aa6.31□□□□□ -1.4
USE1-208ENST00000600970 FAM240AA0A1B0GVK7 77 aa6.3□□□□□ -1.4
USE1-208ENST00000600970 ATP5EP2Q5VTU8 51 aa6.3□□□□□ -1.4
USE1-208ENST00000600970 J3QR89 54 aa6.29□□□□□ -1.4
USE1-208ENST00000600970 MT1EP04732 61 aa6.27□□□□□ -1.41
USE1-208ENST00000600970 MP68P56378 58 aa6.27□□□□□ -1.41
USE1-208ENST00000600970 DMAC1Q96GE9 116 aa6.27□□□□□ -1.41
USE1-208ENST00000600970 MT4P47944 62 aa6.22□□□□□ -1.41
USE1-208ENST00000600970 LINC00643Q86TS7 51 aa6.22□□□□□ -1.41
USE1-208ENST00000600970 OCR1Q9BZK8 76 aa6.22□□□□□ -1.41
USE1-208ENST00000600970 HMCN1Q96RW7 5635 aa6.22□□□□□ -1.41
USE1-208ENST00000600970 CYSTM1Q9H1C7 97 aa6.21□□□□□ -1.42
USE1-208ENST00000600970 LCE4AQ5TA78 99 aa6.2□□□□□ -1.42
USE1-208ENST00000600970 K7ERU9 68 aa6.19□□□□□ -1.42
USE1-208ENST00000600970 AHNAK2Q8IVF2 5795 aa6.17□□□□□ -1.42
USE1-208ENST00000600970 KRTAP5-10Q6L8G5 202 aa6.15□□□□□ -1.42
USE1-208ENST00000600970 TRAV7A0A075B6U4 112 aa6.12□□□□□ -1.43
USE1-208ENST00000600970 H3BPC8 53 aa6.12□□□□□ -1.43
USE1-208ENST00000600970 MT1GP13640 62 aa6.11□□□□□ -1.43
USE1-208ENST00000600970 CAMK2N1Q7Z7J9 78 aa6.08□□□□□ -1.44
USE1-208ENST00000600970 PP632Q6XCG6 107 aa6.05□□□□□ -1.44
USE1-208ENST00000600970 SPTSSBQ8NFR3 76 aa6.04□□□□□ -1.44
USE1-208ENST00000600970 ACYP2P14621 99 aa6.03□□□□□ -1.44
USE1-208ENST00000600970 SCGB1A1P11684 91 aa6.02□□□□□ -1.45
USE1-208ENST00000600970 KRTAP5-4Q6L8H1 288 aa6.02□□□□□ -1.45
USE1-208ENST00000600970 KRTAP19-5Q3LI72 72 aa6.01□□□□□ -1.45
USE1-208ENST00000600970 KRTAP13-4Q3LI77 160 aa6.01□□□□□ -1.45
USE1-208ENST00000600970 MT1MQ8N339 61 aa6.01□□□□□ -1.45
USE1-208ENST00000600970 KRTAP5-7Q6L8G8 165 aa5.97□□□□□ -1.45
USE1-208ENST00000600970 A0A0D9SG42 100 aa5.96□□□□□ -1.46
USE1-208ENST00000600970 MT1LQ93083 61 aa5.91□□□□□ -1.46
USE1-208ENST00000600970 CHKB-CPT1BH3BT56 60 aa5.9□□□□□ -1.46
USE1-208ENST00000600970 KRTAP4-3Q9BYR4 195 aa5.9□□□□□ -1.46
USE1-208ENST00000600970 KRTAP5-3Q6L8H2 238 aa5.89□□□□□ -1.47
USE1-208ENST00000600970 SMIM20Q8N5G0 67 aa5.84□□□□□ -1.47
USE1-208ENST00000600970 SERP2Q8N6R1 65 aa5.75□□□□□ -1.49
USE1-208ENST00000600970 SNURFQ9Y675 71 aa5.75□□□□□ -1.49
USE1-208ENST00000600970 SPRR5A0A1B0GTR4 108 aa5.71□□□□□ -1.5
USE1-208ENST00000600970 KRTAP20-2Q3LI61 65 aa5.71□□□□□ -1.5
USE1-208ENST00000600970 SPINT4Q6UDR6 99 aa5.7□□□□□ -1.5
USE1-208ENST00000600970 C10orf95Q9H7T3 257 aa5.68□□□□□ -1.5
USE1-208ENST00000600970 ANAPC13Q9BS18 74 aa5.67□□□□□ -1.5
USE1-208ENST00000600970 COX7CP15954 63 aa5.66□□□□□ -1.5
USE1-208ENST00000600970 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
USE1-208ENST00000600970 SPATA8Q6RVD6 105 aa5.64□□□□□ -1.51
USE1-208ENST00000600970 KRTAP12-1P59990 96 aa5.63□□□□□ -1.51
USE1-208ENST00000600970 KRTAP4-7Q9BYR0 210 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms