RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 P0C880 135 aa9.56□□□□□ -0.88
ARHGEF1-221ENST00000600387 A0A0D9SG42 100 aa9.56□□□□□ -0.88
ARHGEF1-221ENST00000600387 DYNC1H1Q14204 4646 aaKnown RBP9.54□□□□□ -0.88
ARHGEF1-221ENST00000600387 S4R3F8 94 aa9.52□□□□□ -0.89
ARHGEF1-221ENST00000600387 TPRXLQ17RH7 258 aa9.51□□□□□ -0.89
ARHGEF1-221ENST00000600387 FAT1Q14517 4588 aa9.49□□□□□ -0.89
ARHGEF1-221ENST00000600387 A0A1B0GVY2 172 aa9.48□□□□□ -0.89
ARHGEF1-221ENST00000600387 SPINT4Q6UDR6 99 aa9.46□□□□□ -0.9
ARHGEF1-221ENST00000600387 DMBT1Q9UGM3 2413 aaPredicted RBP9.46□□□□□ -0.9
ARHGEF1-221ENST00000600387 KRTAP10-8P60410 259 aa9.39□□□□□ -0.91
ARHGEF1-221ENST00000600387 FAT3Q8TDW7 4589 aa9.38□□□□□ -0.91
ARHGEF1-221ENST00000600387 C10orf95Q9H7T3 257 aa9.36□□□□□ -0.91
ARHGEF1-221ENST00000600387 XP32Q5T750 250 aa9.35□□□□□ -0.91
ARHGEF1-221ENST00000600387 KRTAP12-2P59991 146 aa9.33□□□□□ -0.92
ARHGEF1-221ENST00000600387 TNXBP22105 4242 aa9.32□□□□□ -0.92
ARHGEF1-221ENST00000600387 LRP1Q07954 4544 aaKnown RBP9.3□□□□□ -0.92
ARHGEF1-221ENST00000600387 HSPG2P98160 4391 aa9.28□□□□□ -0.92
ARHGEF1-221ENST00000600387 KRTAP15-1Q3LI76 137 aa9.28□□□□□ -0.92
ARHGEF1-221ENST00000600387 KRTAP12-1P59990 96 aa9.26□□□□□ -0.93
ARHGEF1-221ENST00000600387 M0QZ58 72 aa9.19□□□□□ -0.94
ARHGEF1-221ENST00000600387 NDUFAF8A1L188 74 aa9.14□□□□□ -0.95
ARHGEF1-221ENST00000600387 Q5VSD8 79 aa9.1□□□□□ -0.95
ARHGEF1-221ENST00000600387 MYCBP2O75592 4640 aa9□□□□□ -0.97
ARHGEF1-221ENST00000600387 RYR2Q92736 4967 aa9□□□□□ -0.97
ARHGEF1-221ENST00000600387 MT1HL1P0DM35 61 aa8.9□□□□□ -0.98
ARHGEF1-221ENST00000600387 R4GN34 69 aa8.85□□□□□ -0.99
ARHGEF1-221ENST00000600387 KMT2CQ8NEZ4 4911 aaKnown RBP8.84□□□□□ -0.99
ARHGEF1-221ENST00000600387 LPAP08519 4548 aa8.84□□□□□ -1
ARHGEF1-221ENST00000600387 KRTAP17-1Q9BYP8 105 aa8.75□□□□□ -1.01
ARHGEF1-221ENST00000600387 LRP2P98164 4655 aa8.75□□□□□ -1.01
ARHGEF1-221ENST00000600387 RYR1P21817 5038 aa8.75□□□□□ -1.01
ARHGEF1-221ENST00000600387 PLAC4Q8WY50 150 aa8.72□□□□□ -1.01
ARHGEF1-221ENST00000600387 RYR3Q15413 4870 aa8.69□□□□□ -1.02
ARHGEF1-221ENST00000600387 LORP23490 312 aaPredicted RBP8.6□□□□□ -1.03
ARHGEF1-221ENST00000600387 PP632Q6XCG6 107 aa8.57□□□□□ -1.04
ARHGEF1-221ENST00000600387 SEC61BP60468 96 aaKnown RBP8.55□□□□□ -1.04
ARHGEF1-221ENST00000600387 KIAA1109Q2LD37 5005 aa8.49□□□□□ -1.05
ARHGEF1-221ENST00000600387 MUC17Q685J3 4493 aa8.46□□□□□ -1.06
ARHGEF1-221ENST00000600387 CAMK2N1Q7Z7J9 78 aa8.44□□□□□ -1.06
ARHGEF1-221ENST00000600387 LUZP6Q538Z0 58 aa8.43□□□□□ -1.06
ARHGEF1-221ENST00000600387 EPPK1P58107 5090 aaKnown RBP8.4□□□□□ -1.06
ARHGEF1-221ENST00000600387 KRTAP4-1Q9BYQ7 146 aa8.36□□□□□ -1.07
ARHGEF1-221ENST00000600387 ABCA13Q86UQ4 5058 aa8.35□□□□□ -1.07
ARHGEF1-221ENST00000600387 KRTAP19-2Q3LHN2 52 aa8.3□□□□□ -1.08
ARHGEF1-221ENST00000600387 BIRC6Q9NR09 4857 aa8.29□□□□□ -1.08
ARHGEF1-221ENST00000600387 A0A0A0MQY5 61 aa8.24□□□□□ -1.09
ARHGEF1-221ENST00000600387 KRTAP23-1A1A580 65 aa8.23□□□□□ -1.09
ARHGEF1-221ENST00000600387 TNP1P09430 55 aa8.19□□□□□ -1.1
ARHGEF1-221ENST00000600387 KRTAP4-5Q9BYR2 181 aa8.19□□□□□ -1.1
ARHGEF1-221ENST00000600387 SPRR5A0A1B0GTR4 108 aa8.09□□□□□ -1.11
ARHGEF1-221ENST00000600387 J3QL48 77 aa8.06□□□□□ -1.12
ARHGEF1-221ENST00000600387 FLGP20930 4061 aaPredicted RBP8.04□□□□□ -1.12
ARHGEF1-221ENST00000600387 HERC2O95714 4834 aa7.96□□□□□ -1.13
ARHGEF1-221ENST00000600387 HERC1Q15751 4861 aa7.93□□□□□ -1.14
ARHGEF1-221ENST00000600387 PCLOQ9Y6V0 5065 aa7.92□□□□□ -1.14
ARHGEF1-221ENST00000600387 SPRR2GQ9BYE4 73 aa7.8□□□□□ -1.16
ARHGEF1-221ENST00000600387 MUC2Q02817 5179 aa7.76□□□□□ -1.17
ARHGEF1-221ENST00000600387 KRTAP19-1Q8IUB9 90 aa7.69□□□□□ -1.18
ARHGEF1-221ENST00000600387 LCE3AQ5TA76 89 aa7.67□□□□□ -1.18
ARHGEF1-221ENST00000600387 LCE2CQ5TA81 110 aa7.64□□□□□ -1.19
ARHGEF1-221ENST00000600387 KRTAP8-1Q8IUC2 63 aa7.52□□□□□ -1.21
ARHGEF1-221ENST00000600387 M0R2T5 61 aa7.5□□□□□ -1.21
ARHGEF1-221ENST00000600387 PRO2289Q9P1D8 64 aa7.49□□□□□ -1.21
ARHGEF1-221ENST00000600387 INE1O15225 51 aa7.43□□□□□ -1.22
ARHGEF1-221ENST00000600387 KRTAP10-10P60014 251 aa7.41□□□□□ -1.22
ARHGEF1-221ENST00000600387 MT1HP80294 61 aa7.41□□□□□ -1.22
ARHGEF1-221ENST00000600387 MT1FP04733 61 aa7.4□□□□□ -1.23
ARHGEF1-221ENST00000600387 MT2AP02795 61 aa7.39□□□□□ -1.23
ARHGEF1-221ENST00000600387 KRTAP19-8Q3LI54 63 aa7.39□□□□□ -1.23
ARHGEF1-221ENST00000600387 FAT4Q6V0I7 4981 aa7.38□□□□□ -1.23
ARHGEF1-221ENST00000600387 HMCN2Q8NDA2 5059 aa7.36□□□□□ -1.23
ARHGEF1-221ENST00000600387 KRTAP12-3P60328 96 aa7.31□□□□□ -1.24
ARHGEF1-221ENST00000600387 KRTAP10-5P60370 271 aa7.31□□□□□ -1.24
ARHGEF1-221ENST00000600387 KRTAP9-8Q9BYQ0 159 aa7.3□□□□□ -1.24
ARHGEF1-221ENST00000600387 MT1XP80297 61 aa7.28□□□□□ -1.24
ARHGEF1-221ENST00000600387 KRTAP10-12P60413 245 aa7.27□□□□□ -1.24
ARHGEF1-221ENST00000600387 MT1BP07438 61 aa7.25□□□□□ -1.25
ARHGEF1-221ENST00000600387 UBR4Q5T4S7 5183 aa7.2□□□□□ -1.26
ARHGEF1-221ENST00000600387 KRTAP10-7P60409 375 aaPredicted RBP7.1□□□□□ -1.27
ARHGEF1-221ENST00000600387 RNF213Q63HN8 5207 aa7.08□□□□□ -1.28
ARHGEF1-221ENST00000600387 KRTAP9-3Q9BYQ3 159 aa6.98□□□□□ -1.29
ARHGEF1-221ENST00000600387 LCE3CQ5T5A8 94 aa6.92□□□□□ -1.3
ARHGEF1-221ENST00000600387 KRTAP19-5Q3LI72 72 aa6.87□□□□□ -1.31
ARHGEF1-221ENST00000600387 KRTAP9-6A8MVA2 160 aa6.64□□□□□ -1.35
ARHGEF1-221ENST00000600387 LCE2BO14633 110 aa6.62□□□□□ -1.35
ARHGEF1-221ENST00000600387 KRTAP2-3P0C7H8 128 aa6.59□□□□□ -1.35
ARHGEF1-221ENST00000600387 KRTAP2-4Q9BYR9 128 aa6.59□□□□□ -1.35
ARHGEF1-221ENST00000600387 KRTAP2-1Q9BYU5 128 aa6.59□□□□□ -1.35
ARHGEF1-221ENST00000600387 KRTAP4-8A0A0G2JLE6 195 aa6.55□□□□□ -1.36
ARHGEF1-221ENST00000600387 KRTAP4-8Q9BYQ9 185 aa6.55□□□□□ -1.36
ARHGEF1-221ENST00000600387 KRTAP19-4Q3LI73 84 aa6.53□□□□□ -1.36
ARHGEF1-221ENST00000600387 LCE2AQ5TA79 106 aaPredicted RBP6.51□□□□□ -1.37
ARHGEF1-221ENST00000600387 KRTAP19-7Q3SYF9 63 aa6.48□□□□□ -1.37
ARHGEF1-221ENST00000600387 KMT2DO14686 5537 aa6.46□□□□□ -1.38
ARHGEF1-221ENST00000600387 KRTAP4-7Q9BYR0 210 aa6.41□□□□□ -1.38
ARHGEF1-221ENST00000600387 MT1LQ93083 61 aa6.33□□□□□ -1.4
ARHGEF1-221ENST00000600387 USH2AO75445 5202 aa6.32□□□□□ -1.4
ARHGEF1-221ENST00000600387 KRTAP9-2Q9BYQ4 174 aa6.29□□□□□ -1.4
ARHGEF1-221ENST00000600387 MT1EP04732 61 aa6.28□□□□□ -1.4
ARHGEF1-221ENST00000600387 FSIP2Q5CZC0 6907 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms