RNA–Protein interactions for RNA: ENST00000600343.5

NFKB1-212, Transcript of nuclear factor kappa B subunit 1, humanhuman

TSL 2 BASIC

Gene NFKB1, Length 4,010 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-212ENST00000600343 M0QZ58 72 aa4.8□□□□□ -1.64
NFKB1-212ENST00000600343 DNAH11Q96DT5 4516 aa4.8□□□□□ -1.64
NFKB1-212ENST00000600343 KRTAP10-2P60368 255 aa4.79□□□□□ -1.64
NFKB1-212ENST00000600343 DNAH6Q9C0G6 4158 aa4.78□□□□□ -1.64
NFKB1-212ENST00000600343 PRKDCP78527 4128 aaKnown RBP4.76□□□□□ -1.65
NFKB1-212ENST00000600343 KRTAP10-1P60331 282 aa4.75□□□□□ -1.65
NFKB1-212ENST00000600343 PP632Q6XCG6 107 aa4.7□□□□□ -1.66
NFKB1-212ENST00000600343 LRP1BQ9NZR2 4599 aa4.7□□□□□ -1.66
NFKB1-212ENST00000600343 KRTAP21-3Q3LHN1 58 aa4.67□□□□□ -1.66
NFKB1-212ENST00000600343 VPS13BQ7Z7G8 4022 aa4.64□□□□□ -1.67
NFKB1-212ENST00000600343 R4GN34 69 aa4.64□□□□□ -1.67
NFKB1-212ENST00000600343 DNAH5Q8TE73 4624 aa4.63□□□□□ -1.67
NFKB1-212ENST00000600343 STARD9Q9P2P6 4700 aa4.61□□□□□ -1.67
NFKB1-212ENST00000600343 MYCBP2O75592 4640 aa4.59□□□□□ -1.67
NFKB1-212ENST00000600343 INE1O15225 51 aa4.58□□□□□ -1.68
NFKB1-212ENST00000600343 SPRR5A0A1B0GTR4 108 aa4.57□□□□□ -1.68
NFKB1-212ENST00000600343 APOBP04114 4563 aaKnown RBP4.56□□□□□ -1.68
NFKB1-212ENST00000600343 PKHD1P08F94 4074 aa4.51□□□□□ -1.69
NFKB1-212ENST00000600343 SACSQ9NZJ4 4579 aa4.5□□□□□ -1.69
NFKB1-212ENST00000600343 FAT2Q9NYQ8 4349 aa4.46□□□□□ -1.7
NFKB1-212ENST00000600343 PKHD1L1Q86WI1 4243 aa4.46□□□□□ -1.7
NFKB1-212ENST00000600343 LRP1Q07954 4544 aaKnown RBP4.43□□□□□ -1.7
NFKB1-212ENST00000600343 PKD1P98161 4303 aa4.41□□□□□ -1.7
NFKB1-212ENST00000600343 Q5VSD8 79 aa4.38□□□□□ -1.71
NFKB1-212ENST00000600343 LORP23490 312 aaPredicted RBP4.37□□□□□ -1.71
NFKB1-212ENST00000600343 HSPG2P98160 4391 aa4.37□□□□□ -1.71
NFKB1-212ENST00000600343 TNP1P09430 55 aa4.34□□□□□ -1.71
NFKB1-212ENST00000600343 KRTAP23-1A1A580 65 aa4.32□□□□□ -1.72
NFKB1-212ENST00000600343 FAT3Q8TDW7 4589 aa4.3□□□□□ -1.72
NFKB1-212ENST00000600343 TNXBP22105 4242 aa4.28□□□□□ -1.72
NFKB1-212ENST00000600343 KRTAP10-4P60372 401 aaPredicted RBP4.26□□□□□ -1.73
NFKB1-212ENST00000600343 DYNC1H1Q14204 4646 aaKnown RBP4.26□□□□□ -1.73
NFKB1-212ENST00000600343 FAT1Q14517 4588 aa4.23□□□□□ -1.73
NFKB1-212ENST00000600343 HYDINQ4G0P3 5121 aa4.18□□□□□ -1.74
NFKB1-212ENST00000600343 LPAP08519 4548 aa4.18□□□□□ -1.74
NFKB1-212ENST00000600343 M0R2T5 61 aa4.14□□□□□ -1.75
NFKB1-212ENST00000600343 A0A1B0GVY2 172 aa4.04□□□□□ -1.76
NFKB1-212ENST00000600343 LCE3AQ5TA76 89 aa4.02□□□□□ -1.77
NFKB1-212ENST00000600343 LRP2P98164 4655 aa4.02□□□□□ -1.77
NFKB1-212ENST00000600343 KMT2CQ8NEZ4 4911 aaKnown RBP3.95□□□□□ -1.78
NFKB1-212ENST00000600343 KRTAP10-10P60014 251 aa3.95□□□□□ -1.78
NFKB1-212ENST00000600343 DNHD1Q96M86 4753 aa3.9□□□□□ -1.78
NFKB1-212ENST00000600343 KRTAP8-1Q8IUC2 63 aa3.87□□□□□ -1.79
NFKB1-212ENST00000600343 KRTAP10-12P60413 245 aa3.85□□□□□ -1.79
NFKB1-212ENST00000600343 MT1HL1P0DM35 61 aa3.85□□□□□ -1.79
NFKB1-212ENST00000600343 FLGP20930 4061 aaPredicted RBP3.84□□□□□ -1.8
NFKB1-212ENST00000600343 MUC17Q685J3 4493 aa3.81□□□□□ -1.8
NFKB1-212ENST00000600343 KRTAP12-3P60328 96 aa3.79□□□□□ -1.8
NFKB1-212ENST00000600343 KRTAP4-1Q9BYQ7 146 aa3.79□□□□□ -1.8
NFKB1-212ENST00000600343 KRTAP19-2Q3LHN2 52 aa3.75□□□□□ -1.81
NFKB1-212ENST00000600343 KRTAP4-5Q9BYR2 181 aa3.73□□□□□ -1.81
NFKB1-212ENST00000600343 KRTAP10-5P60370 271 aa3.67□□□□□ -1.82
NFKB1-212ENST00000600343 RYR1P21817 5038 aa3.67□□□□□ -1.82
NFKB1-212ENST00000600343 SPRR2GQ9BYE4 73 aa3.67□□□□□ -1.82
NFKB1-212ENST00000600343 HERC1Q15751 4861 aa3.66□□□□□ -1.82
NFKB1-212ENST00000600343 KRTAP17-1Q9BYP8 105 aa3.64□□□□□ -1.83
NFKB1-212ENST00000600343 KRTAP19-1Q8IUB9 90 aa3.62□□□□□ -1.83
NFKB1-212ENST00000600343 LCE3CQ5T5A8 94 aa3.59□□□□□ -1.83
NFKB1-212ENST00000600343 KRTAP2-3P0C7H8 128 aa3.59□□□□□ -1.83
NFKB1-212ENST00000600343 KRTAP2-4Q9BYR9 128 aa3.59□□□□□ -1.83
NFKB1-212ENST00000600343 KRTAP2-1Q9BYU5 128 aa3.59□□□□□ -1.83
NFKB1-212ENST00000600343 ABCA13Q86UQ4 5058 aa3.56□□□□□ -1.84
NFKB1-212ENST00000600343 KIAA1109Q2LD37 5005 aa3.55□□□□□ -1.84
NFKB1-212ENST00000600343 RYR2Q92736 4967 aa3.52□□□□□ -1.85
NFKB1-212ENST00000600343 KRTAP9-6A8MVA2 160 aa3.51□□□□□ -1.85
NFKB1-212ENST00000600343 KRTAP10-7P60409 375 aaPredicted RBP3.48□□□□□ -1.85
NFKB1-212ENST00000600343 MT1XP80297 61 aa3.47□□□□□ -1.85
NFKB1-212ENST00000600343 PCLOQ9Y6V0 5065 aa3.47□□□□□ -1.85
NFKB1-212ENST00000600343 RYR3Q15413 4870 aa3.45□□□□□ -1.86
NFKB1-212ENST00000600343 MUC2Q02817 5179 aa3.44□□□□□ -1.86
NFKB1-212ENST00000600343 KRTAP19-5Q3LI72 72 aa3.43□□□□□ -1.86
NFKB1-212ENST00000600343 KRTAP12-4P60329 112 aa3.38□□□□□ -1.87
NFKB1-212ENST00000600343 KRTAP19-8Q3LI54 63 aa3.38□□□□□ -1.87
NFKB1-212ENST00000600343 MT1BP07438 61 aa3.35□□□□□ -1.87
NFKB1-212ENST00000600343 UBR4Q5T4S7 5183 aa3.34□□□□□ -1.88
NFKB1-212ENST00000600343 MT1FP04733 61 aa3.34□□□□□ -1.88
NFKB1-212ENST00000600343 HERC2O95714 4834 aa3.32□□□□□ -1.88
NFKB1-212ENST00000600343 HMCN2Q8NDA2 5059 aa3.31□□□□□ -1.88
NFKB1-212ENST00000600343 BIRC6Q9NR09 4857 aa3.3□□□□□ -1.88
NFKB1-212ENST00000600343 MT2AP02795 61 aa3.3□□□□□ -1.88
NFKB1-212ENST00000600343 LCE2CQ5TA81 110 aa3.28□□□□□ -1.88
NFKB1-212ENST00000600343 KRTAP4-7Q9BYR0 210 aa3.28□□□□□ -1.88
NFKB1-212ENST00000600343 EPPK1P58107 5090 aaKnown RBP3.26□□□□□ -1.89
NFKB1-212ENST00000600343 FAT4Q6V0I7 4981 aa3.24□□□□□ -1.89
NFKB1-212ENST00000600343 MT1HP80294 61 aa3.24□□□□□ -1.89
NFKB1-212ENST00000600343 LCE2AQ5TA79 106 aaPredicted RBP3.21□□□□□ -1.9
NFKB1-212ENST00000600343 CRCT1Q9UGL9 99 aa3.21□□□□□ -1.9
NFKB1-212ENST00000600343 KRTAP9-6A0A140TA67 174 aa3.2□□□□□ -1.9
NFKB1-212ENST00000600343 KRTAP2-2Q9BYT5 123 aa3.19□□□□□ -1.9
NFKB1-212ENST00000600343 KRTAP9-8Q9BYQ0 159 aa3.18□□□□□ -1.9
NFKB1-212ENST00000600343 KRTAP6-3Q3LI67 103 aa3.16□□□□□ -1.9
NFKB1-212ENST00000600343 LCE1AQ5T7P2 110 aa3.14□□□□□ -1.91
NFKB1-212ENST00000600343 KRTAP4-8A0A0G2JLE6 195 aa3.12□□□□□ -1.91
NFKB1-212ENST00000600343 KRTAP4-8Q9BYQ9 185 aa3.12□□□□□ -1.91
NFKB1-212ENST00000600343 KMT2DO14686 5537 aa3.12□□□□□ -1.91
NFKB1-212ENST00000600343 KRTAP19-4Q3LI73 84 aa3.11□□□□□ -1.91
NFKB1-212ENST00000600343 KRTAP19-7Q3SYF9 63 aa3.08□□□□□ -1.92
NFKB1-212ENST00000600343 RNF213Q63HN8 5207 aa3.08□□□□□ -1.92
NFKB1-212ENST00000600343 PRM1P04553 51 aa3.08□□□□□ -1.92
NFKB1-212ENST00000600343 MT1LQ93083 61 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms