RNA–Protein interactions for RNA: ENST00000599589.5

ARHGEF1-218, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-218ENST00000599589 PKHD1L1Q86WI1 4243 aa10.09□□□□□ -0.79
ARHGEF1-218ENST00000599589 RPL37P61927 97 aaKnown RBP10.06□□□□□ -0.8
ARHGEF1-218ENST00000599589 A0A0D9SG42 100 aa10.03□□□□□ -0.8
ARHGEF1-218ENST00000599589 KRTAP10-6P60371 365 aaPredicted RBP10.03□□□□□ -0.8
ARHGEF1-218ENST00000599589 KRTAP13-4Q3LI77 160 aa10.03□□□□□ -0.8
ARHGEF1-218ENST00000599589 TPRXLQ17RH7 258 aa10□□□□□ -0.81
ARHGEF1-218ENST00000599589 Q5VSD8 79 aa9.98□□□□□ -0.81
ARHGEF1-218ENST00000599589 KRTAP3-3Q9BYR6 98 aa9.97□□□□□ -0.81
ARHGEF1-218ENST00000599589 SPINT4Q6UDR6 99 aa9.96□□□□□ -0.82
ARHGEF1-218ENST00000599589 KRTAP10-8P60410 259 aa9.93□□□□□ -0.82
ARHGEF1-218ENST00000599589 KRTAP3-2Q9BYR7 98 aa9.92□□□□□ -0.82
ARHGEF1-218ENST00000599589 C10orf95Q9H7T3 257 aa9.91□□□□□ -0.82
ARHGEF1-218ENST00000599589 HSPG2P98160 4391 aa9.91□□□□□ -0.82
ARHGEF1-218ENST00000599589 RYR3Q15413 4870 aa9.91□□□□□ -0.82
ARHGEF1-218ENST00000599589 DMBT1Q9UGM3 2413 aaPredicted RBP9.88□□□□□ -0.83
ARHGEF1-218ENST00000599589 TNXBP22105 4242 aa9.82□□□□□ -0.84
ARHGEF1-218ENST00000599589 RYR1P21817 5038 aa9.82□□□□□ -0.84
ARHGEF1-218ENST00000599589 LRP1Q07954 4544 aaKnown RBP9.81□□□□□ -0.84
ARHGEF1-218ENST00000599589 S4R3F8 94 aa9.8□□□□□ -0.84
ARHGEF1-218ENST00000599589 KRTAP17-1Q9BYP8 105 aa9.79□□□□□ -0.84
ARHGEF1-218ENST00000599589 FAT3Q8TDW7 4589 aa9.76□□□□□ -0.85
ARHGEF1-218ENST00000599589 KRTAP12-2P59991 146 aa9.74□□□□□ -0.85
ARHGEF1-218ENST00000599589 KRTAP15-1Q3LI76 137 aa9.74□□□□□ -0.85
ARHGEF1-218ENST00000599589 NDUFAF8A1L188 74 aa9.7□□□□□ -0.86
ARHGEF1-218ENST00000599589 KIAA1109Q2LD37 5005 aa9.67□□□□□ -0.86
ARHGEF1-218ENST00000599589 MT1HL1P0DM35 61 aa9.66□□□□□ -0.86
ARHGEF1-218ENST00000599589 KRTAP12-1P59990 96 aa9.62□□□□□ -0.87
ARHGEF1-218ENST00000599589 XP32Q5T750 250 aa9.59□□□□□ -0.87
ARHGEF1-218ENST00000599589 EPPK1P58107 5090 aaKnown RBP9.54□□□□□ -0.88
ARHGEF1-218ENST00000599589 MYCBP2O75592 4640 aa9.54□□□□□ -0.88
ARHGEF1-218ENST00000599589 KRTAP4-5Q9BYR2 181 aa9.4□□□□□ -0.9
ARHGEF1-218ENST00000599589 M0QZ58 72 aa9.39□□□□□ -0.91
ARHGEF1-218ENST00000599589 LPAP08519 4548 aa9.33□□□□□ -0.92
ARHGEF1-218ENST00000599589 LRP2P98164 4655 aa9.19□□□□□ -0.94
ARHGEF1-218ENST00000599589 ABCA13Q86UQ4 5058 aa9.17□□□□□ -0.94
ARHGEF1-218ENST00000599589 J3QL48 77 aa9.16□□□□□ -0.94
ARHGEF1-218ENST00000599589 R4GN34 69 aa9.13□□□□□ -0.95
ARHGEF1-218ENST00000599589 PLAC4Q8WY50 150 aa9.11□□□□□ -0.95
ARHGEF1-218ENST00000599589 SEC61BP60468 96 aaKnown RBP9.07□□□□□ -0.96
ARHGEF1-218ENST00000599589 HERC2O95714 4834 aa9.04□□□□□ -0.96
ARHGEF1-218ENST00000599589 LORP23490 312 aaPredicted RBP8.99□□□□□ -0.97
ARHGEF1-218ENST00000599589 BIRC6Q9NR09 4857 aa8.98□□□□□ -0.97
ARHGEF1-218ENST00000599589 KRTAP4-1Q9BYQ7 146 aa8.86□□□□□ -0.99
ARHGEF1-218ENST00000599589 MUC17Q685J3 4493 aa8.83□□□□□ -1
ARHGEF1-218ENST00000599589 LUZP6Q538Z0 58 aa8.83□□□□□ -1
ARHGEF1-218ENST00000599589 A0A0A0MQY5 61 aa8.77□□□□□ -1.01
ARHGEF1-218ENST00000599589 PP632Q6XCG6 107 aa8.76□□□□□ -1.01
ARHGEF1-218ENST00000599589 CAMK2N1Q7Z7J9 78 aa8.73□□□□□ -1.01
ARHGEF1-218ENST00000599589 KRTAP19-2Q3LHN2 52 aa8.68□□□□□ -1.02
ARHGEF1-218ENST00000599589 PCLOQ9Y6V0 5065 aa8.59□□□□□ -1.03
ARHGEF1-218ENST00000599589 HERC1Q15751 4861 aa8.55□□□□□ -1.04
ARHGEF1-218ENST00000599589 HMCN2Q8NDA2 5059 aa8.52□□□□□ -1.04
ARHGEF1-218ENST00000599589 MUC2Q02817 5179 aa8.48□□□□□ -1.05
ARHGEF1-218ENST00000599589 TNP1P09430 55 aa8.43□□□□□ -1.06
ARHGEF1-218ENST00000599589 FLGP20930 4061 aaPredicted RBP8.41□□□□□ -1.06
ARHGEF1-218ENST00000599589 SPRR5A0A1B0GTR4 108 aa8.36□□□□□ -1.07
ARHGEF1-218ENST00000599589 KRTAP23-1A1A580 65 aa8.33□□□□□ -1.08
ARHGEF1-218ENST00000599589 LCE2CQ5TA81 110 aa8.3□□□□□ -1.08
ARHGEF1-218ENST00000599589 FAT4Q6V0I7 4981 aa8.11□□□□□ -1.11
ARHGEF1-218ENST00000599589 M0R2T5 61 aa8.11□□□□□ -1.11
ARHGEF1-218ENST00000599589 RNF213Q63HN8 5207 aa8.1□□□□□ -1.11
ARHGEF1-218ENST00000599589 MT1HP80294 61 aa8.1□□□□□ -1.11
ARHGEF1-218ENST00000599589 UBR4Q5T4S7 5183 aa8.09□□□□□ -1.11
ARHGEF1-218ENST00000599589 LCE3AQ5TA76 89 aa7.98□□□□□ -1.13
ARHGEF1-218ENST00000599589 SPRR2GQ9BYE4 73 aa7.96□□□□□ -1.14
ARHGEF1-218ENST00000599589 KRTAP19-1Q8IUB9 90 aa7.91□□□□□ -1.14
ARHGEF1-218ENST00000599589 MT2AP02795 61 aa7.89□□□□□ -1.15
ARHGEF1-218ENST00000599589 KRTAP10-10P60014 251 aa7.87□□□□□ -1.15
ARHGEF1-218ENST00000599589 KRTAP9-8Q9BYQ0 159 aa7.87□□□□□ -1.15
ARHGEF1-218ENST00000599589 MT1FP04733 61 aa7.86□□□□□ -1.15
ARHGEF1-218ENST00000599589 PRO2289Q9P1D8 64 aa7.84□□□□□ -1.15
ARHGEF1-218ENST00000599589 KRTAP8-1Q8IUC2 63 aa7.71□□□□□ -1.18
ARHGEF1-218ENST00000599589 INE1O15225 51 aa7.69□□□□□ -1.18
ARHGEF1-218ENST00000599589 KRTAP19-8Q3LI54 63 aa7.67□□□□□ -1.18
ARHGEF1-218ENST00000599589 KRTAP9-3Q9BYQ3 159 aa7.56□□□□□ -1.2
ARHGEF1-218ENST00000599589 MT1BP07438 61 aa7.55□□□□□ -1.2
ARHGEF1-218ENST00000599589 KRTAP12-3P60328 96 aa7.54□□□□□ -1.2
ARHGEF1-218ENST00000599589 KRTAP10-5P60370 271 aa7.51□□□□□ -1.21
ARHGEF1-218ENST00000599589 MT1XP80297 61 aa7.49□□□□□ -1.21
ARHGEF1-218ENST00000599589 KRTAP10-12P60413 245 aa7.48□□□□□ -1.21
ARHGEF1-218ENST00000599589 LCE2AQ5TA79 106 aaPredicted RBP7.42□□□□□ -1.22
ARHGEF1-218ENST00000599589 KRTAP10-7P60409 375 aaPredicted RBP7.36□□□□□ -1.23
ARHGEF1-218ENST00000599589 LCE2BO14633 110 aa7.29□□□□□ -1.24
ARHGEF1-218ENST00000599589 LCE3CQ5T5A8 94 aa7.13□□□□□ -1.27
ARHGEF1-218ENST00000599589 KRTAP19-5Q3LI72 72 aa7.11□□□□□ -1.27
ARHGEF1-218ENST00000599589 USH2AO75445 5202 aa6.99□□□□□ -1.29
ARHGEF1-218ENST00000599589 KRTAP9-6A8MVA2 160 aa6.96□□□□□ -1.3
ARHGEF1-218ENST00000599589 KMT2DO14686 5537 aa6.92□□□□□ -1.3
ARHGEF1-218ENST00000599589 KRTAP4-8A0A0G2JLE6 195 aa6.83□□□□□ -1.32
ARHGEF1-218ENST00000599589 KRTAP4-8Q9BYQ9 185 aa6.83□□□□□ -1.32
ARHGEF1-218ENST00000599589 KRTAP2-3P0C7H8 128 aa6.81□□□□□ -1.32
ARHGEF1-218ENST00000599589 KRTAP2-4Q9BYR9 128 aa6.81□□□□□ -1.32
ARHGEF1-218ENST00000599589 KRTAP2-1Q9BYU5 128 aa6.81□□□□□ -1.32
ARHGEF1-218ENST00000599589 KRTAP4-7Q9BYR0 210 aa6.76□□□□□ -1.33
ARHGEF1-218ENST00000599589 SSPOA2VEC9 5147 aa6.7□□□□□ -1.34
ARHGEF1-218ENST00000599589 KRTAP19-6Q3LI70 58 aa6.69□□□□□ -1.34
ARHGEF1-218ENST00000599589 KRTAP19-7Q3SYF9 63 aa6.66□□□□□ -1.34
ARHGEF1-218ENST00000599589 LCE2DQ5TA82 110 aaPredicted RBP6.54□□□□□ -1.36
ARHGEF1-218ENST00000599589 FSIP2Q5CZC0 6907 aa6.51□□□□□ -1.37
ARHGEF1-218ENST00000599589 MT1LQ93083 61 aa6.5□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms