RNA–Protein interactions for RNA: ENST00000599564.5

GRAMD1A-211, Transcript of GRAM domain containing 1A, humanhuman

TSL 5 BASIC

Gene GRAMD1A, Length 2,825 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-211ENST00000599564 FAT1Q14517 4588 aa8.65□□□□□ -1.02
GRAMD1A-211ENST00000599564 SACSQ9NZJ4 4579 aa8.64□□□□□ -1.03
GRAMD1A-211ENST00000599564 KRTAP3-2Q9BYR7 98 aa8.63□□□□□ -1.03
GRAMD1A-211ENST00000599564 KRTAP21-3Q3LHN1 58 aa8.6□□□□□ -1.03
GRAMD1A-211ENST00000599564 KRTAP15-1Q3LI76 137 aa8.56□□□□□ -1.04
GRAMD1A-211ENST00000599564 KRTAP12-2P59991 146 aa8.55□□□□□ -1.04
GRAMD1A-211ENST00000599564 PKHD1L1Q86WI1 4243 aa8.54□□□□□ -1.04
GRAMD1A-211ENST00000599564 S4R3F8 94 aa8.54□□□□□ -1.04
GRAMD1A-211ENST00000599564 KRTAP10-8P60410 259 aa8.53□□□□□ -1.04
GRAMD1A-211ENST00000599564 DYNC1H1Q14204 4646 aaKnown RBP8.53□□□□□ -1.04
GRAMD1A-211ENST00000599564 APOBP04114 4563 aaKnown RBP8.46□□□□□ -1.06
GRAMD1A-211ENST00000599564 HSPG2P98160 4391 aa8.45□□□□□ -1.06
GRAMD1A-211ENST00000599564 KMT2CQ8NEZ4 4911 aaKnown RBP8.44□□□□□ -1.06
GRAMD1A-211ENST00000599564 KRTAP10-4P60372 401 aaPredicted RBP8.43□□□□□ -1.06
GRAMD1A-211ENST00000599564 MYCBP2O75592 4640 aa8.41□□□□□ -1.06
GRAMD1A-211ENST00000599564 KRTAP12-1P59990 96 aa8.39□□□□□ -1.07
GRAMD1A-211ENST00000599564 LRP1Q07954 4544 aaKnown RBP8.37□□□□□ -1.07
GRAMD1A-211ENST00000599564 FAT3Q8TDW7 4589 aa8.36□□□□□ -1.07
GRAMD1A-211ENST00000599564 XP32Q5T750 250 aa8.29□□□□□ -1.08
GRAMD1A-211ENST00000599564 LPAP08519 4548 aa8.24□□□□□ -1.09
GRAMD1A-211ENST00000599564 RYR2Q92736 4967 aa8.21□□□□□ -1.1
GRAMD1A-211ENST00000599564 RYR3Q15413 4870 aa8.2□□□□□ -1.1
GRAMD1A-211ENST00000599564 TNXBP22105 4242 aa8.19□□□□□ -1.1
GRAMD1A-211ENST00000599564 A0A1B0GVY2 172 aa8.17□□□□□ -1.1
GRAMD1A-211ENST00000599564 M0QZ58 72 aa8.11□□□□□ -1.11
GRAMD1A-211ENST00000599564 LRP2P98164 4655 aa8.01□□□□□ -1.13
GRAMD1A-211ENST00000599564 PLAC4Q8WY50 150 aa8.01□□□□□ -1.13
GRAMD1A-211ENST00000599564 R4GN34 69 aa7.97□□□□□ -1.13
GRAMD1A-211ENST00000599564 Q5VSD8 79 aa7.96□□□□□ -1.13
GRAMD1A-211ENST00000599564 A0A0A0MQY5 61 aa7.93□□□□□ -1.14
GRAMD1A-211ENST00000599564 EPPK1P58107 5090 aaKnown RBP7.92□□□□□ -1.14
GRAMD1A-211ENST00000599564 LORP23490 312 aaPredicted RBP7.88□□□□□ -1.15
GRAMD1A-211ENST00000599564 LUZP6Q538Z0 58 aa7.88□□□□□ -1.15
GRAMD1A-211ENST00000599564 KIAA1109Q2LD37 5005 aa7.87□□□□□ -1.15
GRAMD1A-211ENST00000599564 KRTAP17-1Q9BYP8 105 aa7.84□□□□□ -1.15
GRAMD1A-211ENST00000599564 MT1HL1P0DM35 61 aa7.78□□□□□ -1.16
GRAMD1A-211ENST00000599564 RYR1P21817 5038 aa7.72□□□□□ -1.17
GRAMD1A-211ENST00000599564 CAMK2N1Q7Z7J9 78 aa7.65□□□□□ -1.18
GRAMD1A-211ENST00000599564 ABCA13Q86UQ4 5058 aa7.62□□□□□ -1.19
GRAMD1A-211ENST00000599564 PP632Q6XCG6 107 aa7.56□□□□□ -1.2
GRAMD1A-211ENST00000599564 MUC17Q685J3 4493 aa7.5□□□□□ -1.21
GRAMD1A-211ENST00000599564 KRTAP4-1Q9BYQ7 146 aa7.48□□□□□ -1.21
GRAMD1A-211ENST00000599564 KRTAP4-5Q9BYR2 181 aa7.48□□□□□ -1.21
GRAMD1A-211ENST00000599564 SEC61BP60468 96 aaKnown RBP7.38□□□□□ -1.23
GRAMD1A-211ENST00000599564 HERC2O95714 4834 aa7.38□□□□□ -1.23
GRAMD1A-211ENST00000599564 MUC2Q02817 5179 aa7.34□□□□□ -1.23
GRAMD1A-211ENST00000599564 TNP1P09430 55 aa7.33□□□□□ -1.24
GRAMD1A-211ENST00000599564 BIRC6Q9NR09 4857 aa7.31□□□□□ -1.24
GRAMD1A-211ENST00000599564 KRTAP19-2Q3LHN2 52 aa7.28□□□□□ -1.24
GRAMD1A-211ENST00000599564 SPRR5A0A1B0GTR4 108 aa7.25□□□□□ -1.25
GRAMD1A-211ENST00000599564 PCLOQ9Y6V0 5065 aa7.24□□□□□ -1.25
GRAMD1A-211ENST00000599564 HERC1Q15751 4861 aa7.21□□□□□ -1.26
GRAMD1A-211ENST00000599564 KRTAP23-1A1A580 65 aa7.09□□□□□ -1.27
GRAMD1A-211ENST00000599564 J3QL48 77 aa7.09□□□□□ -1.28
GRAMD1A-211ENST00000599564 FLGP20930 4061 aaPredicted RBP7.04□□□□□ -1.28
GRAMD1A-211ENST00000599564 LCE3AQ5TA76 89 aa6.98□□□□□ -1.29
GRAMD1A-211ENST00000599564 FAT4Q6V0I7 4981 aa6.93□□□□□ -1.3
GRAMD1A-211ENST00000599564 PRO2289Q9P1D8 64 aa6.89□□□□□ -1.31
GRAMD1A-211ENST00000599564 HMCN2Q8NDA2 5059 aa6.86□□□□□ -1.31
GRAMD1A-211ENST00000599564 KRTAP19-1Q8IUB9 90 aa6.83□□□□□ -1.32
GRAMD1A-211ENST00000599564 RNF213Q63HN8 5207 aa6.81□□□□□ -1.32
GRAMD1A-211ENST00000599564 UBR4Q5T4S7 5183 aa6.79□□□□□ -1.32
GRAMD1A-211ENST00000599564 SPRR2GQ9BYE4 73 aa6.79□□□□□ -1.32
GRAMD1A-211ENST00000599564 INE1O15225 51 aa6.7□□□□□ -1.34
GRAMD1A-211ENST00000599564 M0R2T5 61 aa6.69□□□□□ -1.34
GRAMD1A-211ENST00000599564 LCE2CQ5TA81 110 aa6.68□□□□□ -1.34
GRAMD1A-211ENST00000599564 KRTAP8-1Q8IUC2 63 aa6.65□□□□□ -1.34
GRAMD1A-211ENST00000599564 KRTAP10-10P60014 251 aa6.59□□□□□ -1.35
GRAMD1A-211ENST00000599564 MT1FP04733 61 aa6.57□□□□□ -1.36
GRAMD1A-211ENST00000599564 KRTAP12-3P60328 96 aa6.57□□□□□ -1.36
GRAMD1A-211ENST00000599564 MT2AP02795 61 aa6.5□□□□□ -1.37
GRAMD1A-211ENST00000599564 KRTAP10-5P60370 271 aa6.5□□□□□ -1.37
GRAMD1A-211ENST00000599564 KRTAP10-12P60413 245 aa6.49□□□□□ -1.37
GRAMD1A-211ENST00000599564 MT1HP80294 61 aa6.48□□□□□ -1.37
GRAMD1A-211ENST00000599564 MT1XP80297 61 aa6.47□□□□□ -1.37
GRAMD1A-211ENST00000599564 KRTAP10-7P60409 375 aaPredicted RBP6.42□□□□□ -1.38
GRAMD1A-211ENST00000599564 MT1BP07438 61 aa6.4□□□□□ -1.38
GRAMD1A-211ENST00000599564 KRTAP9-8Q9BYQ0 159 aa6.4□□□□□ -1.39
GRAMD1A-211ENST00000599564 KRTAP19-8Q3LI54 63 aa6.38□□□□□ -1.39
GRAMD1A-211ENST00000599564 KMT2DO14686 5537 aa6.21□□□□□ -1.42
GRAMD1A-211ENST00000599564 KRTAP19-5Q3LI72 72 aa6.19□□□□□ -1.42
GRAMD1A-211ENST00000599564 LCE3CQ5T5A8 94 aa6.18□□□□□ -1.42
GRAMD1A-211ENST00000599564 KRTAP9-6A8MVA2 160 aa6.11□□□□□ -1.43
GRAMD1A-211ENST00000599564 KRTAP9-3Q9BYQ3 159 aa6.07□□□□□ -1.44
GRAMD1A-211ENST00000599564 USH2AO75445 5202 aa6.06□□□□□ -1.44
GRAMD1A-211ENST00000599564 KRTAP4-8A0A0G2JLE6 195 aa6□□□□□ -1.45
GRAMD1A-211ENST00000599564 KRTAP4-8Q9BYQ9 185 aa6□□□□□ -1.45
GRAMD1A-211ENST00000599564 KRTAP4-7Q9BYR0 210 aa5.98□□□□□ -1.45
GRAMD1A-211ENST00000599564 KRTAP2-3P0C7H8 128 aa5.89□□□□□ -1.47
GRAMD1A-211ENST00000599564 KRTAP2-4Q9BYR9 128 aa5.89□□□□□ -1.47
GRAMD1A-211ENST00000599564 KRTAP2-1Q9BYU5 128 aa5.89□□□□□ -1.47
GRAMD1A-211ENST00000599564 LCE2BO14633 110 aa5.84□□□□□ -1.47
GRAMD1A-211ENST00000599564 FSIP2Q5CZC0 6907 aa5.82□□□□□ -1.48
GRAMD1A-211ENST00000599564 LCE2AQ5TA79 106 aaPredicted RBP5.77□□□□□ -1.49
GRAMD1A-211ENST00000599564 KRTAP19-7Q3SYF9 63 aa5.76□□□□□ -1.49
GRAMD1A-211ENST00000599564 MT1LQ93083 61 aa5.61□□□□□ -1.51
GRAMD1A-211ENST00000599564 LOC100996750A0A140TA64 210 aa5.55□□□□□ -1.52
GRAMD1A-211ENST00000599564 MT1EP04732 61 aa5.53□□□□□ -1.52
GRAMD1A-211ENST00000599564 SSPOA2VEC9 5147 aa5.48□□□□□ -1.53
GRAMD1A-211ENST00000599564 KRTAP4-3Q9BYR4 195 aa5.48□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 166.7 ms