RNA–Protein interactions for RNA: ENST00000599165.5

LIG1-217, Transcript of DNA ligase 1, humanhuman

TSL 4

Gene LIG1, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-217ENST00000599165 H0Y9P7 68 aa5.41□□□□□ -1.54
LIG1-217ENST00000599165 KLKP1Q107X0 134 aa5.41□□□□□ -1.54
LIG1-217ENST00000599165 LINC00643Q86TS7 51 aa5.41□□□□□ -1.54
LIG1-217ENST00000599165 Q5VV11 94 aa5.38□□□□□ -1.55
LIG1-217ENST00000599165 KRTAP6-3Q3LI67 103 aa5.37□□□□□ -1.55
LIG1-217ENST00000599165 ATOX1O00244 68 aa5.36□□□□□ -1.55
LIG1-217ENST00000599165 OCR1Q9BZK8 76 aa5.36□□□□□ -1.55
LIG1-217ENST00000599165 A6NN06 94 aa5.33□□□□□ -1.56
LIG1-217ENST00000599165 KRTAP10-5P60370 271 aa5.33□□□□□ -1.56
LIG1-217ENST00000599165 LINC00208Q96KT6 92 aa5.32□□□□□ -1.56
LIG1-217ENST00000599165 H0YAA0 97 aa5.3□□□□□ -1.56
LIG1-217ENST00000599165 CRIPTQ9P021 101 aa5.3□□□□□ -1.56
LIG1-217ENST00000599165 IMUPQ9GZP8 106 aa5.29□□□□□ -1.56
LIG1-217ENST00000599165 NEBP20929 6669 aa5.29□□□□□ -1.56
LIG1-217ENST00000599165 A8MUN3 132 aa5.28□□□□□ -1.56
LIG1-217ENST00000599165 NDUFC1O43677 76 aa5.28□□□□□ -1.56
LIG1-217ENST00000599165 MUC12Q9UKN1 5478 aa5.25□□□□□ -1.57
LIG1-217ENST00000599165 MP68P56378 58 aa5.24□□□□□ -1.57
LIG1-217ENST00000599165 ADM2Q7Z4H4 148 aa5.23□□□□□ -1.57
LIG1-217ENST00000599165 H3BPC8 53 aa5.19□□□□□ -1.58
LIG1-217ENST00000599165 DMAC1Q96GE9 116 aa5.19□□□□□ -1.58
LIG1-217ENST00000599165 J3QR89 54 aa5.18□□□□□ -1.58
LIG1-217ENST00000599165 P0C880 135 aa5.16□□□□□ -1.58
LIG1-217ENST00000599165 KRTAP3-2Q9BYR7 98 aa5.16□□□□□ -1.58
LIG1-217ENST00000599165 KRTAP5-9P26371 169 aa5.15□□□□□ -1.59
LIG1-217ENST00000599165 MT1XP80297 61 aa5.14□□□□□ -1.59
LIG1-217ENST00000599165 KMT2DO14686 5537 aa5.13□□□□□ -1.59
LIG1-217ENST00000599165 MT-ATP8P03928 68 aa5.12□□□□□ -1.59
LIG1-217ENST00000599165 SCGB1A1P11684 91 aa5.12□□□□□ -1.59
LIG1-217ENST00000599165 R4GN34 69 aa5.06□□□□□ -1.6
LIG1-217ENST00000599165 MDN1Q9NU22 5596 aa5.05□□□□□ -1.6
LIG1-217ENST00000599165 TRAV7A0A075B6U4 112 aa5.04□□□□□ -1.6
LIG1-217ENST00000599165 M0QZ58 72 aa5.04□□□□□ -1.6
LIG1-217ENST00000599165 C20orf197Q8N268 126 aa5.02□□□□□ -1.61
LIG1-217ENST00000599165 K7ERU9 68 aa5.01□□□□□ -1.61
LIG1-217ENST00000599165 PLAC4Q8WY50 150 aa5.01□□□□□ -1.61
LIG1-217ENST00000599165 PRO2289Q9P1D8 64 aa5.01□□□□□ -1.61
LIG1-217ENST00000599165 ACYP2P14621 99 aa4.98□□□□□ -1.61
LIG1-217ENST00000599165 KRTAP12-2P59991 146 aa4.98□□□□□ -1.61
LIG1-217ENST00000599165 SMIM20Q8N5G0 67 aa4.98□□□□□ -1.61
LIG1-217ENST00000599165 SNURFQ9Y675 71 aa4.96□□□□□ -1.62
LIG1-217ENST00000599165 LINC01554Q52M75 96 aa4.95□□□□□ -1.62
LIG1-217ENST00000599165 KRTAP20-1Q3LI63 56 aa4.94□□□□□ -1.62
LIG1-217ENST00000599165 SPRR2FQ96RM1 72 aa4.94□□□□□ -1.62
LIG1-217ENST00000599165 KRTAP4-8A0A0G2JLE6 195 aa4.93□□□□□ -1.62
LIG1-217ENST00000599165 KRTAP4-8Q9BYQ9 185 aa4.93□□□□□ -1.62
LIG1-217ENST00000599165 KRTAP8-1Q8IUC2 63 aa4.91□□□□□ -1.62
LIG1-217ENST00000599165 KRTAP10-7P60409 375 aaPredicted RBP4.9□□□□□ -1.63
LIG1-217ENST00000599165 SPANXA2-OT1Q8N9U9 137 aa4.88□□□□□ -1.63
LIG1-217ENST00000599165 SPRR2EP22531 72 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 SPRR2BP35325 72 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 SPRR2AP35326 72 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 KRTAP10-12P60413 245 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 LCE1AQ5T7P2 110 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 SPTSSBQ8NFR3 76 aa4.87□□□□□ -1.63
LIG1-217ENST00000599165 CHKB-CPT1BH3BT56 60 aa4.86□□□□□ -1.63
LIG1-217ENST00000599165 KRTAP13-4Q3LI77 160 aa4.86□□□□□ -1.63
LIG1-217ENST00000599165 SERP2Q8N6R1 65 aa4.86□□□□□ -1.63
LIG1-217ENST00000599165 KRTAP2-3P0C7H8 128 aa4.82□□□□□ -1.64
LIG1-217ENST00000599165 KRTAP2-4Q9BYR9 128 aa4.82□□□□□ -1.64
LIG1-217ENST00000599165 PCP4P48539 62 aa4.77□□□□□ -1.65
LIG1-217ENST00000599165 COA5Q86WW8 74 aa4.75□□□□□ -1.65
LIG1-217ENST00000599165 CYSTM1Q9H1C7 97 aa4.75□□□□□ -1.65
LIG1-217ENST00000599165 COX7CP15954 63 aa4.71□□□□□ -1.66
LIG1-217ENST00000599165 SPRR2DP22532 72 aa4.7□□□□□ -1.66
LIG1-217ENST00000599165 H7BZZ5 65 aa4.69□□□□□ -1.66
LIG1-217ENST00000599165 KRTAP2-2Q9BYT5 123 aa4.66□□□□□ -1.66
LIG1-217ENST00000599165 KRTAP2-1Q9BYU5 128 aa4.66□□□□□ -1.66
LIG1-217ENST00000599165 SPATA8Q6RVD6 105 aa4.63□□□□□ -1.67
LIG1-217ENST00000599165 CAMK2N1Q7Z7J9 78 aa4.63□□□□□ -1.67
LIG1-217ENST00000599165 A0A0D9SG42 100 aa4.61□□□□□ -1.67
LIG1-217ENST00000599165 KRTAP19-7Q3SYF9 63 aa4.61□□□□□ -1.67
LIG1-217ENST00000599165 LCE3BQ5TA77 95 aa4.59□□□□□ -1.67
LIG1-217ENST00000599165 SERP1Q9Y6X1 66 aa4.58□□□□□ -1.68
LIG1-217ENST00000599165 A0A1B0GU33 70 aa4.57□□□□□ -1.68
LIG1-217ENST00000599165 KRTAP12-1P59990 96 aa4.57□□□□□ -1.68
LIG1-217ENST00000599165 SEC61GP60059 68 aa4.56□□□□□ -1.68
LIG1-217ENST00000599165 MT1EP04732 61 aa4.55□□□□□ -1.68
LIG1-217ENST00000599165 LCE5AQ5TCM9 118 aa4.53□□□□□ -1.68
LIG1-217ENST00000599165 SPINT4Q6UDR6 99 aa4.52□□□□□ -1.69
LIG1-217ENST00000599165 KRTAP19-3Q7Z4W3 81 aa4.49□□□□□ -1.69
LIG1-217ENST00000599165 ANAPC13Q9BS18 74 aa4.49□□□□□ -1.69
LIG1-217ENST00000599165 A8MU10 97 aa4.48□□□□□ -1.69
LIG1-217ENST00000599165 CCDC179H3BU77 68 aa4.48□□□□□ -1.69
LIG1-217ENST00000599165 A0A1B0GU69 56 aa4.46□□□□□ -1.7
LIG1-217ENST00000599165 KRTAP19-5Q3LI72 72 aa4.45□□□□□ -1.7
LIG1-217ENST00000599165 SVIPQ8NHG7 77 aa4.43□□□□□ -1.7
LIG1-217ENST00000599165 DSTQ03001 7570 aaKnown RBP4.43□□□□□ -1.7
LIG1-217ENST00000599165 SMIM26A0A096LP01 95 aa4.4□□□□□ -1.71
LIG1-217ENST00000599165 C10orf95Q9H7T3 257 aa4.39□□□□□ -1.71
LIG1-217ENST00000599165 MT1GP13640 62 aa4.36□□□□□ -1.71
LIG1-217ENST00000599165 LCE3AQ5TA76 89 aa4.35□□□□□ -1.71
LIG1-217ENST00000599165 ATP5EP56381 51 aaPredicted RBP4.34□□□□□ -1.71
LIG1-217ENST00000599165 MT1LQ93083 61 aa4.34□□□□□ -1.71
LIG1-217ENST00000599165 MT1MQ8N339 61 aa4.33□□□□□ -1.72
LIG1-217ENST00000599165 LINC01558Q9Y6Z2 57 aa4.33□□□□□ -1.72
LIG1-217ENST00000599165 KRTAP4-9Q9BYQ8 210 aa4.3□□□□□ -1.72
LIG1-217ENST00000599165 TNP1P09430 55 aa4.28□□□□□ -1.72
LIG1-217ENST00000599165 PRR15LQ9BU68 103 aa4.27□□□□□ -1.73
LIG1-217ENST00000599165 KRTAP4-3Q9BYR4 195 aa4.27□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms