RNA–Protein interactions for RNA: ENST00000598913.5

SAMD4B-208, Transcript of sterile alpha motif domain containing 4B, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SAMD4B, Length 2,877 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMD4B-208ENST00000598913 KRTAP10-8P60410 259 aa11.83□□□□□ -0.52
SAMD4B-208ENST00000598913 CRIPTQ9P021 101 aa11.83□□□□□ -0.52
SAMD4B-208ENST00000598913 Q5VSD8 79 aa11.82□□□□□ -0.52
SAMD4B-208ENST00000598913 COX6B2Q6YFQ2 88 aa11.82□□□□□ -0.52
SAMD4B-208ENST00000598913 H1FX-AS1Q4G0G2 97 aa11.79□□□□□ -0.52
SAMD4B-208ENST00000598913 RYR1P21817 5038 aa11.77□□□□□ -0.53
SAMD4B-208ENST00000598913 KRTAP21-3Q3LHN1 58 aa11.75□□□□□ -0.53
SAMD4B-208ENST00000598913 LRP2P98164 4655 aa11.74□□□□□ -0.53
SAMD4B-208ENST00000598913 A0A0D9SG42 100 aa11.68□□□□□ -0.54
SAMD4B-208ENST00000598913 XP32Q5T750 250 aa11.67□□□□□ -0.54
SAMD4B-208ENST00000598913 LINC01554Q52M75 96 aa11.66□□□□□ -0.54
SAMD4B-208ENST00000598913 KRTAP3-3Q9BYR6 98 aa11.66□□□□□ -0.54
SAMD4B-208ENST00000598913 EPPK1P58107 5090 aaKnown RBP11.63□□□□□ -0.55
SAMD4B-208ENST00000598913 KRTAP13-4Q3LI77 160 aa11.62□□□□□ -0.55
SAMD4B-208ENST00000598913 ABCA13Q86UQ4 5058 aa11.6□□□□□ -0.55
SAMD4B-208ENST00000598913 RPL37P61927 97 aaKnown RBP11.59□□□□□ -0.55
SAMD4B-208ENST00000598913 KRTAP10-6P60371 365 aaPredicted RBP11.56□□□□□ -0.56
SAMD4B-208ENST00000598913 P0C880 135 aa11.51□□□□□ -0.57
SAMD4B-208ENST00000598913 KRTAP3-2Q9BYR7 98 aa11.47□□□□□ -0.57
SAMD4B-208ENST00000598913 S4R3F8 94 aa11.47□□□□□ -0.57
SAMD4B-208ENST00000598913 MT1HL1P0DM35 61 aa11.46□□□□□ -0.57
SAMD4B-208ENST00000598913 KRTAP25-1Q3LHN0 102 aa11.37□□□□□ -0.59
SAMD4B-208ENST00000598913 K7ERS5 55 aa11.33□□□□□ -0.6
SAMD4B-208ENST00000598913 KRTAP4-5Q9BYR2 181 aa11.3□□□□□ -0.6
SAMD4B-208ENST00000598913 C10orf95Q9H7T3 257 aa11.24□□□□□ -0.61
SAMD4B-208ENST00000598913 KRTAP12-2P59991 146 aa11.2□□□□□ -0.62
SAMD4B-208ENST00000598913 SPINT4Q6UDR6 99 aa11.18□□□□□ -0.62
SAMD4B-208ENST00000598913 ROMO1P60602 79 aa11.18□□□□□ -0.62
SAMD4B-208ENST00000598913 MUC2Q02817 5179 aa11.13□□□□□ -0.63
SAMD4B-208ENST00000598913 TPRXLQ17RH7 258 aa11.1□□□□□ -0.63
SAMD4B-208ENST00000598913 KRTAP12-1P59990 96 aa10.99□□□□□ -0.65
SAMD4B-208ENST00000598913 HERC2O95714 4834 aa10.91□□□□□ -0.66
SAMD4B-208ENST00000598913 KRTAP4-1Q9BYQ7 146 aa10.89□□□□□ -0.67
SAMD4B-208ENST00000598913 MUC17Q685J3 4493 aa10.89□□□□□ -0.67
SAMD4B-208ENST00000598913 LORP23490 312 aaPredicted RBP10.87□□□□□ -0.67
SAMD4B-208ENST00000598913 M0QZ58 72 aa10.85□□□□□ -0.67
SAMD4B-208ENST00000598913 H3BS24 57 aa10.82□□□□□ -0.68
SAMD4B-208ENST00000598913 R4GN34 69 aa10.73□□□□□ -0.69
SAMD4B-208ENST00000598913 J3QL48 77 aa10.69□□□□□ -0.7
SAMD4B-208ENST00000598913 HERC1Q15751 4861 aa10.65□□□□□ -0.7
SAMD4B-208ENST00000598913 SEC61BP60468 96 aaKnown RBP10.59□□□□□ -0.71
SAMD4B-208ENST00000598913 FAT4Q6V0I7 4981 aa10.56□□□□□ -0.72
SAMD4B-208ENST00000598913 PCLOQ9Y6V0 5065 aa10.5□□□□□ -0.73
SAMD4B-208ENST00000598913 KRTAP19-2Q3LHN2 52 aa10.44□□□□□ -0.74
SAMD4B-208ENST00000598913 KRTAP15-1Q3LI76 137 aa10.38□□□□□ -0.75
SAMD4B-208ENST00000598913 NDUFAF8A1L188 74 aa10.37□□□□□ -0.75
SAMD4B-208ENST00000598913 RNF213Q63HN8 5207 aa10.35□□□□□ -0.75
SAMD4B-208ENST00000598913 BIRC6Q9NR09 4857 aa10.28□□□□□ -0.76
SAMD4B-208ENST00000598913 FLGP20930 4061 aaPredicted RBP10.26□□□□□ -0.77
SAMD4B-208ENST00000598913 CAMK2N1Q7Z7J9 78 aa10.24□□□□□ -0.77
SAMD4B-208ENST00000598913 HMCN2Q8NDA2 5059 aa10.2□□□□□ -0.78
SAMD4B-208ENST00000598913 UBR4Q5T4S7 5183 aa10.12□□□□□ -0.79
SAMD4B-208ENST00000598913 PLAC4Q8WY50 150 aa9.98□□□□□ -0.81
SAMD4B-208ENST00000598913 LCE2CQ5TA81 110 aa9.86□□□□□ -0.83
SAMD4B-208ENST00000598913 M0R2T5 61 aa9.84□□□□□ -0.83
SAMD4B-208ENST00000598913 TNP1P09430 55 aa9.67□□□□□ -0.86
SAMD4B-208ENST00000598913 KRTAP19-1Q8IUB9 90 aa9.66□□□□□ -0.86
SAMD4B-208ENST00000598913 MT1HP80294 61 aa9.6□□□□□ -0.87
SAMD4B-208ENST00000598913 PP632Q6XCG6 107 aa9.6□□□□□ -0.87
SAMD4B-208ENST00000598913 KRTAP10-10P60014 251 aa9.56□□□□□ -0.88
SAMD4B-208ENST00000598913 MT1FP04733 61 aa9.55□□□□□ -0.88
SAMD4B-208ENST00000598913 SPRR2GQ9BYE4 73 aa9.49□□□□□ -0.89
SAMD4B-208ENST00000598913 MT2AP02795 61 aa9.47□□□□□ -0.89
SAMD4B-208ENST00000598913 LUZP6Q538Z0 58 aa9.43□□□□□ -0.9
SAMD4B-208ENST00000598913 LCE3AQ5TA76 89 aa9.38□□□□□ -0.91
SAMD4B-208ENST00000598913 KRTAP9-8Q9BYQ0 159 aa9.37□□□□□ -0.91
SAMD4B-208ENST00000598913 USH2AO75445 5202 aa9.32□□□□□ -0.92
SAMD4B-208ENST00000598913 MT1BP07438 61 aa9.15□□□□□ -0.94
SAMD4B-208ENST00000598913 KMT2DO14686 5537 aa9.15□□□□□ -0.95
SAMD4B-208ENST00000598913 KRTAP10-5P60370 271 aa9.1□□□□□ -0.95
SAMD4B-208ENST00000598913 KRTAP23-1A1A580 65 aa9.09□□□□□ -0.95
SAMD4B-208ENST00000598913 MT1XP80297 61 aa9.09□□□□□ -0.95
SAMD4B-208ENST00000598913 SPRR5A0A1B0GTR4 108 aa9.05□□□□□ -0.96
SAMD4B-208ENST00000598913 KRTAP19-8Q3LI54 63 aa9.02□□□□□ -0.97
SAMD4B-208ENST00000598913 KRTAP10-7P60409 375 aaPredicted RBP9□□□□□ -0.97
SAMD4B-208ENST00000598913 KRTAP9-3Q9BYQ3 159 aa8.93□□□□□ -0.98
SAMD4B-208ENST00000598913 KRTAP10-12P60413 245 aa8.88□□□□□ -0.99
SAMD4B-208ENST00000598913 A0A0A0MQY5 61 aa8.86□□□□□ -0.99
SAMD4B-208ENST00000598913 KRTAP8-1Q8IUC2 63 aa8.85□□□□□ -0.99
SAMD4B-208ENST00000598913 KRTAP12-3P60328 96 aa8.82□□□□□ -1
SAMD4B-208ENST00000598913 LCE2BO14633 110 aa8.74□□□□□ -1.01
SAMD4B-208ENST00000598913 FSIP2Q5CZC0 6907 aa8.7□□□□□ -1.02
SAMD4B-208ENST00000598913 KRTAP4-8A0A0G2JLE6 195 aa8.61□□□□□ -1.03
SAMD4B-208ENST00000598913 KRTAP4-8Q9BYQ9 185 aa8.61□□□□□ -1.03
SAMD4B-208ENST00000598913 KRTAP19-5Q3LI72 72 aa8.56□□□□□ -1.04
SAMD4B-208ENST00000598913 PRO2289Q9P1D8 64 aa8.5□□□□□ -1.05
SAMD4B-208ENST00000598913 LCE2AQ5TA79 106 aaPredicted RBP8.33□□□□□ -1.08
SAMD4B-208ENST00000598913 KRTAP4-7Q9BYR0 210 aa8.33□□□□□ -1.08
SAMD4B-208ENST00000598913 SSPOA2VEC9 5147 aa8.26□□□□□ -1.09
SAMD4B-208ENST00000598913 LCE3CQ5T5A8 94 aa8.25□□□□□ -1.09
SAMD4B-208ENST00000598913 KRTAP9-6A8MVA2 160 aa8.21□□□□□ -1.1
SAMD4B-208ENST00000598913 KRTAP19-7Q3SYF9 63 aa8.11□□□□□ -1.11
SAMD4B-208ENST00000598913 MUC12Q9UKN1 5478 aa8.01□□□□□ -1.13
SAMD4B-208ENST00000598913 FCGBPQ9Y6R7 5405 aaPredicted RBP7.99□□□□□ -1.13
SAMD4B-208ENST00000598913 DSTQ03001 7570 aaKnown RBP7.93□□□□□ -1.14
SAMD4B-208ENST00000598913 MT1LQ93083 61 aa7.83□□□□□ -1.16
SAMD4B-208ENST00000598913 INE1O15225 51 aa7.82□□□□□ -1.16
SAMD4B-208ENST00000598913 MT1EP04732 61 aa7.81□□□□□ -1.16
SAMD4B-208ENST00000598913 KRTAP4-3Q9BYR4 195 aa7.81□□□□□ -1.16
SAMD4B-208ENST00000598913 LOC100996750A0A140TA64 210 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 55.8 ms