RNA–Protein interactions for RNA: ENST00000594862.1

SHKBP1-204, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 623 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-204ENST00000594862 A8MUN3 132 aa8.06□□□□□ -1.12
SHKBP1-204ENST00000594862 KRTAP3-3Q9BYR6 98 aa8.06□□□□□ -1.12
SHKBP1-204ENST00000594862 MP68P56378 58 aa8.05□□□□□ -1.12
SHKBP1-204ENST00000594862 KLKP1Q107X0 134 aa8.04□□□□□ -1.12
SHKBP1-204ENST00000594862 SPRR2GQ9BYE4 73 aa8.03□□□□□ -1.12
SHKBP1-204ENST00000594862 NDUFC1O43677 76 aa8.02□□□□□ -1.13
SHKBP1-204ENST00000594862 LINC00208Q96KT6 92 aa8.02□□□□□ -1.13
SHKBP1-204ENST00000594862 KRTAP6-3Q3LI67 103 aa8.01□□□□□ -1.13
SHKBP1-204ENST00000594862 OCR1Q9BZK8 76 aa8.01□□□□□ -1.13
SHKBP1-204ENST00000594862 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
SHKBP1-204ENST00000594862 CRIPTQ9P021 101 aa8.01□□□□□ -1.13
SHKBP1-204ENST00000594862 Q5VV11 94 aa8□□□□□ -1.13
SHKBP1-204ENST00000594862 H3BPC8 53 aa7.96□□□□□ -1.14
SHKBP1-204ENST00000594862 KRTAP19-8Q3LI54 63 aa7.96□□□□□ -1.14
SHKBP1-204ENST00000594862 H0YAA0 97 aa7.95□□□□□ -1.14
SHKBP1-204ENST00000594862 MT1BP07438 61 aa7.91□□□□□ -1.14
SHKBP1-204ENST00000594862 SCGB1A1P11684 91 aa7.91□□□□□ -1.14
SHKBP1-204ENST00000594862 A6NN06 94 aa7.87□□□□□ -1.15
SHKBP1-204ENST00000594862 DMAC1Q96GE9 116 aa7.79□□□□□ -1.16
SHKBP1-204ENST00000594862 ADM2Q7Z4H4 148 aa7.78□□□□□ -1.16
SHKBP1-204ENST00000594862 K7ERU9 68 aa7.77□□□□□ -1.17
SHKBP1-204ENST00000594862 KRTAP10-5P60370 271 aa7.77□□□□□ -1.17
SHKBP1-204ENST00000594862 SMIM20Q8N5G0 67 aa7.76□□□□□ -1.17
SHKBP1-204ENST00000594862 C20orf197Q8N268 126 aa7.75□□□□□ -1.17
SHKBP1-204ENST00000594862 MUC12Q9UKN1 5478 aa7.71□□□□□ -1.18
SHKBP1-204ENST00000594862 TRAV7A0A075B6U4 112 aa7.68□□□□□ -1.18
SHKBP1-204ENST00000594862 NEBP20929 6669 aa7.68□□□□□ -1.18
SHKBP1-204ENST00000594862 MT-ATP8P03928 68 aa7.67□□□□□ -1.18
SHKBP1-204ENST00000594862 R4GN34 69 aa7.64□□□□□ -1.19
SHKBP1-204ENST00000594862 ACYP2P14621 99 aa7.62□□□□□ -1.19
SHKBP1-204ENST00000594862 SPTSSBQ8NFR3 76 aa7.6□□□□□ -1.19
SHKBP1-204ENST00000594862 PRO2289Q9P1D8 64 aa7.6□□□□□ -1.19
SHKBP1-204ENST00000594862 KRTAP20-1Q3LI63 56 aa7.58□□□□□ -1.2
SHKBP1-204ENST00000594862 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
SHKBP1-204ENST00000594862 P0C880 135 aa7.57□□□□□ -1.2
SHKBP1-204ENST00000594862 M0QZ58 72 aa7.56□□□□□ -1.2
SHKBP1-204ENST00000594862 KRTAP3-2Q9BYR7 98 aa7.51□□□□□ -1.21
SHKBP1-204ENST00000594862 CHKB-CPT1BH3BT56 60 aa7.5□□□□□ -1.21
SHKBP1-204ENST00000594862 KRTAP5-9P26371 169 aa7.5□□□□□ -1.21
SHKBP1-204ENST00000594862 SPANXA2-OT1Q8N9U9 137 aa7.45□□□□□ -1.22
SHKBP1-204ENST00000594862 SNURFQ9Y675 71 aa7.45□□□□□ -1.22
SHKBP1-204ENST00000594862 KMT2DO14686 5537 aa7.45□□□□□ -1.22
SHKBP1-204ENST00000594862 MT1XP80297 61 aa7.44□□□□□ -1.22
SHKBP1-204ENST00000594862 SERP2Q8N6R1 65 aa7.43□□□□□ -1.22
SHKBP1-204ENST00000594862 MDN1Q9NU22 5596 aa7.43□□□□□ -1.22
SHKBP1-204ENST00000594862 LINC01554Q52M75 96 aa7.41□□□□□ -1.22
SHKBP1-204ENST00000594862 KRTAP12-2P59991 146 aa7.33□□□□□ -1.24
SHKBP1-204ENST00000594862 KRTAP2-3P0C7H8 128 aa7.3□□□□□ -1.24
SHKBP1-204ENST00000594862 KRTAP2-4Q9BYR9 128 aa7.3□□□□□ -1.24
SHKBP1-204ENST00000594862 KRTAP8-1Q8IUC2 63 aa7.23□□□□□ -1.25
SHKBP1-204ENST00000594862 SPRR2FQ96RM1 72 aa7.22□□□□□ -1.25
SHKBP1-204ENST00000594862 COX7CP15954 63 aa7.2□□□□□ -1.26
SHKBP1-204ENST00000594862 COA5Q86WW8 74 aa7.19□□□□□ -1.26
SHKBP1-204ENST00000594862 SEC61GP60059 68 aa7.14□□□□□ -1.27
SHKBP1-204ENST00000594862 SPRR2EP22531 72 aa7.12□□□□□ -1.27
SHKBP1-204ENST00000594862 SPRR2BP35325 72 aa7.12□□□□□ -1.27
SHKBP1-204ENST00000594862 SPRR2AP35326 72 aa7.12□□□□□ -1.27
SHKBP1-204ENST00000594862 KRTAP10-12P60413 245 aa7.1□□□□□ -1.27
SHKBP1-204ENST00000594862 SERP1Q9Y6X1 66 aa7.1□□□□□ -1.27
SHKBP1-204ENST00000594862 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
SHKBP1-204ENST00000594862 H7BZZ5 65 aa7.06□□□□□ -1.28
SHKBP1-204ENST00000594862 KRTAP13-4Q3LI77 160 aa7.06□□□□□ -1.28
SHKBP1-204ENST00000594862 CAMK2N1Q7Z7J9 78 aa7.05□□□□□ -1.28
SHKBP1-204ENST00000594862 KRTAP2-2Q9BYT5 123 aa7.05□□□□□ -1.28
SHKBP1-204ENST00000594862 KRTAP2-1Q9BYU5 128 aa7.05□□□□□ -1.28
SHKBP1-204ENST00000594862 KRTAP4-8A0A0G2JLE6 195 aa7.04□□□□□ -1.28
SHKBP1-204ENST00000594862 KRTAP4-8Q9BYQ9 185 aa7.04□□□□□ -1.28
SHKBP1-204ENST00000594862 LCE1AQ5T7P2 110 aa7.02□□□□□ -1.29
SHKBP1-204ENST00000594862 CYSTM1Q9H1C7 97 aa6.97□□□□□ -1.29
SHKBP1-204ENST00000594862 ANAPC13Q9BS18 74 aa6.96□□□□□ -1.3
SHKBP1-204ENST00000594862 A0A1B0GU33 70 aa6.94□□□□□ -1.3
SHKBP1-204ENST00000594862 A0A0D9SG42 100 aa6.89□□□□□ -1.31
SHKBP1-204ENST00000594862 SPRR2DP22532 72 aa6.89□□□□□ -1.31
SHKBP1-204ENST00000594862 SPATA8Q6RVD6 105 aa6.87□□□□□ -1.31
SHKBP1-204ENST00000594862 A0A1B0GU69 56 aa6.86□□□□□ -1.31
SHKBP1-204ENST00000594862 ATP5EP56381 51 aaPredicted RBP6.83□□□□□ -1.32
SHKBP1-204ENST00000594862 SPINT4Q6UDR6 99 aa6.83□□□□□ -1.32
SHKBP1-204ENST00000594862 SMIM26A0A096LP01 95 aa6.8□□□□□ -1.32
SHKBP1-204ENST00000594862 KRTAP12-1P59990 96 aa6.77□□□□□ -1.33
SHKBP1-204ENST00000594862 CCDC179H3BU77 68 aa6.75□□□□□ -1.33
SHKBP1-204ENST00000594862 LCE3BQ5TA77 95 aa6.75□□□□□ -1.33
SHKBP1-204ENST00000594862 PRR15LQ9BU68 103 aa6.73□□□□□ -1.33
SHKBP1-204ENST00000594862 KRTAP19-7Q3SYF9 63 aa6.64□□□□□ -1.35
SHKBP1-204ENST00000594862 A8MU10 97 aa6.61□□□□□ -1.35
SHKBP1-204ENST00000594862 TMEM258P61165 79 aa6.61□□□□□ -1.35
SHKBP1-204ENST00000594862 MT1EP04732 61 aa6.6□□□□□ -1.35
SHKBP1-204ENST00000594862 LINC01558Q9Y6Z2 57 aa6.59□□□□□ -1.35
SHKBP1-204ENST00000594862 LCE5AQ5TCM9 118 aa6.56□□□□□ -1.36
SHKBP1-204ENST00000594862 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
SHKBP1-204ENST00000594862 TNP1P09430 55 aa6.51□□□□□ -1.37
SHKBP1-204ENST00000594862 KRTAP19-5Q3LI72 72 aa6.49□□□□□ -1.37
SHKBP1-204ENST00000594862 UQCR11O14957 56 aa6.47□□□□□ -1.37
SHKBP1-204ENST00000594862 DSTQ03001 7570 aaKnown RBP6.46□□□□□ -1.38
SHKBP1-204ENST00000594862 GPR98Q8WXG9 6306 aa6.45□□□□□ -1.38
SHKBP1-204ENST00000594862 MT1GP13640 62 aa6.44□□□□□ -1.38
SHKBP1-204ENST00000594862 PP632Q6XCG6 107 aa6.44□□□□□ -1.38
SHKBP1-204ENST00000594862 C10orf95Q9H7T3 257 aa6.44□□□□□ -1.38
SHKBP1-204ENST00000594862 KRTAP4-9Q9BYQ8 210 aa6.41□□□□□ -1.38
SHKBP1-204ENST00000594862 LCE3AQ5TA76 89 aa6.37□□□□□ -1.39
SHKBP1-204ENST00000594862 MT1LQ93083 61 aa6.31□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 88.2 ms