RNA–Protein interactions for RNA: ENST00000593564.2

LSM4-202, Transcript of LSM4 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM4, Length 656 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM4-202ENST00000593564 LOC101927531A0A1B0GV80 90 aa10.27□□□□□ -0.77
LSM4-202ENST00000593564 LOC105371267A0A1B0GV96 52 aa10.27□□□□□ -0.77
LSM4-202ENST00000593564 TRAV22A0A0B4J277 110 aa10.26□□□□□ -0.77
LSM4-202ENST00000593564 H0YAA0 97 aa10.23□□□□□ -0.77
LSM4-202ENST00000593564 NDUFC1O43677 76 aa10.19□□□□□ -0.78
LSM4-202ENST00000593564 KRTAP2-3P0C7H8 128 aa10.16□□□□□ -0.78
LSM4-202ENST00000593564 KRTAP2-4Q9BYR9 128 aa10.16□□□□□ -0.78
LSM4-202ENST00000593564 ETDBQ3ZM63 59 aa10.13□□□□□ -0.79
LSM4-202ENST00000593564 F8W1H4 67 aa10.12□□□□□ -0.79
LSM4-202ENST00000593564 GTF2H5Q6ZYL4 71 aa10.12□□□□□ -0.79
LSM4-202ENST00000593564 SPRR2FQ96RM1 72 aa10.12□□□□□ -0.79
LSM4-202ENST00000593564 PRO2289Q9P1D8 64 aa10.11□□□□□ -0.79
LSM4-202ENST00000593564 A8MUN3 132 aa10.09□□□□□ -0.79
LSM4-202ENST00000593564 ADM2Q7Z4H4 148 aa10.08□□□□□ -0.8
LSM4-202ENST00000593564 ATOX1O00244 68 aa10.06□□□□□ -0.8
LSM4-202ENST00000593564 UQCRQO14949 82 aa10.06□□□□□ -0.8
LSM4-202ENST00000593564 MT1XP80297 61 aa10.06□□□□□ -0.8
LSM4-202ENST00000593564 SPRR2EP22531 72 aa10.05□□□□□ -0.8
LSM4-202ENST00000593564 SPRR2BP35325 72 aa10.05□□□□□ -0.8
LSM4-202ENST00000593564 SPRR2AP35326 72 aa10.05□□□□□ -0.8
LSM4-202ENST00000593564 H0Y9P7 68 aa10.04□□□□□ -0.8
LSM4-202ENST00000593564 ACYP1P07311 99 aa10.03□□□□□ -0.8
LSM4-202ENST00000593564 ATP5EP2Q5VTU8 51 aa9.98□□□□□ -0.81
LSM4-202ENST00000593564 PLAC4Q8WY50 150 aa9.98□□□□□ -0.81
LSM4-202ENST00000593564 KRTAP8-1Q8IUC2 63 aa9.96□□□□□ -0.82
LSM4-202ENST00000593564 HIST1H4AP62805 103 aaKnown RBP9.95□□□□□ -0.82
LSM4-202ENST00000593564 KRTAP12-2P59991 146 aa9.91□□□□□ -0.82
LSM4-202ENST00000593564 FAM240AA0A1B0GVK7 77 aa9.89□□□□□ -0.83
LSM4-202ENST00000593564 LCE1AQ5T7P2 110 aa9.88□□□□□ -0.83
LSM4-202ENST00000593564 R4GN34 69 aa9.86□□□□□ -0.83
LSM4-202ENST00000593564 LINC00208Q96KT6 92 aa9.84□□□□□ -0.83
LSM4-202ENST00000593564 KRTAP2-2Q9BYT5 123 aa9.82□□□□□ -0.84
LSM4-202ENST00000593564 KRTAP2-1Q9BYU5 128 aa9.82□□□□□ -0.84
LSM4-202ENST00000593564 P0C880 135 aa9.8□□□□□ -0.84
LSM4-202ENST00000593564 C20orf197Q8N268 126 aa9.8□□□□□ -0.84
LSM4-202ENST00000593564 M0QZ58 72 aa9.76□□□□□ -0.85
LSM4-202ENST00000593564 MP68P56378 58 aa9.74□□□□□ -0.85
LSM4-202ENST00000593564 KRTAP4-8A0A0G2JLE6 195 aa9.73□□□□□ -0.85
LSM4-202ENST00000593564 KRTAP4-8Q9BYQ9 185 aa9.73□□□□□ -0.85
LSM4-202ENST00000593564 SPRR2DP22532 72 aa9.72□□□□□ -0.85
LSM4-202ENST00000593564 OCR1Q9BZK8 76 aa9.7□□□□□ -0.86
LSM4-202ENST00000593564 LINC00643Q86TS7 51 aa9.69□□□□□ -0.86
LSM4-202ENST00000593564 PCP4L1A6NKN8 68 aa9.67□□□□□ -0.86
LSM4-202ENST00000593564 KRTAP3-2Q9BYR7 98 aa9.67□□□□□ -0.86
LSM4-202ENST00000593564 LINC01554Q52M75 96 aa9.63□□□□□ -0.87
LSM4-202ENST00000593564 DMAC1Q96GE9 116 aa9.62□□□□□ -0.87
LSM4-202ENST00000593564 KRTAP10-7P60409 375 aaPredicted RBP9.59□□□□□ -0.87
LSM4-202ENST00000593564 H3BPC8 53 aa9.56□□□□□ -0.88
LSM4-202ENST00000593564 KRTAP10-12P60413 245 aa9.56□□□□□ -0.88
LSM4-202ENST00000593564 LCE3BQ5TA77 95 aa9.49□□□□□ -0.89
LSM4-202ENST00000593564 TRAV7A0A075B6U4 112 aa9.4□□□□□ -0.9
LSM4-202ENST00000593564 MT-ATP8P03928 68 aa9.37□□□□□ -0.91
LSM4-202ENST00000593564 SCGB1A1P11684 91 aa9.32□□□□□ -0.92
LSM4-202ENST00000593564 ACYP2P14621 99 aa9.29□□□□□ -0.92
LSM4-202ENST00000593564 SPTSSBQ8NFR3 76 aa9.27□□□□□ -0.93
LSM4-202ENST00000593564 J3QR89 54 aa9.15□□□□□ -0.94
LSM4-202ENST00000593564 A0A1B0GV90 55 aa9.12□□□□□ -0.95
LSM4-202ENST00000593564 GPR98Q8WXG9 6306 aa9.12□□□□□ -0.95
LSM4-202ENST00000593564 CHKB-CPT1BH3BT56 60 aa9.11□□□□□ -0.95
LSM4-202ENST00000593564 DSTQ03001 7570 aaKnown RBP9.07□□□□□ -0.96
LSM4-202ENST00000593564 LCE5AQ5TCM9 118 aa9.03□□□□□ -0.96
LSM4-202ENST00000593564 KRTAP13-4Q3LI77 160 aa9.01□□□□□ -0.97
LSM4-202ENST00000593564 KRTAP19-7Q3SYF9 63 aa9.01□□□□□ -0.97
LSM4-202ENST00000593564 CAMK2N1Q7Z7J9 78 aa9.01□□□□□ -0.97
LSM4-202ENST00000593564 SMIM20Q8N5G0 67 aa8.99□□□□□ -0.97
LSM4-202ENST00000593564 MT1EP04732 61 aa8.95□□□□□ -0.98
LSM4-202ENST00000593564 KRTAP19-3Q7Z4W3 81 aa8.95□□□□□ -0.98
LSM4-202ENST00000593564 KRTAP4-9Q9BYQ8 210 aa8.91□□□□□ -0.98
LSM4-202ENST00000593564 SNURFQ9Y675 71 aa8.85□□□□□ -0.99
LSM4-202ENST00000593564 SPANXA2-OT1Q8N9U9 137 aa8.83□□□□□ -1
LSM4-202ENST00000593564 CYSTM1Q9H1C7 97 aa8.76□□□□□ -1.01
LSM4-202ENST00000593564 MT1GP13640 62 aa8.7□□□□□ -1.02
LSM4-202ENST00000593564 A0A0D9SG42 100 aa8.69□□□□□ -1.02
LSM4-202ENST00000593564 LCE1DQ5T752 114 aa8.68□□□□□ -1.02
LSM4-202ENST00000593564 KRTAP19-5Q3LI72 72 aa8.66□□□□□ -1.02
LSM4-202ENST00000593564 HMCN1Q96RW7 5635 aa8.64□□□□□ -1.03
LSM4-202ENST00000593564 PP632Q6XCG6 107 aa8.62□□□□□ -1.03
LSM4-202ENST00000593564 K7ERU9 68 aa8.6□□□□□ -1.03
LSM4-202ENST00000593564 SEC61GP60059 68 aa8.59□□□□□ -1.03
LSM4-202ENST00000593564 COA5Q86WW8 74 aa8.59□□□□□ -1.03
LSM4-202ENST00000593564 SERP1Q9Y6X1 66 aa8.59□□□□□ -1.03
LSM4-202ENST00000593564 LCE4AQ5TA78 99 aa8.58□□□□□ -1.04
LSM4-202ENST00000593564 SPATA8Q6RVD6 105 aa8.57□□□□□ -1.04
LSM4-202ENST00000593564 SPINT4Q6UDR6 99 aa8.57□□□□□ -1.04
LSM4-202ENST00000593564 MT1MQ8N339 61 aa8.54□□□□□ -1.04
LSM4-202ENST00000593564 SERP2Q8N6R1 65 aa8.54□□□□□ -1.04
LSM4-202ENST00000593564 MT4P47944 62 aa8.52□□□□□ -1.05
LSM4-202ENST00000593564 KRTAP12-1P59990 96 aa8.5□□□□□ -1.05
LSM4-202ENST00000593564 A0A1B0GU33 70 aa8.49□□□□□ -1.05
LSM4-202ENST00000593564 MT1LQ93083 61 aa8.48□□□□□ -1.05
LSM4-202ENST00000593564 AHNAK2Q8IVF2 5795 aa8.42□□□□□ -1.06
LSM4-202ENST00000593564 KRTAP5-4Q6L8H1 288 aa8.38□□□□□ -1.07
LSM4-202ENST00000593564 KRTAP4-3Q9BYR4 195 aa8.33□□□□□ -1.08
LSM4-202ENST00000593564 C10orf95Q9H7T3 257 aa8.3□□□□□ -1.08
LSM4-202ENST00000593564 LCE3AQ5TA76 89 aa8.28□□□□□ -1.08
LSM4-202ENST00000593564 SMIM26A0A096LP01 95 aa8.26□□□□□ -1.09
LSM4-202ENST00000593564 KRTAP5-10Q6L8G5 202 aa8.26□□□□□ -1.09
LSM4-202ENST00000593564 KRTAP4-6Q9BYQ5 205 aa8.25□□□□□ -1.09
LSM4-202ENST00000593564 TNP1P09430 55 aa8.21□□□□□ -1.1
LSM4-202ENST00000593564 A8MU10 97 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 105 ms