RNA–Protein interactions for RNA: ENST00000593093.5

CIRBP-242, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,528 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-242ENST00000593093 PKD1P98161 4303 aa7.54□□□□□ -1.2
CIRBP-242ENST00000593093 LUZP6Q538Z0 58 aa7.53□□□□□ -1.2
CIRBP-242ENST00000593093 TPRXLQ17RH7 258 aa7.53□□□□□ -1.2
CIRBP-242ENST00000593093 KRTAP21-3Q3LHN1 58 aa7.49□□□□□ -1.21
CIRBP-242ENST00000593093 DYNC1H1Q14204 4646 aaKnown RBP7.49□□□□□ -1.21
CIRBP-242ENST00000593093 KRTAP13-4Q3LI77 160 aa7.43□□□□□ -1.22
CIRBP-242ENST00000593093 KRTAP15-1Q3LI76 137 aa7.41□□□□□ -1.22
CIRBP-242ENST00000593093 S4R3F8 94 aa7.37□□□□□ -1.23
CIRBP-242ENST00000593093 MYCBP2O75592 4640 aa7.35□□□□□ -1.23
CIRBP-242ENST00000593093 RPS29P62273 56 aaKnown RBP7.35□□□□□ -1.23
CIRBP-242ENST00000593093 APOBP04114 4563 aaKnown RBP7.34□□□□□ -1.24
CIRBP-242ENST00000593093 KRTAP10-6P60371 365 aaPredicted RBP7.33□□□□□ -1.24
CIRBP-242ENST00000593093 A0A1B0GVY2 172 aa7.33□□□□□ -1.24
CIRBP-242ENST00000593093 LRP1Q07954 4544 aaKnown RBP7.32□□□□□ -1.24
CIRBP-242ENST00000593093 RYR2Q92736 4967 aa7.32□□□□□ -1.24
CIRBP-242ENST00000593093 KRTAP10-8P60410 259 aa7.3□□□□□ -1.24
CIRBP-242ENST00000593093 Q5VSD8 79 aa7.27□□□□□ -1.25
CIRBP-242ENST00000593093 KRTAP12-2P59991 146 aa7.26□□□□□ -1.25
CIRBP-242ENST00000593093 KIAA1109Q2LD37 5005 aa7.26□□□□□ -1.25
CIRBP-242ENST00000593093 KRTAP3-3Q9BYR6 98 aa7.25□□□□□ -1.25
CIRBP-242ENST00000593093 RYR3Q15413 4870 aa7.24□□□□□ -1.25
CIRBP-242ENST00000593093 KRTAP3-2Q9BYR7 98 aa7.22□□□□□ -1.25
CIRBP-242ENST00000593093 KRTAP10-4P60372 401 aaPredicted RBP7.18□□□□□ -1.26
CIRBP-242ENST00000593093 FAT3Q8TDW7 4589 aa7.14□□□□□ -1.27
CIRBP-242ENST00000593093 XP32Q5T750 250 aa7.13□□□□□ -1.27
CIRBP-242ENST00000593093 KRTAP12-1P59990 96 aa7.09□□□□□ -1.27
CIRBP-242ENST00000593093 M0QZ58 72 aa7.07□□□□□ -1.28
CIRBP-242ENST00000593093 KRTAP17-1Q9BYP8 105 aa7.07□□□□□ -1.28
CIRBP-242ENST00000593093 RYR1P21817 5038 aa7.06□□□□□ -1.28
CIRBP-242ENST00000593093 HSPG2P98160 4391 aa7.06□□□□□ -1.28
CIRBP-242ENST00000593093 EPPK1P58107 5090 aaKnown RBP7.06□□□□□ -1.28
CIRBP-242ENST00000593093 PKHD1L1Q86WI1 4243 aa7.04□□□□□ -1.28
CIRBP-242ENST00000593093 R4GN34 69 aa7.02□□□□□ -1.29
CIRBP-242ENST00000593093 PLAC4Q8WY50 150 aa6.97□□□□□ -1.29
CIRBP-242ENST00000593093 KRTAP4-5Q9BYR2 181 aa6.92□□□□□ -1.3
CIRBP-242ENST00000593093 TNXBP22105 4242 aa6.88□□□□□ -1.31
CIRBP-242ENST00000593093 LRP2P98164 4655 aa6.86□□□□□ -1.31
CIRBP-242ENST00000593093 SEC61BP60468 96 aaKnown RBP6.86□□□□□ -1.31
CIRBP-242ENST00000593093 LPAP08519 4548 aa6.85□□□□□ -1.31
CIRBP-242ENST00000593093 ABCA13Q86UQ4 5058 aa6.84□□□□□ -1.31
CIRBP-242ENST00000593093 MT1HL1P0DM35 61 aa6.84□□□□□ -1.31
CIRBP-242ENST00000593093 CAMK2N1Q7Z7J9 78 aa6.83□□□□□ -1.32
CIRBP-242ENST00000593093 LORP23490 312 aaPredicted RBP6.74□□□□□ -1.33
CIRBP-242ENST00000593093 HERC2O95714 4834 aa6.68□□□□□ -1.34
CIRBP-242ENST00000593093 MUC2Q02817 5179 aa6.62□□□□□ -1.35
CIRBP-242ENST00000593093 HERC1Q15751 4861 aa6.5□□□□□ -1.37
CIRBP-242ENST00000593093 PCLOQ9Y6V0 5065 aa6.41□□□□□ -1.38
CIRBP-242ENST00000593093 KRTAP4-1Q9BYQ7 146 aa6.41□□□□□ -1.38
CIRBP-242ENST00000593093 PP632Q6XCG6 107 aa6.4□□□□□ -1.38
CIRBP-242ENST00000593093 TNP1P09430 55 aa6.38□□□□□ -1.39
CIRBP-242ENST00000593093 BIRC6Q9NR09 4857 aa6.37□□□□□ -1.39
CIRBP-242ENST00000593093 RNF213Q63HN8 5207 aa6.34□□□□□ -1.39
CIRBP-242ENST00000593093 FAT4Q6V0I7 4981 aa6.29□□□□□ -1.4
CIRBP-242ENST00000593093 PRO2289Q9P1D8 64 aa6.27□□□□□ -1.41
CIRBP-242ENST00000593093 M0R2T5 61 aa6.2□□□□□ -1.42
CIRBP-242ENST00000593093 MUC17Q685J3 4493 aa6.2□□□□□ -1.42
CIRBP-242ENST00000593093 UBR4Q5T4S7 5183 aa6.2□□□□□ -1.42
CIRBP-242ENST00000593093 HMCN2Q8NDA2 5059 aa6.12□□□□□ -1.43
CIRBP-242ENST00000593093 KRTAP19-2Q3LHN2 52 aa5.98□□□□□ -1.45
CIRBP-242ENST00000593093 LCE3AQ5TA76 89 aa5.98□□□□□ -1.45
CIRBP-242ENST00000593093 INE1O15225 51 aa5.95□□□□□ -1.46
CIRBP-242ENST00000593093 FLGP20930 4061 aaPredicted RBP5.94□□□□□ -1.46
CIRBP-242ENST00000593093 KRTAP10-10P60014 251 aa5.92□□□□□ -1.46
CIRBP-242ENST00000593093 SPRR5A0A1B0GTR4 108 aa5.9□□□□□ -1.47
CIRBP-242ENST00000593093 KRTAP23-1A1A580 65 aa5.87□□□□□ -1.47
CIRBP-242ENST00000593093 LCE2CQ5TA81 110 aa5.81□□□□□ -1.48
CIRBP-242ENST00000593093 MT1HP80294 61 aa5.77□□□□□ -1.49
CIRBP-242ENST00000593093 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
CIRBP-242ENST00000593093 SPRR2GQ9BYE4 73 aa5.7□□□□□ -1.5
CIRBP-242ENST00000593093 MT1FP04733 61 aa5.66□□□□□ -1.5
CIRBP-242ENST00000593093 KRTAP12-3P60328 96 aa5.66□□□□□ -1.5
CIRBP-242ENST00000593093 MT2AP02795 61 aa5.64□□□□□ -1.51
CIRBP-242ENST00000593093 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
CIRBP-242ENST00000593093 USH2AO75445 5202 aa5.6□□□□□ -1.51
CIRBP-242ENST00000593093 KRTAP8-1Q8IUC2 63 aa5.56□□□□□ -1.52
CIRBP-242ENST00000593093 FSIP2Q5CZC0 6907 aa5.56□□□□□ -1.52
CIRBP-242ENST00000593093 KRTAP9-8Q9BYQ0 159 aa5.54□□□□□ -1.52
CIRBP-242ENST00000593093 KRTAP10-7P60409 375 aaPredicted RBP5.49□□□□□ -1.53
CIRBP-242ENST00000593093 KRTAP10-5P60370 271 aa5.47□□□□□ -1.53
CIRBP-242ENST00000593093 MT1XP80297 61 aa5.47□□□□□ -1.53
CIRBP-242ENST00000593093 LCE2DQ5TA82 110 aaPredicted RBP5.43□□□□□ -1.54
CIRBP-242ENST00000593093 KMT2DO14686 5537 aa5.42□□□□□ -1.54
CIRBP-242ENST00000593093 MT1BP07438 61 aa5.41□□□□□ -1.54
CIRBP-242ENST00000593093 KRTAP19-5Q3LI72 72 aa5.33□□□□□ -1.56
CIRBP-242ENST00000593093 KRTAP19-8Q3LI54 63 aa5.33□□□□□ -1.56
CIRBP-242ENST00000593093 LCE2AQ5TA79 106 aaPredicted RBP5.32□□□□□ -1.56
CIRBP-242ENST00000593093 KRTAP9-3Q9BYQ3 159 aa5.3□□□□□ -1.56
CIRBP-242ENST00000593093 LCE3CQ5T5A8 94 aa5.24□□□□□ -1.57
CIRBP-242ENST00000593093 LCE2BO14633 110 aa5.23□□□□□ -1.57
CIRBP-242ENST00000593093 KRTAP4-8A0A0G2JLE6 195 aa5.23□□□□□ -1.57
CIRBP-242ENST00000593093 KRTAP4-8Q9BYQ9 185 aa5.23□□□□□ -1.57
CIRBP-242ENST00000593093 KRTAP4-7Q9BYR0 210 aa5.19□□□□□ -1.58
CIRBP-242ENST00000593093 KRTAP9-6A8MVA2 160 aa5.1□□□□□ -1.59
CIRBP-242ENST00000593093 CRCT1Q9UGL9 99 aa5.03□□□□□ -1.6
CIRBP-242ENST00000593093 SSPOA2VEC9 5147 aa4.98□□□□□ -1.61
CIRBP-242ENST00000593093 DSTQ03001 7570 aaKnown RBP4.91□□□□□ -1.62
CIRBP-242ENST00000593093 FCGBPQ9Y6R7 5405 aaPredicted RBP4.85□□□□□ -1.63
CIRBP-242ENST00000593093 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.64
CIRBP-242ENST00000593093 SYNE1Q8NF91 8797 aaKnown RBP4.83□□□□□ -1.64
CIRBP-242ENST00000593093 OBSCNQ5VST9 7968 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms