RNA–Protein interactions for RNA: ENST00000591662.1

CNTNAP1-204, Transcript of contactin associated protein 1, humanhuman

TSL 1 (best)

Gene CNTNAP1, Length 4,499 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1-204ENST00000591662 DNAH1Q9P2D7 4330 aa5.16□□□□□ -1.58
CNTNAP1-204ENST00000591662 DNAH11Q96DT5 4516 aa5.15□□□□□ -1.59
CNTNAP1-204ENST00000591662 STARD9Q9P2P6 4700 aa5.1□□□□□ -1.59
CNTNAP1-204ENST00000591662 DNAH5Q8TE73 4624 aa5.1□□□□□ -1.59
CNTNAP1-204ENST00000591662 KRTAP10-4P60372 401 aaPredicted RBP5.08□□□□□ -1.6
CNTNAP1-204ENST00000591662 PRKDCP78527 4128 aaKnown RBP5.07□□□□□ -1.6
CNTNAP1-204ENST00000591662 VPS13DQ5THJ4 4388 aa5.06□□□□□ -1.6
CNTNAP1-204ENST00000591662 LYSTQ99698 3801 aa5.05□□□□□ -1.6
CNTNAP1-204ENST00000591662 MT1HL1P0DM35 61 aa5.04□□□□□ -1.6
CNTNAP1-204ENST00000591662 INE1O15225 51 aa5.03□□□□□ -1.6
CNTNAP1-204ENST00000591662 KRTAP23-1A1A580 65 aa5.01□□□□□ -1.61
CNTNAP1-204ENST00000591662 FAT1Q14517 4588 aa4.99□□□□□ -1.61
CNTNAP1-204ENST00000591662 DNAH17Q9UFH2 4485 aa4.99□□□□□ -1.61
CNTNAP1-204ENST00000591662 KMT2AQ03164 3969 aa4.98□□□□□ -1.61
CNTNAP1-204ENST00000591662 LRP1BQ9NZR2 4599 aa4.96□□□□□ -1.62
CNTNAP1-204ENST00000591662 KRTAP4-5Q9BYR2 181 aa4.94□□□□□ -1.62
CNTNAP1-204ENST00000591662 DNAH2Q9P225 4427 aa4.94□□□□□ -1.62
CNTNAP1-204ENST00000591662 DNAH8Q96JB1 4490 aa4.92□□□□□ -1.62
CNTNAP1-204ENST00000591662 DYNC1H1Q14204 4646 aaKnown RBP4.92□□□□□ -1.62
CNTNAP1-204ENST00000591662 DNAH3Q8TD57 4116 aa4.89□□□□□ -1.63
CNTNAP1-204ENST00000591662 CMYA5Q8N3K9 4069 aa4.88□□□□□ -1.63
CNTNAP1-204ENST00000591662 DNAH7Q8WXX0 4024 aa4.87□□□□□ -1.63
CNTNAP1-204ENST00000591662 MYCBP2O75592 4640 aa4.81□□□□□ -1.64
CNTNAP1-204ENST00000591662 DYNC2H1Q8NCM8 4307 aaKnown RBP4.81□□□□□ -1.64
CNTNAP1-204ENST00000591662 FRAS1Q86XX4 4008 aa4.8□□□□□ -1.64
CNTNAP1-204ENST00000591662 RYR1P21817 5038 aa4.78□□□□□ -1.64
CNTNAP1-204ENST00000591662 LORP23490 312 aaPredicted RBP4.78□□□□□ -1.64
CNTNAP1-204ENST00000591662 VPS13BQ7Z7G8 4022 aa4.78□□□□□ -1.64
CNTNAP1-204ENST00000591662 DNAH6Q9C0G6 4158 aa4.77□□□□□ -1.65
CNTNAP1-204ENST00000591662 KIAA1109Q2LD37 5005 aa4.75□□□□□ -1.65
CNTNAP1-204ENST00000591662 SACSQ9NZJ4 4579 aa4.75□□□□□ -1.65
CNTNAP1-204ENST00000591662 FAT2Q9NYQ8 4349 aa4.72□□□□□ -1.65
CNTNAP1-204ENST00000591662 HYDINQ4G0P3 5121 aa4.72□□□□□ -1.65
CNTNAP1-204ENST00000591662 HECTD4Q9Y4D8 3996 aa4.7□□□□□ -1.66
CNTNAP1-204ENST00000591662 FAT3Q8TDW7 4589 aa4.69□□□□□ -1.66
CNTNAP1-204ENST00000591662 LRP1Q07954 4544 aaKnown RBP4.67□□□□□ -1.66
CNTNAP1-204ENST00000591662 APOBP04114 4563 aaKnown RBP4.66□□□□□ -1.66
CNTNAP1-204ENST00000591662 RYR3Q15413 4870 aa4.65□□□□□ -1.66
CNTNAP1-204ENST00000591662 PKHD1P08F94 4074 aa4.64□□□□□ -1.67
CNTNAP1-204ENST00000591662 LCE3AQ5TA76 89 aa4.62□□□□□ -1.67
CNTNAP1-204ENST00000591662 KRTAP10-12P60413 245 aa4.62□□□□□ -1.67
CNTNAP1-204ENST00000591662 KRTAP12-3P60328 96 aa4.6□□□□□ -1.67
CNTNAP1-204ENST00000591662 KMT2CQ8NEZ4 4911 aaKnown RBP4.58□□□□□ -1.68
CNTNAP1-204ENST00000591662 KRTAP17-1Q9BYP8 105 aa4.58□□□□□ -1.68
CNTNAP1-204ENST00000591662 KRTAP4-1Q9BYQ7 146 aa4.57□□□□□ -1.68
CNTNAP1-204ENST00000591662 RYR2Q92736 4967 aa4.53□□□□□ -1.68
CNTNAP1-204ENST00000591662 SPRR5A0A1B0GTR4 108 aa4.49□□□□□ -1.69
CNTNAP1-204ENST00000591662 LRP2P98164 4655 aa4.45□□□□□ -1.7
CNTNAP1-204ENST00000591662 CRCT1Q9UGL9 99 aa4.44□□□□□ -1.7
CNTNAP1-204ENST00000591662 SPRR2GQ9BYE4 73 aa4.42□□□□□ -1.7
CNTNAP1-204ENST00000591662 PKD1P98161 4303 aa4.41□□□□□ -1.7
CNTNAP1-204ENST00000591662 HERC2O95714 4834 aa4.39□□□□□ -1.71
CNTNAP1-204ENST00000591662 KRTAP8-1Q8IUC2 63 aa4.39□□□□□ -1.71
CNTNAP1-204ENST00000591662 HSPG2P98160 4391 aa4.39□□□□□ -1.71
CNTNAP1-204ENST00000591662 MT1HP80294 61 aa4.33□□□□□ -1.72
CNTNAP1-204ENST00000591662 EPPK1P58107 5090 aaKnown RBP4.31□□□□□ -1.72
CNTNAP1-204ENST00000591662 MT2AP02795 61 aa4.29□□□□□ -1.72
CNTNAP1-204ENST00000591662 LPAP08519 4548 aa4.29□□□□□ -1.72
CNTNAP1-204ENST00000591662 MT1FP04733 61 aa4.2□□□□□ -1.74
CNTNAP1-204ENST00000591662 ABCA13Q86UQ4 5058 aa4.18□□□□□ -1.74
CNTNAP1-204ENST00000591662 PCLOQ9Y6V0 5065 aa4.17□□□□□ -1.74
CNTNAP1-204ENST00000591662 TNXBP22105 4242 aa4.17□□□□□ -1.74
CNTNAP1-204ENST00000591662 PKHD1L1Q86WI1 4243 aa4.17□□□□□ -1.74
CNTNAP1-204ENST00000591662 LCE3CQ5T5A8 94 aa4.17□□□□□ -1.74
CNTNAP1-204ENST00000591662 KRTAP19-1Q8IUB9 90 aa4.17□□□□□ -1.74
CNTNAP1-204ENST00000591662 BIRC6Q9NR09 4857 aa4.16□□□□□ -1.74
CNTNAP1-204ENST00000591662 KRTAP19-4Q3LI73 84 aa4.15□□□□□ -1.74
CNTNAP1-204ENST00000591662 MUC2Q02817 5179 aa4.14□□□□□ -1.75
CNTNAP1-204ENST00000591662 KRTAP19-8Q3LI54 63 aa4.12□□□□□ -1.75
CNTNAP1-204ENST00000591662 KRTAP10-5P60370 271 aa4.11□□□□□ -1.75
CNTNAP1-204ENST00000591662 HERC1Q15751 4861 aa4.09□□□□□ -1.76
CNTNAP1-204ENST00000591662 RNF213Q63HN8 5207 aa4.08□□□□□ -1.76
CNTNAP1-204ENST00000591662 KRTAP19-5Q3LI72 72 aa4.07□□□□□ -1.76
CNTNAP1-204ENST00000591662 SPRR2FQ96RM1 72 aa4.02□□□□□ -1.77
CNTNAP1-204ENST00000591662 LCE2CQ5TA81 110 aa4.02□□□□□ -1.77
CNTNAP1-204ENST00000591662 MT1XP80297 61 aa4.01□□□□□ -1.77
CNTNAP1-204ENST00000591662 FAT4Q6V0I7 4981 aa4.01□□□□□ -1.77
CNTNAP1-204ENST00000591662 KRTAP19-2Q3LHN2 52 aa3.99□□□□□ -1.77
CNTNAP1-204ENST00000591662 KRTAP10-7P60409 375 aaPredicted RBP3.98□□□□□ -1.77
CNTNAP1-204ENST00000591662 UBR4Q5T4S7 5183 aa3.97□□□□□ -1.77
CNTNAP1-204ENST00000591662 FSIP2Q5CZC0 6907 aa3.97□□□□□ -1.77
CNTNAP1-204ENST00000591662 MUC17Q685J3 4493 aa3.96□□□□□ -1.78
CNTNAP1-204ENST00000591662 KRTAP9-8Q9BYQ0 159 aa3.95□□□□□ -1.78
CNTNAP1-204ENST00000591662 MT1BP07438 61 aa3.94□□□□□ -1.78
CNTNAP1-204ENST00000591662 FLGP20930 4061 aaPredicted RBP3.91□□□□□ -1.78
CNTNAP1-204ENST00000591662 KRTAP9-3Q9BYQ3 159 aa3.82□□□□□ -1.8
CNTNAP1-204ENST00000591662 SYNE1Q8NF91 8797 aaKnown RBP3.81□□□□□ -1.8
CNTNAP1-204ENST00000591662 KRTAP12-4P60329 112 aa3.78□□□□□ -1.81
CNTNAP1-204ENST00000591662 HMCN2Q8NDA2 5059 aa3.77□□□□□ -1.81
CNTNAP1-204ENST00000591662 KRTAP4-8A0A0G2JLE6 195 aa3.75□□□□□ -1.81
CNTNAP1-204ENST00000591662 KRTAP4-8Q9BYQ9 185 aa3.75□□□□□ -1.81
CNTNAP1-204ENST00000591662 SPRR2EP22531 72 aa3.73□□□□□ -1.81
CNTNAP1-204ENST00000591662 SPRR2BP35325 72 aa3.73□□□□□ -1.81
CNTNAP1-204ENST00000591662 SPRR2AP35326 72 aa3.73□□□□□ -1.81
CNTNAP1-204ENST00000591662 LCE2BO14633 110 aa3.7□□□□□ -1.82
CNTNAP1-204ENST00000591662 MT1GP13640 62 aa3.66□□□□□ -1.82
CNTNAP1-204ENST00000591662 KRTAP2-3P0C7H8 128 aa3.63□□□□□ -1.83
CNTNAP1-204ENST00000591662 KRTAP2-4Q9BYR9 128 aa3.63□□□□□ -1.83
CNTNAP1-204ENST00000591662 KRTAP2-1Q9BYU5 128 aa3.63□□□□□ -1.83
CNTNAP1-204ENST00000591662 USH2AO75445 5202 aa3.61□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 100.9 ms