RNA–Protein interactions for RNA: ENST00000591519.1

VPS4B-207, Transcript of vacuolar protein sorting 4 homolog B, humanhuman

TSL 2 BASIC

Gene VPS4B, Length 551 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS4B-207ENST00000591519 CXCL6P80162 114 aa5.02□□□□□ -1.61
VPS4B-207ENST00000591519 KRTAP19-6Q3LI70 58 aa5.01□□□□□ -1.61
VPS4B-207ENST00000591519 ACYP1P07311 99 aa5□□□□□ -1.61
VPS4B-207ENST00000591519 FAM240AA0A1B0GVK7 77 aa4.97□□□□□ -1.61
VPS4B-207ENST00000591519 HIST1H4AP62805 103 aaKnown RBP4.97□□□□□ -1.61
VPS4B-207ENST00000591519 C7orf65Q6ZTY9 151 aa4.97□□□□□ -1.61
VPS4B-207ENST00000591519 ATP5EP2Q5VTU8 51 aa4.93□□□□□ -1.62
VPS4B-207ENST00000591519 TP53AIP1Q9HCN2 124 aa4.92□□□□□ -1.62
VPS4B-207ENST00000591519 A0A087WVE0 104 aa4.91□□□□□ -1.62
VPS4B-207ENST00000591519 C4orf26Q17RF5 130 aa4.91□□□□□ -1.62
VPS4B-207ENST00000591519 H1FX-AS1Q4G0G2 97 aa4.91□□□□□ -1.62
VPS4B-207ENST00000591519 LINC00643Q86TS7 51 aa4.91□□□□□ -1.62
VPS4B-207ENST00000591519 J3QR89 54 aa4.88□□□□□ -1.63
VPS4B-207ENST00000591519 KRTAP6-3Q3LI67 103 aa4.86□□□□□ -1.63
VPS4B-207ENST00000591519 TRAV22A0A0B4J277 110 aa4.85□□□□□ -1.63
VPS4B-207ENST00000591519 LCE1EQ5T753 118 aa4.85□□□□□ -1.63
VPS4B-207ENST00000591519 H0Y9P7 68 aa4.83□□□□□ -1.64
VPS4B-207ENST00000591519 C1orf64Q8NEQ6 169 aa4.83□□□□□ -1.64
VPS4B-207ENST00000591519 UQCRQO14949 82 aa4.82□□□□□ -1.64
VPS4B-207ENST00000591519 CYP4F30PQ9H0H9 118 aa4.82□□□□□ -1.64
VPS4B-207ENST00000591519 LOC101927531A0A1B0GV80 90 aa4.8□□□□□ -1.64
VPS4B-207ENST00000591519 C5orf47Q569G3 176 aa4.78□□□□□ -1.64
VPS4B-207ENST00000591519 S4R3F8 94 aa4.78□□□□□ -1.64
VPS4B-207ENST00000591519 ATOX1O00244 68 aa4.77□□□□□ -1.65
VPS4B-207ENST00000591519 LINC00208Q96KT6 92 aa4.76□□□□□ -1.65
VPS4B-207ENST00000591519 K7ERU9 68 aa4.75□□□□□ -1.65
VPS4B-207ENST00000591519 MT-ATP8P03928 68 aa4.75□□□□□ -1.65
VPS4B-207ENST00000591519 SCGB1A1P11684 91 aa4.75□□□□□ -1.65
VPS4B-207ENST00000591519 OCR1Q9BZK8 76 aa4.75□□□□□ -1.65
VPS4B-207ENST00000591519 LCA10Q71F78 164 aa4.74□□□□□ -1.65
VPS4B-207ENST00000591519 MP68P56378 58 aa4.73□□□□□ -1.65
VPS4B-207ENST00000591519 NEBP20929 6669 aa4.72□□□□□ -1.65
VPS4B-207ENST00000591519 KLKP1Q107X0 134 aa4.72□□□□□ -1.65
VPS4B-207ENST00000591519 MT1BP07438 61 aa4.7□□□□□ -1.66
VPS4B-207ENST00000591519 KRTAP19-8Q3LI54 63 aa4.7□□□□□ -1.66
VPS4B-207ENST00000591519 CSAG1Q6PB30 78 aa4.7□□□□□ -1.66
VPS4B-207ENST00000591519 SPRR2GQ9BYE4 73 aa4.7□□□□□ -1.66
VPS4B-207ENST00000591519 A6NN06 94 aa4.69□□□□□ -1.66
VPS4B-207ENST00000591519 FAM236AA0A1B0GUQ0 79 aa4.68□□□□□ -1.66
VPS4B-207ENST00000591519 FAM236BA0A1B0GV22 79 aa4.68□□□□□ -1.66
VPS4B-207ENST00000591519 Q5VV11 94 aa4.67□□□□□ -1.66
VPS4B-207ENST00000591519 IMUPQ9GZP8 106 aa4.67□□□□□ -1.66
VPS4B-207ENST00000591519 H3BPC8 53 aa4.64□□□□□ -1.67
VPS4B-207ENST00000591519 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
VPS4B-207ENST00000591519 TRAV7A0A075B6U4 112 aa4.61□□□□□ -1.67
VPS4B-207ENST00000591519 NDUFC1O43677 76 aa4.61□□□□□ -1.67
VPS4B-207ENST00000591519 A8MUN3 132 aa4.6□□□□□ -1.67
VPS4B-207ENST00000591519 MUC12Q9UKN1 5478 aa4.6□□□□□ -1.67
VPS4B-207ENST00000591519 KRTAP5-9P26371 169 aa4.59□□□□□ -1.67
VPS4B-207ENST00000591519 SMIM20Q8N5G0 67 aa4.59□□□□□ -1.67
VPS4B-207ENST00000591519 CRIPTQ9P021 101 aa4.56□□□□□ -1.68
VPS4B-207ENST00000591519 SNURFQ9Y675 71 aa4.55□□□□□ -1.68
VPS4B-207ENST00000591519 DMAC1Q96GE9 116 aa4.54□□□□□ -1.68
VPS4B-207ENST00000591519 KRTAP20-1Q3LI63 56 aa4.53□□□□□ -1.68
VPS4B-207ENST00000591519 KRTAP5-1Q6L8H4 278 aa4.52□□□□□ -1.69
VPS4B-207ENST00000591519 ADM2Q7Z4H4 148 aa4.52□□□□□ -1.69
VPS4B-207ENST00000591519 MT3P25713 68 aa4.51□□□□□ -1.69
VPS4B-207ENST00000591519 C20orf197Q8N268 126 aa4.5□□□□□ -1.69
VPS4B-207ENST00000591519 SERP2Q8N6R1 65 aa4.5□□□□□ -1.69
VPS4B-207ENST00000591519 KMT2DO14686 5537 aa4.5□□□□□ -1.69
VPS4B-207ENST00000591519 H0YAA0 97 aa4.47□□□□□ -1.69
VPS4B-207ENST00000591519 ACYP2P14621 99 aa4.47□□□□□ -1.69
VPS4B-207ENST00000591519 MDN1Q9NU22 5596 aa4.45□□□□□ -1.7
VPS4B-207ENST00000591519 CHKB-CPT1BH3BT56 60 aa4.44□□□□□ -1.7
VPS4B-207ENST00000591519 P0C880 135 aa4.43□□□□□ -1.7
VPS4B-207ENST00000591519 KRTAP2-3P0C7H8 128 aa4.41□□□□□ -1.7
VPS4B-207ENST00000591519 KRTAP2-4Q9BYR9 128 aa4.41□□□□□ -1.7
VPS4B-207ENST00000591519 COX7CP15954 63 aa4.39□□□□□ -1.71
VPS4B-207ENST00000591519 SPANXA2-OT1Q8N9U9 137 aa4.39□□□□□ -1.71
VPS4B-207ENST00000591519 SPTSSBQ8NFR3 76 aa4.39□□□□□ -1.71
VPS4B-207ENST00000591519 PRO2289Q9P1D8 64 aa4.38□□□□□ -1.71
VPS4B-207ENST00000591519 MT1XP80297 61 aa4.37□□□□□ -1.71
VPS4B-207ENST00000591519 R4GN34 69 aa4.37□□□□□ -1.71
VPS4B-207ENST00000591519 M0QZ58 72 aa4.36□□□□□ -1.71
VPS4B-207ENST00000591519 SPRR2FQ96RM1 72 aa4.36□□□□□ -1.71
VPS4B-207ENST00000591519 KRTAP4-4Q9BYR3 166 aa4.35□□□□□ -1.71
VPS4B-207ENST00000591519 CYSTM1Q9H1C7 97 aa4.35□□□□□ -1.71
VPS4B-207ENST00000591519 LINC01554Q52M75 96 aa4.34□□□□□ -1.71
VPS4B-207ENST00000591519 ANAPC13Q9BS18 74 aa4.34□□□□□ -1.71
VPS4B-207ENST00000591519 SPRR2EP22531 72 aa4.33□□□□□ -1.72
VPS4B-207ENST00000591519 SPRR2BP35325 72 aa4.33□□□□□ -1.72
VPS4B-207ENST00000591519 SPRR2AP35326 72 aa4.33□□□□□ -1.72
VPS4B-207ENST00000591519 KRTAP12-2P59991 146 aa4.32□□□□□ -1.72
VPS4B-207ENST00000591519 KRTAP5-4Q6L8H1 288 aa4.32□□□□□ -1.72
VPS4B-207ENST00000591519 COA5Q86WW8 74 aa4.32□□□□□ -1.72
VPS4B-207ENST00000591519 PLAC4Q8WY50 150 aa4.32□□□□□ -1.72
VPS4B-207ENST00000591519 KRTAP8-1Q8IUC2 63 aa4.3□□□□□ -1.72
VPS4B-207ENST00000591519 H7BZZ5 65 aa4.29□□□□□ -1.72
VPS4B-207ENST00000591519 KRTAP9-6A8MVA2 160 aa4.27□□□□□ -1.73
VPS4B-207ENST00000591519 KRTAP2-1Q9BYU5 128 aa4.27□□□□□ -1.73
VPS4B-207ENST00000591519 CCDC179H3BU77 68 aa4.26□□□□□ -1.73
VPS4B-207ENST00000591519 KRTAP13-4Q3LI77 160 aa4.19□□□□□ -1.74
VPS4B-207ENST00000591519 SPRR2DP22532 72 aa4.18□□□□□ -1.74
VPS4B-207ENST00000591519 SEC61GP60059 68 aa4.18□□□□□ -1.74
VPS4B-207ENST00000591519 KRTAP10-12P60413 245 aa4.18□□□□□ -1.74
VPS4B-207ENST00000591519 SERP1Q9Y6X1 66 aa4.18□□□□□ -1.74
VPS4B-207ENST00000591519 LCE1FQ5T754 118 aa4.16□□□□□ -1.74
VPS4B-207ENST00000591519 A0A0D9SG42 100 aa4.13□□□□□ -1.75
VPS4B-207ENST00000591519 SPATA8Q6RVD6 105 aa4.11□□□□□ -1.75
VPS4B-207ENST00000591519 A0A1B0GU33 70 aa4.1□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms