RNA–Protein interactions for RNA: ENST00000591226.1

TPM4-213, Transcript of tropomyosin 4, humanhuman

Gene TPM4, Length 2,672 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM4-213ENST00000591226 KIAA1109Q2LD37 5005 aa6.22□□□□□ -1.41
TPM4-213ENST00000591226 KRTAP10-8P60410 259 aa6.22□□□□□ -1.41
TPM4-213ENST00000591226 FAT3Q8TDW7 4589 aa6.2□□□□□ -1.42
TPM4-213ENST00000591226 IGKV2D-30A0A075B6S6 120 aa6.19□□□□□ -1.42
TPM4-213ENST00000591226 EPPK1P58107 5090 aaKnown RBP6.19□□□□□ -1.42
TPM4-213ENST00000591226 MYCBP2O75592 4640 aa6.16□□□□□ -1.42
TPM4-213ENST00000591226 C20orf166-AS1Q96NR2 134 aa6.16□□□□□ -1.42
TPM4-213ENST00000591226 A8MUU9 505 aa6.15□□□□□ -1.42
TPM4-213ENST00000591226 DMBT1Q9UGM3 2413 aaPredicted RBP6.14□□□□□ -1.43
TPM4-213ENST00000591226 SPATA8Q6RVD6 105 aa6.14□□□□□ -1.43
TPM4-213ENST00000591226 ROMO1P60602 79 aa6.12□□□□□ -1.43
TPM4-213ENST00000591226 DMAC1Q96GE9 116 aa6.12□□□□□ -1.43
TPM4-213ENST00000591226 MIR22HGQ0VDD5 57 aa6.12□□□□□ -1.43
TPM4-213ENST00000591226 A0A1B0GU69 56 aa6.11□□□□□ -1.43
TPM4-213ENST00000591226 MT1HL1P0DM35 61 aa6.1□□□□□ -1.43
TPM4-213ENST00000591226 ACYP2P14621 99 aa6.1□□□□□ -1.43
TPM4-213ENST00000591226 UQCR11O14957 56 aa6.05□□□□□ -1.44
TPM4-213ENST00000591226 KRTAP4-5Q9BYR2 181 aa6.02□□□□□ -1.45
TPM4-213ENST00000591226 P0C880 135 aa6.01□□□□□ -1.45
TPM4-213ENST00000591226 KRTAP25-1Q3LHN0 102 aa6□□□□□ -1.45
TPM4-213ENST00000591226 XP32Q5T750 250 aa5.99□□□□□ -1.45
TPM4-213ENST00000591226 KRTAP3-1Q9BYR8 98 aa5.98□□□□□ -1.45
TPM4-213ENST00000591226 RPL37P61927 97 aaKnown RBP5.97□□□□□ -1.45
TPM4-213ENST00000591226 CRIPTQ9P021 101 aa5.91□□□□□ -1.46
TPM4-213ENST00000591226 ABCA13Q86UQ4 5058 aa5.9□□□□□ -1.47
TPM4-213ENST00000591226 LUZP6Q538Z0 58 aa5.89□□□□□ -1.47
TPM4-213ENST00000591226 COX6B2Q6YFQ2 88 aa5.87□□□□□ -1.47
TPM4-213ENST00000591226 TPRXLQ17RH7 258 aa5.87□□□□□ -1.47
TPM4-213ENST00000591226 LRP2P98164 4655 aa5.84□□□□□ -1.47
TPM4-213ENST00000591226 HERC2O95714 4834 aa5.84□□□□□ -1.47
TPM4-213ENST00000591226 BIRC6Q9NR09 4857 aa5.84□□□□□ -1.47
TPM4-213ENST00000591226 LPAP08519 4548 aa5.83□□□□□ -1.48
TPM4-213ENST00000591226 NDUFAF8A1L188 74 aa5.8□□□□□ -1.48
TPM4-213ENST00000591226 H0YAA0 97 aa5.77□□□□□ -1.49
TPM4-213ENST00000591226 SPINT4Q6UDR6 99 aa5.75□□□□□ -1.49
TPM4-213ENST00000591226 CAMK2N1Q7Z7J9 78 aa5.72□□□□□ -1.49
TPM4-213ENST00000591226 S4R3F8 94 aa5.69□□□□□ -1.5
TPM4-213ENST00000591226 H1FX-AS1Q4G0G2 97 aa5.67□□□□□ -1.5
TPM4-213ENST00000591226 K7ERS5 55 aa5.66□□□□□ -1.5
TPM4-213ENST00000591226 KRTAP15-1Q3LI76 137 aa5.61□□□□□ -1.51
TPM4-213ENST00000591226 A0A1B0GU33 70 aa5.61□□□□□ -1.51
TPM4-213ENST00000591226 MUC17Q685J3 4493 aa5.6□□□□□ -1.51
TPM4-213ENST00000591226 KRTAP4-1Q9BYQ7 146 aa5.6□□□□□ -1.51
TPM4-213ENST00000591226 PCLOQ9Y6V0 5065 aa5.58□□□□□ -1.52
TPM4-213ENST00000591226 HERC1Q15751 4861 aa5.57□□□□□ -1.52
TPM4-213ENST00000591226 KRTAP10-6P60371 365 aaPredicted RBP5.56□□□□□ -1.52
TPM4-213ENST00000591226 C10orf95Q9H7T3 257 aa5.53□□□□□ -1.52
TPM4-213ENST00000591226 HMCN2Q8NDA2 5059 aa5.5□□□□□ -1.53
TPM4-213ENST00000591226 KRTAP13-4Q3LI77 160 aa5.47□□□□□ -1.53
TPM4-213ENST00000591226 KRTAP19-2Q3LHN2 52 aa5.46□□□□□ -1.54
TPM4-213ENST00000591226 MUC2Q02817 5179 aa5.42□□□□□ -1.54
TPM4-213ENST00000591226 A0A0D9SG42 100 aa5.4□□□□□ -1.55
TPM4-213ENST00000591226 FLGP20930 4061 aaPredicted RBP5.36□□□□□ -1.55
TPM4-213ENST00000591226 M0QZ58 72 aa5.3□□□□□ -1.56
TPM4-213ENST00000591226 KRTAP12-2P59991 146 aa5.26□□□□□ -1.57
TPM4-213ENST00000591226 R4GN34 69 aa5.25□□□□□ -1.57
TPM4-213ENST00000591226 KRTAP12-1P59990 96 aa5.24□□□□□ -1.57
TPM4-213ENST00000591226 UBR4Q5T4S7 5183 aa5.23□□□□□ -1.57
TPM4-213ENST00000591226 RNF213Q63HN8 5207 aa5.22□□□□□ -1.57
TPM4-213ENST00000591226 FAT4Q6V0I7 4981 aa5.2□□□□□ -1.58
TPM4-213ENST00000591226 MT1HP80294 61 aa5.12□□□□□ -1.59
TPM4-213ENST00000591226 M0R2T5 61 aa5.1□□□□□ -1.59
TPM4-213ENST00000591226 PLAC4Q8WY50 150 aa5.08□□□□□ -1.6
TPM4-213ENST00000591226 MT2AP02795 61 aa4.98□□□□□ -1.61
TPM4-213ENST00000591226 KRTAP19-4Q3LI73 84 aa4.97□□□□□ -1.61
TPM4-213ENST00000591226 MT1FP04733 61 aa4.96□□□□□ -1.62
TPM4-213ENST00000591226 KRTAP9-8Q9BYQ0 159 aa4.96□□□□□ -1.62
TPM4-213ENST00000591226 SPRR2GQ9BYE4 73 aa4.95□□□□□ -1.62
TPM4-213ENST00000591226 KRTAP19-1Q8IUB9 90 aa4.95□□□□□ -1.62
TPM4-213ENST00000591226 KRTAP10-10P60014 251 aa4.94□□□□□ -1.62
TPM4-213ENST00000591226 LCE5AQ5TCM9 118 aa4.83□□□□□ -1.64
TPM4-213ENST00000591226 KRTAP9-4Q9BYQ2 154 aa4.79□□□□□ -1.64
TPM4-213ENST00000591226 KRTAP19-8Q3LI54 63 aa4.78□□□□□ -1.64
TPM4-213ENST00000591226 PRO2289Q9P1D8 64 aa4.78□□□□□ -1.64
TPM4-213ENST00000591226 KRTAP9-3Q9BYQ3 159 aa4.77□□□□□ -1.65
TPM4-213ENST00000591226 MT1BP07438 61 aa4.74□□□□□ -1.65
TPM4-213ENST00000591226 TNP1P09430 55 aa4.73□□□□□ -1.65
TPM4-213ENST00000591226 PP632Q6XCG6 107 aa4.68□□□□□ -1.66
TPM4-213ENST00000591226 KRTAP10-5P60370 271 aa4.63□□□□□ -1.67
TPM4-213ENST00000591226 MT1XP80297 61 aa4.63□□□□□ -1.67
TPM4-213ENST00000591226 KRTAP9-9Q9BYP9 154 aa4.62□□□□□ -1.67
TPM4-213ENST00000591226 LCE4AQ5TA78 99 aa4.61□□□□□ -1.67
TPM4-213ENST00000591226 KRTAP9-6A0A140TA67 174 aa4.61□□□□□ -1.67
TPM4-213ENST00000591226 KRTAP9-7A8MTY7 169 aa4.61□□□□□ -1.67
TPM4-213ENST00000591226 SPRR5A0A1B0GTR4 108 aa4.55□□□□□ -1.68
TPM4-213ENST00000591226 LOC100996750A0A140TA64 210 aa4.53□□□□□ -1.68
TPM4-213ENST00000591226 LCE3AQ5TA76 89 aa4.53□□□□□ -1.68
TPM4-213ENST00000591226 KRTAP4-6Q9BYQ5 205 aa4.53□□□□□ -1.68
TPM4-213ENST00000591226 KRTAP10-7P60409 375 aaPredicted RBP4.48□□□□□ -1.69
TPM4-213ENST00000591226 USH2AO75445 5202 aa4.48□□□□□ -1.69
TPM4-213ENST00000591226 INE1O15225 51 aa4.48□□□□□ -1.69
TPM4-213ENST00000591226 KRTAP10-12P60413 245 aa4.46□□□□□ -1.7
TPM4-213ENST00000591226 KRTAP8-1Q8IUC2 63 aa4.41□□□□□ -1.7
TPM4-213ENST00000591226 LCE1FQ5T754 118 aa4.33□□□□□ -1.72
TPM4-213ENST00000591226 SSPOA2VEC9 5147 aa4.33□□□□□ -1.72
TPM4-213ENST00000591226 KRTAP12-3P60328 96 aa4.32□□□□□ -1.72
TPM4-213ENST00000591226 KRTAP4-8A0A0G2JLE6 195 aa4.27□□□□□ -1.73
TPM4-213ENST00000591226 KRTAP4-8Q9BYQ9 185 aa4.27□□□□□ -1.73
TPM4-213ENST00000591226 KMT2DO14686 5537 aa4.26□□□□□ -1.73
TPM4-213ENST00000591226 KRTAP19-5Q3LI72 72 aa4.25□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms