RNA–Protein interactions for RNA: ENST00000590541.1

RETREG3-210, Transcript of reticulophagy regulator family member 3, humanhuman

TSL 4

Gene RETREG3, Length 409 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-210ENST00000590541 KRTAP19-8Q3LI54 63 aa7.79□□□□□ -1.16
RETREG3-210ENST00000590541 ATP5EP2Q5VTU8 51 aa7.79□□□□□ -1.16
RETREG3-210ENST00000590541 FAM236AA0A1B0GUQ0 79 aa7.78□□□□□ -1.16
RETREG3-210ENST00000590541 FAM236BA0A1B0GV22 79 aa7.78□□□□□ -1.16
RETREG3-210ENST00000590541 CYP4F30PQ9H0H9 118 aa7.78□□□□□ -1.16
RETREG3-210ENST00000590541 TRAV22A0A0B4J277 110 aa7.77□□□□□ -1.17
RETREG3-210ENST00000590541 LCA10Q71F78 164 aa7.77□□□□□ -1.17
RETREG3-210ENST00000590541 LOC101927531A0A1B0GV80 90 aa7.75□□□□□ -1.17
RETREG3-210ENST00000590541 SPRR2GQ9BYE4 73 aa7.74□□□□□ -1.17
RETREG3-210ENST00000590541 UQCRQO14949 82 aa7.7□□□□□ -1.18
RETREG3-210ENST00000590541 HIST1H4AP62805 103 aaKnown RBP7.69□□□□□ -1.18
RETREG3-210ENST00000590541 ATOX1O00244 68 aa7.68□□□□□ -1.18
RETREG3-210ENST00000590541 KLKP1Q107X0 134 aa7.64□□□□□ -1.19
RETREG3-210ENST00000590541 LINC00643Q86TS7 51 aa7.63□□□□□ -1.19
RETREG3-210ENST00000590541 H0Y9P7 68 aa7.62□□□□□ -1.19
RETREG3-210ENST00000590541 SPRR2EP22531 72 aa7.62□□□□□ -1.19
RETREG3-210ENST00000590541 SPRR2BP35325 72 aa7.62□□□□□ -1.19
RETREG3-210ENST00000590541 SPRR2AP35326 72 aa7.62□□□□□ -1.19
RETREG3-210ENST00000590541 SPRR2FQ96RM1 72 aa7.59□□□□□ -1.19
RETREG3-210ENST00000590541 CRIPTQ9P021 101 aa7.59□□□□□ -1.19
RETREG3-210ENST00000590541 KRTAP2-2Q9BYT5 123 aa7.58□□□□□ -1.2
RETREG3-210ENST00000590541 KRTAP2-1Q9BYU5 128 aa7.58□□□□□ -1.2
RETREG3-210ENST00000590541 IMUPQ9GZP8 106 aa7.57□□□□□ -1.2
RETREG3-210ENST00000590541 A8MUN3 132 aa7.56□□□□□ -1.2
RETREG3-210ENST00000590541 NDUFC1O43677 76 aa7.55□□□□□ -1.2
RETREG3-210ENST00000590541 A0A087WVE0 104 aa7.54□□□□□ -1.2
RETREG3-210ENST00000590541 H0YAA0 97 aa7.52□□□□□ -1.21
RETREG3-210ENST00000590541 LINC00208Q96KT6 92 aa7.5□□□□□ -1.21
RETREG3-210ENST00000590541 MP68P56378 58 aa7.49□□□□□ -1.21
RETREG3-210ENST00000590541 OCR1Q9BZK8 76 aa7.47□□□□□ -1.21
RETREG3-210ENST00000590541 LCE1AQ5T7P2 110 aa7.46□□□□□ -1.22
RETREG3-210ENST00000590541 A0A1B0GV90 55 aa7.45□□□□□ -1.22
RETREG3-210ENST00000590541 J3QR89 54 aa7.45□□□□□ -1.22
RETREG3-210ENST00000590541 H3BPC8 53 aa7.42□□□□□ -1.22
RETREG3-210ENST00000590541 SPRR2DP22532 72 aa7.36□□□□□ -1.23
RETREG3-210ENST00000590541 ADM2Q7Z4H4 148 aa7.36□□□□□ -1.23
RETREG3-210ENST00000590541 KRTAP8-1Q8IUC2 63 aa7.36□□□□□ -1.23
RETREG3-210ENST00000590541 SCGB1A1P11684 91 aa7.33□□□□□ -1.24
RETREG3-210ENST00000590541 C20orf197Q8N268 126 aa7.29□□□□□ -1.24
RETREG3-210ENST00000590541 DMAC1Q96GE9 116 aa7.28□□□□□ -1.24
RETREG3-210ENST00000590541 MT1XP80297 61 aa7.27□□□□□ -1.25
RETREG3-210ENST00000590541 PRO2289Q9P1D8 64 aa7.25□□□□□ -1.25
RETREG3-210ENST00000590541 LCE3BQ5TA77 95 aa7.22□□□□□ -1.25
RETREG3-210ENST00000590541 R4GN34 69 aa7.22□□□□□ -1.25
RETREG3-210ENST00000590541 PLAC4Q8WY50 150 aa7.2□□□□□ -1.26
RETREG3-210ENST00000590541 KRTAP12-2P59991 146 aa7.19□□□□□ -1.26
RETREG3-210ENST00000590541 SMIM20Q8N5G0 67 aa7.18□□□□□ -1.26
RETREG3-210ENST00000590541 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
RETREG3-210ENST00000590541 KRTAP4-8A0A0G2JLE6 195 aa7.17□□□□□ -1.26
RETREG3-210ENST00000590541 KRTAP4-8Q9BYQ9 185 aa7.17□□□□□ -1.26
RETREG3-210ENST00000590541 P0C880 135 aa7.16□□□□□ -1.26
RETREG3-210ENST00000590541 GPR98Q8WXG9 6306 aa7.14□□□□□ -1.27
RETREG3-210ENST00000590541 ACYP2P14621 99 aa7.14□□□□□ -1.27
RETREG3-210ENST00000590541 LOC100996750A0A140TA64 210 aa7.12□□□□□ -1.27
RETREG3-210ENST00000590541 K7ERU9 68 aa7.12□□□□□ -1.27
RETREG3-210ENST00000590541 M0QZ58 72 aa7.12□□□□□ -1.27
RETREG3-210ENST00000590541 KRTAP4-6Q9BYQ5 205 aa7.12□□□□□ -1.27
RETREG3-210ENST00000590541 SPTSSBQ8NFR3 76 aa7.1□□□□□ -1.27
RETREG3-210ENST00000590541 MT-ATP8P03928 68 aa7.08□□□□□ -1.28
RETREG3-210ENST00000590541 LINC01554Q52M75 96 aa7□□□□□ -1.29
RETREG3-210ENST00000590541 CHKB-CPT1BH3BT56 60 aa6.98□□□□□ -1.29
RETREG3-210ENST00000590541 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
RETREG3-210ENST00000590541 SPANXA2-OT1Q8N9U9 137 aa6.93□□□□□ -1.3
RETREG3-210ENST00000590541 SNURFQ9Y675 71 aa6.91□□□□□ -1.3
RETREG3-210ENST00000590541 KRTAP10-12P60413 245 aa6.9□□□□□ -1.3
RETREG3-210ENST00000590541 KRTAP4-9Q9BYQ8 210 aa6.9□□□□□ -1.3
RETREG3-210ENST00000590541 DSTQ03001 7570 aaKnown RBP6.89□□□□□ -1.31
RETREG3-210ENST00000590541 SERP2Q8N6R1 65 aa6.86□□□□□ -1.31
RETREG3-210ENST00000590541 COA5Q86WW8 74 aa6.68□□□□□ -1.34
RETREG3-210ENST00000590541 LCE1DQ5T752 114 aa6.66□□□□□ -1.34
RETREG3-210ENST00000590541 SEC61GP60059 68 aa6.65□□□□□ -1.34
RETREG3-210ENST00000590541 KRTAP13-4Q3LI77 160 aa6.65□□□□□ -1.34
RETREG3-210ENST00000590541 LCE5AQ5TCM9 118 aa6.65□□□□□ -1.34
RETREG3-210ENST00000590541 H3BS24 57 aa6.64□□□□□ -1.35
RETREG3-210ENST00000590541 COX7CP15954 63 aa6.63□□□□□ -1.35
RETREG3-210ENST00000590541 CAMK2N1Q7Z7J9 78 aa6.63□□□□□ -1.35
RETREG3-210ENST00000590541 SERP1Q9Y6X1 66 aa6.63□□□□□ -1.35
RETREG3-210ENST00000590541 HMCN1Q96RW7 5635 aa6.56□□□□□ -1.36
RETREG3-210ENST00000590541 KRTAP19-3Q7Z4W3 81 aa6.54□□□□□ -1.36
RETREG3-210ENST00000590541 H7BZZ5 65 aa6.52□□□□□ -1.37
RETREG3-210ENST00000590541 KRTAP19-7Q3SYF9 63 aa6.52□□□□□ -1.37
RETREG3-210ENST00000590541 A0A1B0GU33 70 aa6.5□□□□□ -1.37
RETREG3-210ENST00000590541 MT4P47944 62 aa6.5□□□□□ -1.37
RETREG3-210ENST00000590541 KRTAP5-10Q6L8G5 202 aa6.49□□□□□ -1.37
RETREG3-210ENST00000590541 MT1EP04732 61 aa6.48□□□□□ -1.37
RETREG3-210ENST00000590541 AHNAK2Q8IVF2 5795 aa6.48□□□□□ -1.37
RETREG3-210ENST00000590541 LCE4AQ5TA78 99 aa6.47□□□□□ -1.37
RETREG3-210ENST00000590541 A0A0D9SG42 100 aa6.46□□□□□ -1.38
RETREG3-210ENST00000590541 SPATA8Q6RVD6 105 aa6.44□□□□□ -1.38
RETREG3-210ENST00000590541 CYSTM1Q9H1C7 97 aa6.43□□□□□ -1.38
RETREG3-210ENST00000590541 SPINT4Q6UDR6 99 aa6.4□□□□□ -1.38
RETREG3-210ENST00000590541 A0A1B0GU69 56 aa6.37□□□□□ -1.39
RETREG3-210ENST00000590541 KRTAP12-1P59990 96 aa6.36□□□□□ -1.39
RETREG3-210ENST00000590541 ANAPC13Q9BS18 74 aa6.36□□□□□ -1.39
RETREG3-210ENST00000590541 SMIM26A0A096LP01 95 aa6.35□□□□□ -1.39
RETREG3-210ENST00000590541 KRTAP4-12Q9BQ66 201 aa6.35□□□□□ -1.39
RETREG3-210ENST00000590541 MT1GP13640 62 aa6.3□□□□□ -1.4
RETREG3-210ENST00000590541 KRTAP5-7Q6L8G8 165 aa6.3□□□□□ -1.4
RETREG3-210ENST00000590541 KRTAP5-4Q6L8H1 288 aa6.28□□□□□ -1.4
RETREG3-210ENST00000590541 ATP5EP56381 51 aaPredicted RBP6.25□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 120.5 ms