RNA–Protein interactions for RNA: ENST00000590275.1

LRP3-202, Transcript of LDL receptor related protein 3, humanhuman

TSL 2

Gene LRP3, Length 1,078 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRP3-202ENST00000590275 SYNE2Q8WXH0 6885 aaKnown RBP9.57□□□□□ -0.88
LRP3-202ENST00000590275 KLKP1Q107X0 134 aa9.56□□□□□ -0.88
LRP3-202ENST00000590275 KRTAP19-8Q3LI54 63 aa9.56□□□□□ -0.88
LRP3-202ENST00000590275 OCR1Q9BZK8 76 aa9.56□□□□□ -0.88
LRP3-202ENST00000590275 ATOX1O00244 68 aa9.55□□□□□ -0.88
LRP3-202ENST00000590275 LINC00208Q96KT6 92 aa9.51□□□□□ -0.89
LRP3-202ENST00000590275 Q5VV11 94 aa9.46□□□□□ -0.9
LRP3-202ENST00000590275 NDUFC1O43677 76 aa9.39□□□□□ -0.91
LRP3-202ENST00000590275 A8MUN3 132 aa9.37□□□□□ -0.91
LRP3-202ENST00000590275 MP68P56378 58 aa9.37□□□□□ -0.91
LRP3-202ENST00000590275 IMUPQ9GZP8 106 aa9.36□□□□□ -0.91
LRP3-202ENST00000590275 A6NN06 94 aa9.35□□□□□ -0.91
LRP3-202ENST00000590275 H0YAA0 97 aa9.34□□□□□ -0.91
LRP3-202ENST00000590275 J3QR89 54 aa9.34□□□□□ -0.91
LRP3-202ENST00000590275 KRTAP10-5P60370 271 aa9.33□□□□□ -0.92
LRP3-202ENST00000590275 KRTAP6-3Q3LI67 103 aa9.32□□□□□ -0.92
LRP3-202ENST00000590275 CRIPTQ9P021 101 aa9.32□□□□□ -0.92
LRP3-202ENST00000590275 ADM2Q7Z4H4 148 aa9.29□□□□□ -0.92
LRP3-202ENST00000590275 H3BPC8 53 aa9.25□□□□□ -0.93
LRP3-202ENST00000590275 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
LRP3-202ENST00000590275 SCGB1A1P11684 91 aa9.22□□□□□ -0.93
LRP3-202ENST00000590275 DMAC1Q96GE9 116 aa9.21□□□□□ -0.94
LRP3-202ENST00000590275 P0C880 135 aa9.16□□□□□ -0.94
LRP3-202ENST00000590275 KRTAP3-2Q9BYR7 98 aa9.13□□□□□ -0.95
LRP3-202ENST00000590275 MUC12Q9UKN1 5478 aa9.08□□□□□ -0.96
LRP3-202ENST00000590275 TRAV7A0A075B6U4 112 aa9.05□□□□□ -0.96
LRP3-202ENST00000590275 K7ERU9 68 aa9.05□□□□□ -0.96
LRP3-202ENST00000590275 MT1XP80297 61 aa9.03□□□□□ -0.96
LRP3-202ENST00000590275 NEBP20929 6669 aa9□□□□□ -0.97
LRP3-202ENST00000590275 R4GN34 69 aa8.97□□□□□ -0.97
LRP3-202ENST00000590275 KMT2DO14686 5537 aa8.94□□□□□ -0.98
LRP3-202ENST00000590275 M0QZ58 72 aa8.94□□□□□ -0.98
LRP3-202ENST00000590275 KRTAP5-9P26371 169 aa8.94□□□□□ -0.98
LRP3-202ENST00000590275 SMIM20Q8N5G0 67 aa8.94□□□□□ -0.98
LRP3-202ENST00000590275 SNURFQ9Y675 71 aa8.92□□□□□ -0.98
LRP3-202ENST00000590275 ACYP2P14621 99 aa8.91□□□□□ -0.98
LRP3-202ENST00000590275 C20orf197Q8N268 126 aa8.9□□□□□ -0.98
LRP3-202ENST00000590275 PLAC4Q8WY50 150 aa8.88□□□□□ -0.99
LRP3-202ENST00000590275 MDN1Q9NU22 5596 aa8.86□□□□□ -0.99
LRP3-202ENST00000590275 LINC01554Q52M75 96 aa8.82□□□□□ -1
LRP3-202ENST00000590275 PRO2289Q9P1D8 64 aa8.82□□□□□ -1
LRP3-202ENST00000590275 SERP2Q8N6R1 65 aa8.74□□□□□ -1.01
LRP3-202ENST00000590275 CHKB-CPT1BH3BT56 60 aa8.72□□□□□ -1.01
LRP3-202ENST00000590275 KRTAP12-2P59991 146 aa8.71□□□□□ -1.02
LRP3-202ENST00000590275 SPANXA2-OT1Q8N9U9 137 aa8.71□□□□□ -1.02
LRP3-202ENST00000590275 SPTSSBQ8NFR3 76 aa8.71□□□□□ -1.02
LRP3-202ENST00000590275 KRTAP4-8A0A0G2JLE6 195 aa8.66□□□□□ -1.02
LRP3-202ENST00000590275 KRTAP4-8Q9BYQ9 185 aa8.66□□□□□ -1.02
LRP3-202ENST00000590275 SPRR2FQ96RM1 72 aa8.65□□□□□ -1.02
LRP3-202ENST00000590275 KRTAP10-7P60409 375 aaPredicted RBP8.63□□□□□ -1.03
LRP3-202ENST00000590275 KRTAP13-4Q3LI77 160 aa8.62□□□□□ -1.03
LRP3-202ENST00000590275 KRTAP8-1Q8IUC2 63 aa8.61□□□□□ -1.03
LRP3-202ENST00000590275 KRTAP20-1Q3LI63 56 aa8.58□□□□□ -1.04
LRP3-202ENST00000590275 CYSTM1Q9H1C7 97 aa8.54□□□□□ -1.04
LRP3-202ENST00000590275 KRTAP10-12P60413 245 aa8.53□□□□□ -1.04
LRP3-202ENST00000590275 COA5Q86WW8 74 aa8.52□□□□□ -1.05
LRP3-202ENST00000590275 SPRR2EP22531 72 aa8.51□□□□□ -1.05
LRP3-202ENST00000590275 SPRR2BP35325 72 aa8.51□□□□□ -1.05
LRP3-202ENST00000590275 SPRR2AP35326 72 aa8.51□□□□□ -1.05
LRP3-202ENST00000590275 COX7CP15954 63 aa8.49□□□□□ -1.05
LRP3-202ENST00000590275 LCE1AQ5T7P2 110 aa8.48□□□□□ -1.05
LRP3-202ENST00000590275 H7BZZ5 65 aa8.41□□□□□ -1.06
LRP3-202ENST00000590275 KRTAP2-3P0C7H8 128 aa8.36□□□□□ -1.07
LRP3-202ENST00000590275 KRTAP2-4Q9BYR9 128 aa8.36□□□□□ -1.07
LRP3-202ENST00000590275 SPATA8Q6RVD6 105 aa8.27□□□□□ -1.09
LRP3-202ENST00000590275 A0A0D9SG42 100 aa8.25□□□□□ -1.09
LRP3-202ENST00000590275 CAMK2N1Q7Z7J9 78 aa8.23□□□□□ -1.09
LRP3-202ENST00000590275 SPRR2DP22532 72 aa8.21□□□□□ -1.1
LRP3-202ENST00000590275 SERP1Q9Y6X1 66 aa8.21□□□□□ -1.1
LRP3-202ENST00000590275 SEC61GP60059 68 aa8.19□□□□□ -1.1
LRP3-202ENST00000590275 A0A1B0GU33 70 aa8.18□□□□□ -1.1
LRP3-202ENST00000590275 ANAPC13Q9BS18 74 aa8.16□□□□□ -1.1
LRP3-202ENST00000590275 KRTAP12-1P59990 96 aa8.13□□□□□ -1.11
LRP3-202ENST00000590275 CCDC179H3BU77 68 aa8.12□□□□□ -1.11
LRP3-202ENST00000590275 KRTAP2-2Q9BYT5 123 aa8.11□□□□□ -1.11
LRP3-202ENST00000590275 KRTAP2-1Q9BYU5 128 aa8.11□□□□□ -1.11
LRP3-202ENST00000590275 KRTAP19-7Q3SYF9 63 aa8.08□□□□□ -1.12
LRP3-202ENST00000590275 SPINT4Q6UDR6 99 aa8.08□□□□□ -1.12
LRP3-202ENST00000590275 A0A1B0GU69 56 aa8.01□□□□□ -1.13
LRP3-202ENST00000590275 A8MU10 97 aa8□□□□□ -1.13
LRP3-202ENST00000590275 LCE3BQ5TA77 95 aa8□□□□□ -1.13
LRP3-202ENST00000590275 MT1EP04732 61 aa7.98□□□□□ -1.13
LRP3-202ENST00000590275 LCE5AQ5TCM9 118 aa7.91□□□□□ -1.14
LRP3-202ENST00000590275 SMIM26A0A096LP01 95 aa7.88□□□□□ -1.15
LRP3-202ENST00000590275 KRTAP19-5Q3LI72 72 aa7.86□□□□□ -1.15
LRP3-202ENST00000590275 KRTAP19-3Q7Z4W3 81 aa7.85□□□□□ -1.15
LRP3-202ENST00000590275 ATP5EP56381 51 aaPredicted RBP7.82□□□□□ -1.16
LRP3-202ENST00000590275 C10orf95Q9H7T3 257 aa7.8□□□□□ -1.16
LRP3-202ENST00000590275 LINC01558Q9Y6Z2 57 aa7.78□□□□□ -1.16
LRP3-202ENST00000590275 DSTQ03001 7570 aaKnown RBP7.73□□□□□ -1.17
LRP3-202ENST00000590275 LCE3AQ5TA76 89 aa7.7□□□□□ -1.18
LRP3-202ENST00000590275 TMEM258P61165 79 aa7.68□□□□□ -1.18
LRP3-202ENST00000590275 PRR15LQ9BU68 103 aa7.68□□□□□ -1.18
LRP3-202ENST00000590275 MT1GP13640 62 aa7.64□□□□□ -1.19
LRP3-202ENST00000590275 MT1LQ93083 61 aa7.63□□□□□ -1.19
LRP3-202ENST00000590275 TNP1P09430 55 aa7.6□□□□□ -1.19
LRP3-202ENST00000590275 MT1MQ8N339 61 aa7.59□□□□□ -1.19
LRP3-202ENST00000590275 KRTAP4-9Q9BYQ8 210 aa7.51□□□□□ -1.21
LRP3-202ENST00000590275 UQCR11O14957 56 aa7.5□□□□□ -1.21
LRP3-202ENST00000590275 KRTAP4-3Q9BYR4 195 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms