RNA–Protein interactions for RNA: ENST00000588361.1

KDM4B-206, Transcript of lysine demethylase 4B, humanhuman

TSL 2

Gene KDM4B, Length 3,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM4B-206ENST00000588361 RYR2Q92736 4967 aa8.1□□□□□ -1.11
KDM4B-206ENST00000588361 KRTAP21-3Q3LHN1 58 aa8.06□□□□□ -1.12
KDM4B-206ENST00000588361 COX6B2Q6YFQ2 88 aa8.05□□□□□ -1.12
KDM4B-206ENST00000588361 K7ERS5 55 aa8.02□□□□□ -1.13
KDM4B-206ENST00000588361 A0A0D9SG42 100 aa8.01□□□□□ -1.13
KDM4B-206ENST00000588361 Q5VSD8 79 aa7.99□□□□□ -1.13
KDM4B-206ENST00000588361 HSPG2P98160 4391 aa7.98□□□□□ -1.13
KDM4B-206ENST00000588361 FAT3Q8TDW7 4589 aa7.98□□□□□ -1.13
KDM4B-206ENST00000588361 SPINT4Q6UDR6 99 aa7.97□□□□□ -1.13
KDM4B-206ENST00000588361 C10orf95Q9H7T3 257 aa7.97□□□□□ -1.13
KDM4B-206ENST00000588361 TNXBP22105 4242 aa7.94□□□□□ -1.14
KDM4B-206ENST00000588361 TPRXLQ17RH7 258 aa7.94□□□□□ -1.14
KDM4B-206ENST00000588361 KRTAP10-8P60410 259 aa7.92□□□□□ -1.14
KDM4B-206ENST00000588361 KRTAP13-4Q3LI77 160 aa7.91□□□□□ -1.14
KDM4B-206ENST00000588361 A0A0A0MQY5 61 aa7.91□□□□□ -1.14
KDM4B-206ENST00000588361 XP32Q5T750 250 aa7.88□□□□□ -1.15
KDM4B-206ENST00000588361 KRTAP17-1Q9BYP8 105 aa7.88□□□□□ -1.15
KDM4B-206ENST00000588361 RYR3Q15413 4870 aa7.87□□□□□ -1.15
KDM4B-206ENST00000588361 RPL37P61927 97 aaKnown RBP7.86□□□□□ -1.15
KDM4B-206ENST00000588361 KIAA1109Q2LD37 5005 aa7.85□□□□□ -1.15
KDM4B-206ENST00000588361 NDUFAF8A1L188 74 aa7.85□□□□□ -1.15
KDM4B-206ENST00000588361 KRTAP3-3Q9BYR6 98 aa7.83□□□□□ -1.16
KDM4B-206ENST00000588361 KRTAP10-6P60371 365 aaPredicted RBP7.82□□□□□ -1.16
KDM4B-206ENST00000588361 LPAP08519 4548 aa7.79□□□□□ -1.16
KDM4B-206ENST00000588361 RYR1P21817 5038 aa7.79□□□□□ -1.16
KDM4B-206ENST00000588361 S4R3F8 94 aa7.78□□□□□ -1.16
KDM4B-206ENST00000588361 LRP2P98164 4655 aa7.73□□□□□ -1.17
KDM4B-206ENST00000588361 KRTAP3-2Q9BYR7 98 aa7.71□□□□□ -1.17
KDM4B-206ENST00000588361 MT1HL1P0DM35 61 aa7.7□□□□□ -1.18
KDM4B-206ENST00000588361 KRTAP15-1Q3LI76 137 aa7.69□□□□□ -1.18
KDM4B-206ENST00000588361 J3QL48 77 aa7.67□□□□□ -1.18
KDM4B-206ENST00000588361 KRTAP12-2P59991 146 aa7.67□□□□□ -1.18
KDM4B-206ENST00000588361 EPPK1P58107 5090 aaKnown RBP7.61□□□□□ -1.19
KDM4B-206ENST00000588361 ABCA13Q86UQ4 5058 aa7.59□□□□□ -1.19
KDM4B-206ENST00000588361 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
KDM4B-206ENST00000588361 KRTAP12-1P59990 96 aa7.51□□□□□ -1.21
KDM4B-206ENST00000588361 M0QZ58 72 aa7.34□□□□□ -1.23
KDM4B-206ENST00000588361 R4GN34 69 aa7.3□□□□□ -1.24
KDM4B-206ENST00000588361 MUC2Q02817 5179 aa7.26□□□□□ -1.25
KDM4B-206ENST00000588361 KRTAP4-1Q9BYQ7 146 aa7.25□□□□□ -1.25
KDM4B-206ENST00000588361 SEC61BP60468 96 aaKnown RBP7.25□□□□□ -1.25
KDM4B-206ENST00000588361 LORP23490 312 aaPredicted RBP7.24□□□□□ -1.25
KDM4B-206ENST00000588361 HERC2O95714 4834 aa7.21□□□□□ -1.26
KDM4B-206ENST00000588361 PLAC4Q8WY50 150 aa7.19□□□□□ -1.26
KDM4B-206ENST00000588361 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
KDM4B-206ENST00000588361 LUZP6Q538Z0 58 aa7.13□□□□□ -1.27
KDM4B-206ENST00000588361 KRTAP19-2Q3LHN2 52 aa6.98□□□□□ -1.29
KDM4B-206ENST00000588361 CAMK2N1Q7Z7J9 78 aa6.97□□□□□ -1.29
KDM4B-206ENST00000588361 HERC1Q15751 4861 aa6.96□□□□□ -1.3
KDM4B-206ENST00000588361 FAT4Q6V0I7 4981 aa6.88□□□□□ -1.31
KDM4B-206ENST00000588361 PCLOQ9Y6V0 5065 aa6.85□□□□□ -1.31
KDM4B-206ENST00000588361 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
KDM4B-206ENST00000588361 BIRC6Q9NR09 4857 aa6.8□□□□□ -1.32
KDM4B-206ENST00000588361 RNF213Q63HN8 5207 aa6.73□□□□□ -1.33
KDM4B-206ENST00000588361 HMCN2Q8NDA2 5059 aa6.71□□□□□ -1.33
KDM4B-206ENST00000588361 PP632Q6XCG6 107 aa6.71□□□□□ -1.34
KDM4B-206ENST00000588361 M0R2T5 61 aa6.68□□□□□ -1.34
KDM4B-206ENST00000588361 UBR4Q5T4S7 5183 aa6.61□□□□□ -1.35
KDM4B-206ENST00000588361 TNP1P09430 55 aa6.6□□□□□ -1.35
KDM4B-206ENST00000588361 LCE2CQ5TA81 110 aa6.6□□□□□ -1.35
KDM4B-206ENST00000588361 LCE2DQ5TA82 110 aaPredicted RBP6.49□□□□□ -1.37
KDM4B-206ENST00000588361 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
KDM4B-206ENST00000588361 KRTAP10-10P60014 251 aa6.47□□□□□ -1.37
KDM4B-206ENST00000588361 MT1HP80294 61 aa6.45□□□□□ -1.38
KDM4B-206ENST00000588361 SPRR5A0A1B0GTR4 108 aa6.45□□□□□ -1.38
KDM4B-206ENST00000588361 SPRR2GQ9BYE4 73 aa6.43□□□□□ -1.38
KDM4B-206ENST00000588361 MT1FP04733 61 aa6.39□□□□□ -1.39
KDM4B-206ENST00000588361 MT2AP02795 61 aa6.36□□□□□ -1.39
KDM4B-206ENST00000588361 LCE3AQ5TA76 89 aa6.3□□□□□ -1.4
KDM4B-206ENST00000588361 KRTAP9-8Q9BYQ0 159 aa6.29□□□□□ -1.4
KDM4B-206ENST00000588361 KRTAP23-1A1A580 65 aa6.26□□□□□ -1.41
KDM4B-206ENST00000588361 PRO2289Q9P1D8 64 aa6.18□□□□□ -1.42
KDM4B-206ENST00000588361 MT1BP07438 61 aa6.13□□□□□ -1.43
KDM4B-206ENST00000588361 KRTAP19-8Q3LI54 63 aa6.11□□□□□ -1.43
KDM4B-206ENST00000588361 KRTAP10-5P60370 271 aa6.11□□□□□ -1.43
KDM4B-206ENST00000588361 MT1XP80297 61 aa6.1□□□□□ -1.43
KDM4B-206ENST00000588361 USH2AO75445 5202 aa6.04□□□□□ -1.44
KDM4B-206ENST00000588361 KRTAP10-12P60413 245 aa6.01□□□□□ -1.45
KDM4B-206ENST00000588361 KRTAP10-7P60409 375 aaPredicted RBP6.01□□□□□ -1.45
KDM4B-206ENST00000588361 KRTAP9-3Q9BYQ3 159 aa6.01□□□□□ -1.45
KDM4B-206ENST00000588361 KRTAP8-1Q8IUC2 63 aa6□□□□□ -1.45
KDM4B-206ENST00000588361 LCE2AQ5TA79 106 aaPredicted RBP5.98□□□□□ -1.45
KDM4B-206ENST00000588361 INE1O15225 51 aa5.97□□□□□ -1.45
KDM4B-206ENST00000588361 KRTAP12-3P60328 96 aa5.97□□□□□ -1.45
KDM4B-206ENST00000588361 KMT2DO14686 5537 aa5.93□□□□□ -1.46
KDM4B-206ENST00000588361 LCE2BO14633 110 aa5.91□□□□□ -1.46
KDM4B-206ENST00000588361 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
KDM4B-206ENST00000588361 KRTAP4-8A0A0G2JLE6 195 aa5.72□□□□□ -1.49
KDM4B-206ENST00000588361 KRTAP4-8Q9BYQ9 185 aa5.72□□□□□ -1.49
KDM4B-206ENST00000588361 FSIP2Q5CZC0 6907 aa5.63□□□□□ -1.51
KDM4B-206ENST00000588361 LCE3CQ5T5A8 94 aa5.58□□□□□ -1.52
KDM4B-206ENST00000588361 KRTAP4-7Q9BYR0 210 aa5.51□□□□□ -1.53
KDM4B-206ENST00000588361 KRTAP9-6A8MVA2 160 aa5.5□□□□□ -1.53
KDM4B-206ENST00000588361 KRTAP19-7Q3SYF9 63 aa5.43□□□□□ -1.54
KDM4B-206ENST00000588361 SSPOA2VEC9 5147 aa5.39□□□□□ -1.55
KDM4B-206ENST00000588361 MT1LQ93083 61 aa5.26□□□□□ -1.57
KDM4B-206ENST00000588361 MT1EP04732 61 aa5.26□□□□□ -1.57
KDM4B-206ENST00000588361 KRTAP2-3P0C7H8 128 aa5.25□□□□□ -1.57
KDM4B-206ENST00000588361 KRTAP2-4Q9BYR9 128 aa5.25□□□□□ -1.57
KDM4B-206ENST00000588361 KRTAP2-1Q9BYU5 128 aa5.25□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms