RNA–Protein interactions for RNA: ENST00000588278.1

TPGS1-202, Transcript of tubulin polyglutamylase complex subunit 1, humanhuman

Gene TPGS1, Length 2,873 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPGS1-202ENST00000588278 A0A1B0GVY2 172 aa8.27□□□□□ -1.09
TPGS1-202ENST00000588278 A0A0D9SG42 100 aa8.27□□□□□ -1.09
TPGS1-202ENST00000588278 EPPK1P58107 5090 aaKnown RBP8.26□□□□□ -1.09
TPGS1-202ENST00000588278 K7ERS5 55 aa8.24□□□□□ -1.09
TPGS1-202ENST00000588278 KRTAP10-4P60372 401 aaPredicted RBP8.24□□□□□ -1.09
TPGS1-202ENST00000588278 C10orf95Q9H7T3 257 aa8.23□□□□□ -1.09
TPGS1-202ENST00000588278 RPS29P62273 56 aaKnown RBP8.22□□□□□ -1.09
TPGS1-202ENST00000588278 SPINT4Q6UDR6 99 aa8.21□□□□□ -1.09
TPGS1-202ENST00000588278 PKHD1L1Q86WI1 4243 aa8.2□□□□□ -1.1
TPGS1-202ENST00000588278 TPRXLQ17RH7 258 aa8.19□□□□□ -1.1
TPGS1-202ENST00000588278 FAT3Q8TDW7 4589 aa8.18□□□□□ -1.1
TPGS1-202ENST00000588278 A0A0A0MQY5 61 aa8.18□□□□□ -1.1
TPGS1-202ENST00000588278 C20orf166-AS1Q96NR2 134 aa8.18□□□□□ -1.1
TPGS1-202ENST00000588278 HSPG2P98160 4391 aa8.18□□□□□ -1.1
TPGS1-202ENST00000588278 KRTAP13-4Q3LI77 160 aa8.16□□□□□ -1.1
TPGS1-202ENST00000588278 KRTAP17-1Q9BYP8 105 aa8.16□□□□□ -1.1
TPGS1-202ENST00000588278 Q5VSD8 79 aa8.1□□□□□ -1.11
TPGS1-202ENST00000588278 NDUFAF8A1L188 74 aa8.09□□□□□ -1.11
TPGS1-202ENST00000588278 RPL37P61927 97 aaKnown RBP8.08□□□□□ -1.12
TPGS1-202ENST00000588278 RYR1P21817 5038 aa8.08□□□□□ -1.12
TPGS1-202ENST00000588278 KRTAP10-6P60371 365 aaPredicted RBP8.06□□□□□ -1.12
TPGS1-202ENST00000588278 KRTAP3-3Q9BYR6 98 aa7.97□□□□□ -1.13
TPGS1-202ENST00000588278 TNXBP22105 4242 aa7.97□□□□□ -1.13
TPGS1-202ENST00000588278 ABCA13Q86UQ4 5058 aa7.97□□□□□ -1.13
TPGS1-202ENST00000588278 LPAP08519 4548 aa7.95□□□□□ -1.14
TPGS1-202ENST00000588278 KRTAP10-8P60410 259 aa7.95□□□□□ -1.14
TPGS1-202ENST00000588278 KRTAP3-2Q9BYR7 98 aa7.95□□□□□ -1.14
TPGS1-202ENST00000588278 KRTAP15-1Q3LI76 137 aa7.92□□□□□ -1.14
TPGS1-202ENST00000588278 KRTAP12-2P59991 146 aa7.92□□□□□ -1.14
TPGS1-202ENST00000588278 XP32Q5T750 250 aa7.9□□□□□ -1.14
TPGS1-202ENST00000588278 S4R3F8 94 aa7.88□□□□□ -1.15
TPGS1-202ENST00000588278 LRP2P98164 4655 aa7.84□□□□□ -1.15
TPGS1-202ENST00000588278 KRTAP4-5Q9BYR2 181 aa7.82□□□□□ -1.16
TPGS1-202ENST00000588278 MT1HL1P0DM35 61 aa7.75□□□□□ -1.17
TPGS1-202ENST00000588278 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
TPGS1-202ENST00000588278 MUC2Q02817 5179 aa7.72□□□□□ -1.17
TPGS1-202ENST00000588278 HERC2O95714 4834 aa7.68□□□□□ -1.18
TPGS1-202ENST00000588278 HERC1Q15751 4861 aa7.6□□□□□ -1.19
TPGS1-202ENST00000588278 PCLOQ9Y6V0 5065 aa7.53□□□□□ -1.2
TPGS1-202ENST00000588278 M0QZ58 72 aa7.44□□□□□ -1.22
TPGS1-202ENST00000588278 J3QL48 77 aa7.43□□□□□ -1.22
TPGS1-202ENST00000588278 PLAC4Q8WY50 150 aa7.4□□□□□ -1.23
TPGS1-202ENST00000588278 RNF213Q63HN8 5207 aa7.38□□□□□ -1.23
TPGS1-202ENST00000588278 LUZP6Q538Z0 58 aa7.34□□□□□ -1.23
TPGS1-202ENST00000588278 BIRC6Q9NR09 4857 aa7.34□□□□□ -1.23
TPGS1-202ENST00000588278 R4GN34 69 aa7.34□□□□□ -1.24
TPGS1-202ENST00000588278 FAT4Q6V0I7 4981 aa7.32□□□□□ -1.24
TPGS1-202ENST00000588278 LORP23490 312 aaPredicted RBP7.31□□□□□ -1.24
TPGS1-202ENST00000588278 SEC61BP60468 96 aaKnown RBP7.3□□□□□ -1.24
TPGS1-202ENST00000588278 KRTAP4-1Q9BYQ7 146 aa7.29□□□□□ -1.24
TPGS1-202ENST00000588278 UBR4Q5T4S7 5183 aa7.24□□□□□ -1.25
TPGS1-202ENST00000588278 MUC17Q685J3 4493 aa7.17□□□□□ -1.26
TPGS1-202ENST00000588278 HMCN2Q8NDA2 5059 aa7.1□□□□□ -1.27
TPGS1-202ENST00000588278 CAMK2N1Q7Z7J9 78 aa7.06□□□□□ -1.28
TPGS1-202ENST00000588278 KRTAP19-2Q3LHN2 52 aa6.95□□□□□ -1.3
TPGS1-202ENST00000588278 PP632Q6XCG6 107 aa6.89□□□□□ -1.31
TPGS1-202ENST00000588278 FLGP20930 4061 aaPredicted RBP6.83□□□□□ -1.32
TPGS1-202ENST00000588278 M0R2T5 61 aa6.8□□□□□ -1.32
TPGS1-202ENST00000588278 TNP1P09430 55 aa6.72□□□□□ -1.33
TPGS1-202ENST00000588278 SPRR5A0A1B0GTR4 108 aa6.64□□□□□ -1.35
TPGS1-202ENST00000588278 LCE2CQ5TA81 110 aa6.63□□□□□ -1.35
TPGS1-202ENST00000588278 KRTAP10-10P60014 251 aa6.54□□□□□ -1.36
TPGS1-202ENST00000588278 USH2AO75445 5202 aa6.54□□□□□ -1.36
TPGS1-202ENST00000588278 MT1HP80294 61 aa6.51□□□□□ -1.37
TPGS1-202ENST00000588278 KRTAP19-1Q8IUB9 90 aa6.48□□□□□ -1.37
TPGS1-202ENST00000588278 LCE3AQ5TA76 89 aa6.44□□□□□ -1.38
TPGS1-202ENST00000588278 MT1FP04733 61 aa6.43□□□□□ -1.38
TPGS1-202ENST00000588278 SPRR2GQ9BYE4 73 aa6.42□□□□□ -1.38
TPGS1-202ENST00000588278 KRTAP23-1A1A580 65 aa6.4□□□□□ -1.38
TPGS1-202ENST00000588278 MT2AP02795 61 aa6.39□□□□□ -1.39
TPGS1-202ENST00000588278 FSIP2Q5CZC0 6907 aa6.39□□□□□ -1.39
TPGS1-202ENST00000588278 PRO2289Q9P1D8 64 aa6.35□□□□□ -1.39
TPGS1-202ENST00000588278 KRTAP9-8Q9BYQ0 159 aa6.32□□□□□ -1.4
TPGS1-202ENST00000588278 KMT2DO14686 5537 aa6.24□□□□□ -1.41
TPGS1-202ENST00000588278 MT1BP07438 61 aa6.14□□□□□ -1.43
TPGS1-202ENST00000588278 INE1O15225 51 aa6.12□□□□□ -1.43
TPGS1-202ENST00000588278 KRTAP10-5P60370 271 aa6.1□□□□□ -1.43
TPGS1-202ENST00000588278 MT1XP80297 61 aa6.1□□□□□ -1.43
TPGS1-202ENST00000588278 KRTAP19-8Q3LI54 63 aa6.09□□□□□ -1.43
TPGS1-202ENST00000588278 KRTAP8-1Q8IUC2 63 aa6.08□□□□□ -1.44
TPGS1-202ENST00000588278 KRTAP12-3P60328 96 aa6.04□□□□□ -1.44
TPGS1-202ENST00000588278 KRTAP9-3Q9BYQ3 159 aa6.03□□□□□ -1.44
TPGS1-202ENST00000588278 KRTAP10-7P60409 375 aaPredicted RBP6.02□□□□□ -1.45
TPGS1-202ENST00000588278 KRTAP10-12P60413 245 aa6.02□□□□□ -1.45
TPGS1-202ENST00000588278 LCE2BO14633 110 aa5.88□□□□□ -1.47
TPGS1-202ENST00000588278 LCE2AQ5TA79 106 aaPredicted RBP5.85□□□□□ -1.47
TPGS1-202ENST00000588278 SSPOA2VEC9 5147 aa5.81□□□□□ -1.48
TPGS1-202ENST00000588278 KRTAP4-8A0A0G2JLE6 195 aa5.76□□□□□ -1.49
TPGS1-202ENST00000588278 KRTAP4-8Q9BYQ9 185 aa5.76□□□□□ -1.49
TPGS1-202ENST00000588278 KRTAP19-5Q3LI72 72 aa5.75□□□□□ -1.49
TPGS1-202ENST00000588278 KRTAP9-6A8MVA2 160 aa5.68□□□□□ -1.5
TPGS1-202ENST00000588278 LCE3CQ5T5A8 94 aa5.67□□□□□ -1.5
TPGS1-202ENST00000588278 KRTAP4-7Q9BYR0 210 aa5.59□□□□□ -1.51
TPGS1-202ENST00000588278 MUC12Q9UKN1 5478 aa5.56□□□□□ -1.52
TPGS1-202ENST00000588278 FCGBPQ9Y6R7 5405 aaPredicted RBP5.54□□□□□ -1.52
TPGS1-202ENST00000588278 DSTQ03001 7570 aaKnown RBP5.5□□□□□ -1.53
TPGS1-202ENST00000588278 KRTAP19-7Q3SYF9 63 aa5.42□□□□□ -1.54
TPGS1-202ENST00000588278 KRTAP2-3P0C7H8 128 aa5.4□□□□□ -1.54
TPGS1-202ENST00000588278 KRTAP2-4Q9BYR9 128 aa5.4□□□□□ -1.54
TPGS1-202ENST00000588278 KRTAP2-1Q9BYU5 128 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms