RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	HECTD4	Q9Y4D8	3996 aa		5	□□□□□ -1.61
CACNA2D4-222	ENST00000587995	VPS13B	Q7Z7G8	4022 aa		4.97	□□□□□ -1.61
CACNA2D4-222	ENST00000587995	SEC61B	P60468	96 aa	Known RBP	4.97	□□□□□ -1.61
CACNA2D4-222	ENST00000587995	DYNC2H1	Q8NCM8	4307 aa	Known RBP	4.94	□□□□□ -1.62
CACNA2D4-222	ENST00000587995	MYCBP2	O75592	4640 aa		4.94	□□□□□ -1.62
CACNA2D4-222	ENST00000587995	KRTAP10-4	P60372	401 aa	Predicted RBP	4.94	□□□□□ -1.62
CACNA2D4-222	ENST00000587995	DYNC1H1	Q14204	4646 aa	Known RBP	4.93	□□□□□ -1.62
CACNA2D4-222	ENST00000587995	KRTAP13-4	Q3LI77	160 aa		4.93	□□□□□ -1.62
CACNA2D4-222	ENST00000587995	KRTAP10-6	P60371	365 aa	Predicted RBP	4.89	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	HYDIN	Q4G0P3	5121 aa		4.89	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	TPRXL	Q17RH7	258 aa		4.88	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	KRTAP12-2	P59991	146 aa		4.86	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	ALMS1	Q8TCU4	4167 aa		4.86	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	PKHD1	P08F94	4074 aa		4.86	□□□□□ -1.63
CACNA2D4-222	ENST00000587995		M0R2T5	61 aa		4.85	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	KRTAP3-3	Q9BYR6	98 aa		4.84	□□□□□ -1.63
CACNA2D4-222	ENST00000587995	LRP1	Q07954	4544 aa	Known RBP	4.82	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	KRTAP3-2	Q9BYR7	98 aa		4.79	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	SACS	Q9NZJ4	4579 aa		4.78	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	MT1HL1	P0DM35	61 aa		4.78	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	LUZP6	Q538Z0	58 aa		4.78	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	KRTAP12-1	P59990	96 aa		4.78	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	FAT3	Q8TDW7	4589 aa		4.78	□□□□□ -1.64
CACNA2D4-222	ENST00000587995	APOB	P04114	4563 aa	Known RBP	4.75	□□□□□ -1.65
CACNA2D4-222	ENST00000587995	KIAA1109	Q2LD37	5005 aa		4.75	□□□□□ -1.65
CACNA2D4-222	ENST00000587995	FAT2	Q9NYQ8	4349 aa		4.73	□□□□□ -1.65
CACNA2D4-222	ENST00000587995	RYR1	P21817	5038 aa		4.72	□□□□□ -1.65
CACNA2D4-222	ENST00000587995	KRTAP4-5	Q9BYR2	181 aa		4.71	□□□□□ -1.66
CACNA2D4-222	ENST00000587995	PKD1	P98161	4303 aa		4.65	□□□□□ -1.66
CACNA2D4-222	ENST00000587995	KRTAP15-1	Q3LI76	137 aa		4.65	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	RYR3	Q15413	4870 aa		4.64	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	PLAC4	Q8WY50	150 aa		4.63	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	KMT2C	Q8NEZ4	4911 aa	Known RBP	4.62	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	KRTAP17-1	Q9BYP8	105 aa		4.6	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	LRP2	P98164	4655 aa		4.59	□□□□□ -1.67
CACNA2D4-222	ENST00000587995	TNP1	P09430	55 aa		4.58	□□□□□ -1.68
CACNA2D4-222	ENST00000587995	LOR	P23490	312 aa	Predicted RBP	4.57	□□□□□ -1.68
CACNA2D4-222	ENST00000587995	RYR2	Q92736	4967 aa		4.54	□□□□□ -1.68
CACNA2D4-222	ENST00000587995	HSPG2	P98160	4391 aa		4.53	□□□□□ -1.68
CACNA2D4-222	ENST00000587995	PP632	Q6XCG6	107 aa		4.47	□□□□□ -1.69
CACNA2D4-222	ENST00000587995	KRTAP4-1	Q9BYQ7	146 aa		4.46	□□□□□ -1.69
CACNA2D4-222	ENST00000587995	KRTAP10-10	P60014	251 aa		4.46	□□□□□ -1.7
CACNA2D4-222	ENST00000587995	LPA	P08519	4548 aa		4.43	□□□□□ -1.7
CACNA2D4-222	ENST00000587995	PKHD1L1	Q86WI1	4243 aa		4.41	□□□□□ -1.7
CACNA2D4-222	ENST00000587995	TNXB	P22105	4242 aa		4.33	□□□□□ -1.72
CACNA2D4-222	ENST00000587995	EPPK1	P58107	5090 aa	Known RBP	4.33	□□□□□ -1.72
CACNA2D4-222	ENST00000587995	HERC2	O95714	4834 aa		4.32	□□□□□ -1.72
CACNA2D4-222	ENST00000587995	BIRC6	Q9NR09	4857 aa		4.32	□□□□□ -1.72
CACNA2D4-222	ENST00000587995	ABCA13	Q86UQ4	5058 aa		4.25	□□□□□ -1.73
CACNA2D4-222	ENST00000587995	MUC2	Q02817	5179 aa		4.21	□□□□□ -1.73
CACNA2D4-222	ENST00000587995	LCE3A	Q5TA76	89 aa		4.12	□□□□□ -1.75
CACNA2D4-222	ENST00000587995	PRO2289	Q9P1D8	64 aa		4.08	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	HERC1	Q15751	4861 aa		4.05	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	FAT4	Q6V0I7	4981 aa		4.05	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	PCLO	Q9Y6V0	5065 aa		4.04	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	MT1H	P80294	61 aa		4.04	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	RNF213	Q63HN8	5207 aa		4.03	□□□□□ -1.76
CACNA2D4-222	ENST00000587995	MT1F	P04733	61 aa		4.01	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	KRTAP10-12	P60413	245 aa		4.01	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	KRTAP19-2	Q3LHN2	52 aa		4.01	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	MT2A	P02795	61 aa		4.01	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	MUC17	Q685J3	4493 aa		4	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	SPRR2G	Q9BYE4	73 aa		4	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	KRTAP19-1	Q8IUB9	90 aa		3.99	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	KRTAP12-3	P60328	96 aa		3.98	□□□□□ -1.77
CACNA2D4-222	ENST00000587995	KRTAP23-1	A1A580	65 aa		3.96	□□□□□ -1.78
CACNA2D4-222	ENST00000587995	FLG	P20930	4061 aa	Predicted RBP	3.95	□□□□□ -1.78
CACNA2D4-222	ENST00000587995	LCE2C	Q5TA81	110 aa		3.93	□□□□□ -1.78
CACNA2D4-222	ENST00000587995	UBR4	Q5T4S7	5183 aa		3.89	□□□□□ -1.79
CACNA2D4-222	ENST00000587995	KRTAP9-8	Q9BYQ0	159 aa		3.82	□□□□□ -1.8
CACNA2D4-222	ENST00000587995	HMCN2	Q8NDA2	5059 aa		3.8	□□□□□ -1.8
CACNA2D4-222	ENST00000587995	KRTAP10-7	P60409	375 aa	Predicted RBP	3.8	□□□□□ -1.8
CACNA2D4-222	ENST00000587995	KRTAP8-1	Q8IUC2	63 aa		3.79	□□□□□ -1.8
CACNA2D4-222	ENST00000587995	MT1B	P07438	61 aa		3.78	□□□□□ -1.8
CACNA2D4-222	ENST00000587995	MT1X	P80297	61 aa		3.77	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	KRTAP10-5	P60370	271 aa		3.76	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	KRTAP19-8	Q3LI54	63 aa		3.75	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	FSIP2	Q5CZC0	6907 aa		3.74	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	INE1	O15225	51 aa		3.73	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	SPRR5	A0A1B0GTR4	108 aa		3.73	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	KRTAP19-5	Q3LI72	72 aa		3.72	□□□□□ -1.81
CACNA2D4-222	ENST00000587995	CRCT1	Q9UGL9	99 aa		3.71	□□□□□ -1.82
CACNA2D4-222	ENST00000587995	KRTAP9-3	Q9BYQ3	159 aa		3.66	□□□□□ -1.82
CACNA2D4-222	ENST00000587995	KRTAP4-8	A0A0G2JLE6	195 aa		3.66	□□□□□ -1.82
CACNA2D4-222	ENST00000587995	KRTAP4-8	Q9BYQ9	185 aa		3.66	□□□□□ -1.82
CACNA2D4-222	ENST00000587995	USH2A	O75445	5202 aa		3.61	□□□□□ -1.83
CACNA2D4-222	ENST00000587995	LCE3C	Q5T5A8	94 aa		3.6	□□□□□ -1.83
CACNA2D4-222	ENST00000587995	LCE2B	O14633	110 aa		3.58	□□□□□ -1.84
CACNA2D4-222	ENST00000587995	KMT2D	O14686	5537 aa		3.55	□□□□□ -1.84
CACNA2D4-222	ENST00000587995	KRTAP4-7	Q9BYR0	210 aa		3.52	□□□□□ -1.85
CACNA2D4-222	ENST00000587995	OBSCN	Q5VST9	7968 aa		3.46	□□□□□ -1.86
CACNA2D4-222	ENST00000587995	SYNE1	Q8NF91	8797 aa	Known RBP	3.44	□□□□□ -1.86
CACNA2D4-222	ENST00000587995	DST	Q03001	7570 aa	Known RBP	3.41	□□□□□ -1.86
CACNA2D4-222	ENST00000587995	LCE2A	Q5TA79	106 aa	Predicted RBP	3.4	□□□□□ -1.86
CACNA2D4-222	ENST00000587995	KRTAP9-2	Q9BYQ4	174 aa		3.38	□□□□□ -1.87
CACNA2D4-222	ENST00000587995	LCE2D	Q5TA82	110 aa	Predicted RBP	3.35	□□□□□ -1.87
CACNA2D4-222	ENST00000587995	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	3.35	□□□□□ -1.87
CACNA2D4-222	ENST00000587995	MT1G	P13640	62 aa		3.34	□□□□□ -1.87
CACNA2D4-222	ENST00000587995	SPRR2F	Q96RM1	72 aa		3.34	□□□□□ -1.87
CACNA2D4-222	ENST00000587995	KRTAP19-7	Q3SYF9	63 aa		3.31	□□□□□ -1.88

Retrieved 100 of 20,778 RNA–protein pairs in 40 ms