RNA–Protein interactions for RNA: ENST00000587604.1

DNMT1-213, Transcript of DNA methyltransferase 1, humanhuman

TSL 2

Gene DNMT1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-213ENST00000587604 CYP4F30PQ9H0H9 118 aa5.99□□□□□ -1.45
DNMT1-213ENST00000587604 SPRR2EP22531 72 aa5.98□□□□□ -1.45
DNMT1-213ENST00000587604 SPRR2BP35325 72 aa5.98□□□□□ -1.45
DNMT1-213ENST00000587604 SPRR2AP35326 72 aa5.98□□□□□ -1.45
DNMT1-213ENST00000587604 SPCS1Q9Y6A9 102 aa5.97□□□□□ -1.45
DNMT1-213ENST00000587604 PRO2289Q9P1D8 64 aa5.95□□□□□ -1.46
DNMT1-213ENST00000587604 H0YAA0 97 aa5.94□□□□□ -1.46
DNMT1-213ENST00000587604 NDUFC1O43677 76 aa5.91□□□□□ -1.46
DNMT1-213ENST00000587604 LOC101927531A0A1B0GV80 90 aa5.9□□□□□ -1.46
DNMT1-213ENST00000587604 MT1XP80297 61 aa5.9□□□□□ -1.46
DNMT1-213ENST00000587604 KRTAP2-2Q9BYT5 123 aa5.9□□□□□ -1.46
DNMT1-213ENST00000587604 KRTAP2-1Q9BYU5 128 aa5.9□□□□□ -1.46
DNMT1-213ENST00000587604 PRO0461Q9UI25 63 aa5.9□□□□□ -1.46
DNMT1-213ENST00000587604 KRTAP8-1Q8IUC2 63 aa5.89□□□□□ -1.47
DNMT1-213ENST00000587604 TRAV22A0A0B4J277 110 aa5.88□□□□□ -1.47
DNMT1-213ENST00000587604 A8MUN3 132 aa5.88□□□□□ -1.47
DNMT1-213ENST00000587604 LCE1AQ5T7P2 110 aa5.88□□□□□ -1.47
DNMT1-213ENST00000587604 ADM2Q7Z4H4 148 aa5.86□□□□□ -1.47
DNMT1-213ENST00000587604 PLAC4Q8WY50 150 aa5.85□□□□□ -1.47
DNMT1-213ENST00000587604 K7EP34 96 aa5.84□□□□□ -1.47
DNMT1-213ENST00000587604 KRTAP12-2P59991 146 aa5.83□□□□□ -1.48
DNMT1-213ENST00000587604 A0A1B0GV90 55 aa5.8□□□□□ -1.48
DNMT1-213ENST00000587604 ACYP1P07311 99 aa5.79□□□□□ -1.48
DNMT1-213ENST00000587604 SPRR2DP22532 72 aa5.79□□□□□ -1.48
DNMT1-213ENST00000587604 ATOX1O00244 68 aa5.76□□□□□ -1.49
DNMT1-213ENST00000587604 COL5A1-AS1Q5SY13 56 aa5.76□□□□□ -1.49
DNMT1-213ENST00000587604 KRTAP4-8A0A0G2JLE6 195 aa5.75□□□□□ -1.49
DNMT1-213ENST00000587604 UQCRQO14949 82 aa5.75□□□□□ -1.49
DNMT1-213ENST00000587604 KRTAP4-8Q9BYQ9 185 aa5.75□□□□□ -1.49
DNMT1-213ENST00000587604 H0Y9P7 68 aa5.74□□□□□ -1.49
DNMT1-213ENST00000587604 R4GN34 69 aa5.74□□□□□ -1.49
DNMT1-213ENST00000587604 F8W1H4 67 aa5.71□□□□□ -1.5
DNMT1-213ENST00000587604 ETDBQ3ZM63 59 aa5.71□□□□□ -1.5
DNMT1-213ENST00000587604 GTF2H5Q6ZYL4 71 aa5.69□□□□□ -1.5
DNMT1-213ENST00000587604 P0C880 135 aa5.68□□□□□ -1.5
DNMT1-213ENST00000587604 C20orf197Q8N268 126 aa5.68□□□□□ -1.5
DNMT1-213ENST00000587604 M0QZ58 72 aa5.67□□□□□ -1.5
DNMT1-213ENST00000587604 HIST1H4AP62805 103 aaKnown RBP5.66□□□□□ -1.5
DNMT1-213ENST00000587604 LCE3BQ5TA77 95 aa5.66□□□□□ -1.5
DNMT1-213ENST00000587604 ATP5EP2Q5VTU8 51 aa5.64□□□□□ -1.51
DNMT1-213ENST00000587604 LINC00208Q96KT6 92 aa5.63□□□□□ -1.51
DNMT1-213ENST00000587604 KRTAP10-7P60409 375 aaPredicted RBP5.62□□□□□ -1.51
DNMT1-213ENST00000587604 KRTAP10-12P60413 245 aa5.61□□□□□ -1.51
DNMT1-213ENST00000587604 LINC01554Q52M75 96 aa5.6□□□□□ -1.51
DNMT1-213ENST00000587604 KRTAP3-2Q9BYR7 98 aa5.59□□□□□ -1.51
DNMT1-213ENST00000587604 FAM240AA0A1B0GVK7 77 aa5.57□□□□□ -1.52
DNMT1-213ENST00000587604 MP68P56378 58 aa5.55□□□□□ -1.52
DNMT1-213ENST00000587604 OCR1Q9BZK8 76 aa5.51□□□□□ -1.53
DNMT1-213ENST00000587604 DMAC1Q96GE9 116 aa5.5□□□□□ -1.53
DNMT1-213ENST00000587604 PCP4P48539 62 aa5.49□□□□□ -1.53
DNMT1-213ENST00000587604 LINC00643Q86TS7 51 aa5.47□□□□□ -1.53
DNMT1-213ENST00000587604 GPR98Q8WXG9 6306 aa5.47□□□□□ -1.53
DNMT1-213ENST00000587604 K7ERU9 68 aa5.46□□□□□ -1.54
DNMT1-213ENST00000587604 DSTQ03001 7570 aaKnown RBP5.45□□□□□ -1.54
DNMT1-213ENST00000587604 H3BPC8 53 aa5.44□□□□□ -1.54
DNMT1-213ENST00000587604 MT-ATP8P03928 68 aa5.43□□□□□ -1.54
DNMT1-213ENST00000587604 TRAV7A0A075B6U4 112 aa5.39□□□□□ -1.55
DNMT1-213ENST00000587604 J3QR89 54 aa5.35□□□□□ -1.55
DNMT1-213ENST00000587604 LCE5AQ5TCM9 118 aa5.34□□□□□ -1.55
DNMT1-213ENST00000587604 KRTAP4-9Q9BYQ8 210 aa5.34□□□□□ -1.55
DNMT1-213ENST00000587604 SCGB1A1P11684 91 aa5.33□□□□□ -1.56
DNMT1-213ENST00000587604 ACYP2P14621 99 aa5.32□□□□□ -1.56
DNMT1-213ENST00000587604 SPTSSBQ8NFR3 76 aa5.32□□□□□ -1.56
DNMT1-213ENST00000587604 KRTAP19-7Q3SYF9 63 aa5.29□□□□□ -1.56
DNMT1-213ENST00000587604 KRTAP19-3Q7Z4W3 81 aa5.27□□□□□ -1.57
DNMT1-213ENST00000587604 MT1EP04732 61 aa5.25□□□□□ -1.57
DNMT1-213ENST00000587604 CAMK2N1Q7Z7J9 78 aa5.23□□□□□ -1.57
DNMT1-213ENST00000587604 CHKB-CPT1BH3BT56 60 aa5.2□□□□□ -1.58
DNMT1-213ENST00000587604 KRTAP13-4Q3LI77 160 aa5.18□□□□□ -1.58
DNMT1-213ENST00000587604 LCE1DQ5T752 114 aa5.18□□□□□ -1.58
DNMT1-213ENST00000587604 CYSTM1Q9H1C7 97 aa5.17□□□□□ -1.58
DNMT1-213ENST00000587604 MT1GP13640 62 aa5.13□□□□□ -1.59
DNMT1-213ENST00000587604 LCE4AQ5TA78 99 aa5.11□□□□□ -1.59
DNMT1-213ENST00000587604 HMCN1Q96RW7 5635 aa5.09□□□□□ -1.59
DNMT1-213ENST00000587604 MT4P47944 62 aa5.09□□□□□ -1.59
DNMT1-213ENST00000587604 PP632Q6XCG6 107 aa5.09□□□□□ -1.59
DNMT1-213ENST00000587604 A0A0D9SG42 100 aa5.07□□□□□ -1.6
DNMT1-213ENST00000587604 KRTAP19-5Q3LI72 72 aa5.07□□□□□ -1.6
DNMT1-213ENST00000587604 ANAPC13Q9BS18 74 aa5.07□□□□□ -1.6
DNMT1-213ENST00000587604 SMIM20Q8N5G0 67 aa5.06□□□□□ -1.6
DNMT1-213ENST00000587604 MT1MQ8N339 61 aa5.02□□□□□ -1.61
DNMT1-213ENST00000587604 SPANXA2-OT1Q8N9U9 137 aa4.99□□□□□ -1.61
DNMT1-213ENST00000587604 SNURFQ9Y675 71 aa4.99□□□□□ -1.61
DNMT1-213ENST00000587604 KRTAP5-10Q6L8G5 202 aa4.97□□□□□ -1.61
DNMT1-213ENST00000587604 KRTAP5-4Q6L8H1 288 aa4.97□□□□□ -1.61
DNMT1-213ENST00000587604 SVIPQ8NHG7 77 aa4.97□□□□□ -1.61
DNMT1-213ENST00000587604 MT1LQ93083 61 aa4.97□□□□□ -1.61
DNMT1-213ENST00000587604 AHNAK2Q8IVF2 5795 aa4.97□□□□□ -1.61
DNMT1-213ENST00000587604 SPINT4Q6UDR6 99 aa4.94□□□□□ -1.62
DNMT1-213ENST00000587604 CCDC179H3BU77 68 aa4.93□□□□□ -1.62
DNMT1-213ENST00000587604 SPATA8Q6RVD6 105 aa4.92□□□□□ -1.62
DNMT1-213ENST00000587604 KRTAP4-6Q9BYQ5 205 aa4.92□□□□□ -1.62
DNMT1-213ENST00000587604 SEC61GP60059 68 aa4.91□□□□□ -1.62
DNMT1-213ENST00000587604 KRTAP4-3Q9BYR4 195 aa4.91□□□□□ -1.62
DNMT1-213ENST00000587604 SERP1Q9Y6X1 66 aa4.91□□□□□ -1.62
DNMT1-213ENST00000587604 KRTAP12-1P59990 96 aa4.88□□□□□ -1.63
DNMT1-213ENST00000587604 A0A1B0GU33 70 aa4.86□□□□□ -1.63
DNMT1-213ENST00000587604 COX7CP15954 63 aa4.85□□□□□ -1.63
DNMT1-213ENST00000587604 COA5Q86WW8 74 aa4.85□□□□□ -1.63
DNMT1-213ENST00000587604 C10orf95Q9H7T3 257 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms