RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 C10orf95Q9H7T3 257 aa6.07□□□□□ -1.44
ERBB2-218ENST00000584450 DYNC1H1Q14204 4646 aaKnown RBP6.02□□□□□ -1.45
ERBB2-218ENST00000584450 MYCBP2O75592 4640 aa6.01□□□□□ -1.45
ERBB2-218ENST00000584450 VPS13BQ7Z7G8 4022 aa6.01□□□□□ -1.45
ERBB2-218ENST00000584450 HYDINQ4G0P3 5121 aa5.99□□□□□ -1.45
ERBB2-218ENST00000584450 HECTD4Q9Y4D8 3996 aa5.99□□□□□ -1.45
ERBB2-218ENST00000584450 DYNC2H1Q8NCM8 4307 aaKnown RBP5.97□□□□□ -1.45
ERBB2-218ENST00000584450 TPRXLQ17RH7 258 aa5.97□□□□□ -1.45
ERBB2-218ENST00000584450 A0A0A0MQY5 61 aa5.93□□□□□ -1.46
ERBB2-218ENST00000584450 KRTAP13-4Q3LI77 160 aa5.93□□□□□ -1.46
ERBB2-218ENST00000584450 MT1HL1P0DM35 61 aa5.93□□□□□ -1.46
ERBB2-218ENST00000584450 KRTAP4-5Q9BYR2 181 aa5.92□□□□□ -1.46
ERBB2-218ENST00000584450 PKHD1P08F94 4074 aa5.92□□□□□ -1.46
ERBB2-218ENST00000584450 KIAA1109Q2LD37 5005 aa5.91□□□□□ -1.46
ERBB2-218ENST00000584450 LRP1Q07954 4544 aaKnown RBP5.89□□□□□ -1.47
ERBB2-218ENST00000584450 KRTAP10-6P60371 365 aaPredicted RBP5.89□□□□□ -1.47
ERBB2-218ENST00000584450 FAT3Q8TDW7 4589 aa5.87□□□□□ -1.47
ERBB2-218ENST00000584450 KRTAP12-2P59991 146 aa5.87□□□□□ -1.47
ERBB2-218ENST00000584450 KRTAP3-3Q9BYR6 98 aa5.85□□□□□ -1.47
ERBB2-218ENST00000584450 RYR1P21817 5038 aa5.85□□□□□ -1.47
ERBB2-218ENST00000584450 SACSQ9NZJ4 4579 aa5.85□□□□□ -1.47
ERBB2-218ENST00000584450 ALMS1Q8TCU4 4167 aa5.83□□□□□ -1.48
ERBB2-218ENST00000584450 APOBP04114 4563 aaKnown RBP5.81□□□□□ -1.48
ERBB2-218ENST00000584450 KRTAP3-2Q9BYR7 98 aa5.78□□□□□ -1.48
ERBB2-218ENST00000584450 FAT2Q9NYQ8 4349 aa5.77□□□□□ -1.49
ERBB2-218ENST00000584450 NDUFAF8A1L188 74 aa5.76□□□□□ -1.49
ERBB2-218ENST00000584450 KRTAP12-1P59990 96 aa5.76□□□□□ -1.49
ERBB2-218ENST00000584450 LUZP6Q538Z0 58 aa5.75□□□□□ -1.49
ERBB2-218ENST00000584450 RYR3Q15413 4870 aa5.75□□□□□ -1.49
ERBB2-218ENST00000584450 KMT2CQ8NEZ4 4911 aaKnown RBP5.74□□□□□ -1.49
ERBB2-218ENST00000584450 KRTAP17-1Q9BYP8 105 aa5.72□□□□□ -1.49
ERBB2-218ENST00000584450 PLAC4Q8WY50 150 aa5.69□□□□□ -1.5
ERBB2-218ENST00000584450 PKD1P98161 4303 aa5.62□□□□□ -1.51
ERBB2-218ENST00000584450 RYR2Q92736 4967 aa5.61□□□□□ -1.51
ERBB2-218ENST00000584450 LRP2P98164 4655 aa5.6□□□□□ -1.51
ERBB2-218ENST00000584450 TNP1P09430 55 aa5.58□□□□□ -1.52
ERBB2-218ENST00000584450 LORP23490 312 aaPredicted RBP5.57□□□□□ -1.52
ERBB2-218ENST00000584450 KRTAP10-10P60014 251 aa5.56□□□□□ -1.52
ERBB2-218ENST00000584450 KRTAP4-1Q9BYQ7 146 aa5.51□□□□□ -1.53
ERBB2-218ENST00000584450 HSPG2P98160 4391 aa5.45□□□□□ -1.54
ERBB2-218ENST00000584450 LPAP08519 4548 aa5.42□□□□□ -1.54
ERBB2-218ENST00000584450 HERC2O95714 4834 aa5.38□□□□□ -1.55
ERBB2-218ENST00000584450 PP632Q6XCG6 107 aa5.38□□□□□ -1.55
ERBB2-218ENST00000584450 EPPK1P58107 5090 aaKnown RBP5.36□□□□□ -1.55
ERBB2-218ENST00000584450 PKHD1L1Q86WI1 4243 aa5.32□□□□□ -1.56
ERBB2-218ENST00000584450 KRTAP15-1Q3LI76 137 aa5.24□□□□□ -1.57
ERBB2-218ENST00000584450 ABCA13Q86UQ4 5058 aa5.23□□□□□ -1.57
ERBB2-218ENST00000584450 TNXBP22105 4242 aa5.22□□□□□ -1.57
ERBB2-218ENST00000584450 MUC2Q02817 5179 aa5.2□□□□□ -1.58
ERBB2-218ENST00000584450 PRO2289Q9P1D8 64 aa5.06□□□□□ -1.6
ERBB2-218ENST00000584450 HERC1Q15751 4861 aa5.05□□□□□ -1.6
ERBB2-218ENST00000584450 RNF213Q63HN8 5207 aa5.04□□□□□ -1.6
ERBB2-218ENST00000584450 MT1HP80294 61 aa5.02□□□□□ -1.61
ERBB2-218ENST00000584450 LCE3AQ5TA76 89 aa5□□□□□ -1.61
ERBB2-218ENST00000584450 PCLOQ9Y6V0 5065 aa5□□□□□ -1.61
ERBB2-218ENST00000584450 FAT4Q6V0I7 4981 aa5□□□□□ -1.61
ERBB2-218ENST00000584450 BIRC6Q9NR09 4857 aa4.98□□□□□ -1.61
ERBB2-218ENST00000584450 MT2AP02795 61 aa4.96□□□□□ -1.61
ERBB2-218ENST00000584450 MT1FP04733 61 aa4.96□□□□□ -1.61
ERBB2-218ENST00000584450 KRTAP10-12P60413 245 aa4.92□□□□□ -1.62
ERBB2-218ENST00000584450 KRTAP19-2Q3LHN2 52 aa4.89□□□□□ -1.63
ERBB2-218ENST00000584450 KRTAP19-1Q8IUB9 90 aa4.88□□□□□ -1.63
ERBB2-218ENST00000584450 SPRR2GQ9BYE4 73 aa4.88□□□□□ -1.63
ERBB2-218ENST00000584450 UBR4Q5T4S7 5183 aa4.87□□□□□ -1.63
ERBB2-218ENST00000584450 LCE2CQ5TA81 110 aa4.86□□□□□ -1.63
ERBB2-218ENST00000584450 KRTAP12-3P60328 96 aa4.85□□□□□ -1.63
ERBB2-218ENST00000584450 MUC17Q685J3 4493 aa4.83□□□□□ -1.64
ERBB2-218ENST00000584450 FSIP2Q5CZC0 6907 aa4.78□□□□□ -1.64
ERBB2-218ENST00000584450 FLGP20930 4061 aaPredicted RBP4.76□□□□□ -1.65
ERBB2-218ENST00000584450 KRTAP23-1A1A580 65 aa4.73□□□□□ -1.65
ERBB2-218ENST00000584450 KRTAP9-8Q9BYQ0 159 aa4.73□□□□□ -1.65
ERBB2-218ENST00000584450 HMCN2Q8NDA2 5059 aa4.68□□□□□ -1.66
ERBB2-218ENST00000584450 KRTAP10-7P60409 375 aaPredicted RBP4.66□□□□□ -1.66
ERBB2-218ENST00000584450 MT1BP07438 61 aa4.64□□□□□ -1.67
ERBB2-218ENST00000584450 MT1XP80297 61 aa4.62□□□□□ -1.67
ERBB2-218ENST00000584450 CRCT1Q9UGL9 99 aa4.62□□□□□ -1.67
ERBB2-218ENST00000584450 KRTAP10-5P60370 271 aa4.6□□□□□ -1.67
ERBB2-218ENST00000584450 KRTAP19-8Q3LI54 63 aa4.6□□□□□ -1.67
ERBB2-218ENST00000584450 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
ERBB2-218ENST00000584450 KRTAP19-5Q3LI72 72 aa4.56□□□□□ -1.68
ERBB2-218ENST00000584450 KRTAP9-3Q9BYQ3 159 aa4.53□□□□□ -1.68
ERBB2-218ENST00000584450 KRTAP4-8A0A0G2JLE6 195 aa4.52□□□□□ -1.69
ERBB2-218ENST00000584450 KRTAP4-8Q9BYQ9 185 aa4.52□□□□□ -1.69
ERBB2-218ENST00000584450 USH2AO75445 5202 aa4.48□□□□□ -1.69
ERBB2-218ENST00000584450 OBSCNQ5VST9 7968 aa4.47□□□□□ -1.69
ERBB2-218ENST00000584450 LCE2BO14633 110 aa4.45□□□□□ -1.7
ERBB2-218ENST00000584450 LCE3CQ5T5A8 94 aa4.37□□□□□ -1.71
ERBB2-218ENST00000584450 SPRR5A0A1B0GTR4 108 aa4.36□□□□□ -1.71
ERBB2-218ENST00000584450 KMT2DO14686 5537 aa4.34□□□□□ -1.71
ERBB2-218ENST00000584450 INE1O15225 51 aa4.32□□□□□ -1.72
ERBB2-218ENST00000584450 KRTAP4-7Q9BYR0 210 aa4.32□□□□□ -1.72
ERBB2-218ENST00000584450 SYNE1Q8NF91 8797 aaKnown RBP4.25□□□□□ -1.73
ERBB2-218ENST00000584450 DSTQ03001 7570 aaKnown RBP4.23□□□□□ -1.73
ERBB2-218ENST00000584450 SPRR2FQ96RM1 72 aa4.2□□□□□ -1.74
ERBB2-218ENST00000584450 LCE2AQ5TA79 106 aaPredicted RBP4.17□□□□□ -1.74
ERBB2-218ENST00000584450 FCGBPQ9Y6R7 5405 aaPredicted RBP4.13□□□□□ -1.75
ERBB2-218ENST00000584450 MT1GP13640 62 aa4.11□□□□□ -1.75
ERBB2-218ENST00000584450 MT1LQ93083 61 aa4.05□□□□□ -1.76
ERBB2-218ENST00000584450 KRTAP4-3Q9BYR4 195 aa4.05□□□□□ -1.76
ERBB2-218ENST00000584450 KRTAP19-7Q3SYF9 63 aa4.04□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms