RNA–Protein interactions for RNA: ENST00000584400.5

SMARCD2-210, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 2, humanhuman

TSL 3

Gene SMARCD2, Length 1,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD2-210ENST00000584400 KRTAP19-6Q3LI70 58 aa12.43□□□□□ -0.42
SMARCD2-210ENST00000584400 KRTAP9-1A8MXZ3 250 aaPredicted RBP12.41□□□□□ -0.42
SMARCD2-210ENST00000584400 H3BPC8 53 aa12.39□□□□□ -0.43
SMARCD2-210ENST00000584400 NDUFC1O43677 76 aa12.38□□□□□ -0.43
SMARCD2-210ENST00000584400 KLKP1Q107X0 134 aa12.36□□□□□ -0.43
SMARCD2-210ENST00000584400 IMUPQ9GZP8 106 aa12.33□□□□□ -0.44
SMARCD2-210ENST00000584400 K7ERU9 68 aa12.32□□□□□ -0.44
SMARCD2-210ENST00000584400 FCGBPQ9Y6R7 5405 aaPredicted RBP12.31□□□□□ -0.44
SMARCD2-210ENST00000584400 SPRR2GQ9BYE4 73 aa12.27□□□□□ -0.45
SMARCD2-210ENST00000584400 CRIPTQ9P021 101 aa12.25□□□□□ -0.45
SMARCD2-210ENST00000584400 KRTAP9-7A8MTY7 169 aa12.22□□□□□ -0.45
SMARCD2-210ENST00000584400 H0YAA0 97 aa12.21□□□□□ -0.45
SMARCD2-210ENST00000584400 Q5VV11 94 aa12.2□□□□□ -0.46
SMARCD2-210ENST00000584400 MT-ATP8P03928 68 aa12.16□□□□□ -0.46
SMARCD2-210ENST00000584400 KRTAP19-8Q3LI54 63 aa12.15□□□□□ -0.46
SMARCD2-210ENST00000584400 SMIM20Q8N5G0 67 aa12.15□□□□□ -0.46
SMARCD2-210ENST00000584400 DMAC1Q96GE9 116 aa12.09□□□□□ -0.47
SMARCD2-210ENST00000584400 MT1BP07438 61 aa12.08□□□□□ -0.48
SMARCD2-210ENST00000584400 TRAV7A0A075B6U4 112 aa12.05□□□□□ -0.48
SMARCD2-210ENST00000584400 ADM2Q7Z4H4 148 aa12.04□□□□□ -0.48
SMARCD2-210ENST00000584400 A6NN06 94 aa11.99□□□□□ -0.49
SMARCD2-210ENST00000584400 MACF1Q9UPN3 7388 aaKnown RBP11.93□□□□□ -0.5
SMARCD2-210ENST00000584400 C20orf197Q8N268 126 aa11.91□□□□□ -0.5
SMARCD2-210ENST00000584400 ACYP2P14621 99 aa11.9□□□□□ -0.5
SMARCD2-210ENST00000584400 KRTAP10-5P60370 271 aa11.82□□□□□ -0.52
SMARCD2-210ENST00000584400 SPTSSBQ8NFR3 76 aa11.78□□□□□ -0.52
SMARCD2-210ENST00000584400 R4GN34 69 aa11.78□□□□□ -0.52
SMARCD2-210ENST00000584400 SYNE2Q8WXH0 6885 aaKnown RBP11.76□□□□□ -0.53
SMARCD2-210ENST00000584400 SNURFQ9Y675 71 aa11.75□□□□□ -0.53
SMARCD2-210ENST00000584400 P0C880 135 aa11.73□□□□□ -0.53
SMARCD2-210ENST00000584400 KRTAP6-3Q3LI67 103 aa11.71□□□□□ -0.53
SMARCD2-210ENST00000584400 SERP2Q8N6R1 65 aa11.71□□□□□ -0.53
SMARCD2-210ENST00000584400 CHKB-CPT1BH3BT56 60 aa11.69□□□□□ -0.54
SMARCD2-210ENST00000584400 M0QZ58 72 aa11.65□□□□□ -0.54
SMARCD2-210ENST00000584400 SPANXA2-OT1Q8N9U9 137 aa11.65□□□□□ -0.54
SMARCD2-210ENST00000584400 PLAC4Q8WY50 150 aa11.64□□□□□ -0.55
SMARCD2-210ENST00000584400 KRTAP3-2Q9BYR7 98 aa11.64□□□□□ -0.55
SMARCD2-210ENST00000584400 PRO2289Q9P1D8 64 aa11.58□□□□□ -0.56
SMARCD2-210ENST00000584400 LINC01554Q52M75 96 aa11.47□□□□□ -0.57
SMARCD2-210ENST00000584400 COX7CP15954 63 aa11.39□□□□□ -0.59
SMARCD2-210ENST00000584400 MT1XP80297 61 aa11.38□□□□□ -0.59
SMARCD2-210ENST00000584400 COA5Q86WW8 74 aa11.26□□□□□ -0.61
SMARCD2-210ENST00000584400 KRTAP5-9P26371 169 aa11.23□□□□□ -0.61
SMARCD2-210ENST00000584400 H7BZZ5 65 aa11.15□□□□□ -0.62
SMARCD2-210ENST00000584400 KRTAP12-2P59991 146 aa11.14□□□□□ -0.63
SMARCD2-210ENST00000584400 SEC61GP60059 68 aa11.14□□□□□ -0.63
SMARCD2-210ENST00000584400 SERP1Q9Y6X1 66 aa11.09□□□□□ -0.63
SMARCD2-210ENST00000584400 ANAPC13Q9BS18 74 aa11.08□□□□□ -0.64
SMARCD2-210ENST00000584400 CYSTM1Q9H1C7 97 aa11.05□□□□□ -0.64
SMARCD2-210ENST00000584400 NEBP20929 6669 aa11.03□□□□□ -0.64
SMARCD2-210ENST00000584400 KRTAP8-1Q8IUC2 63 aa11.01□□□□□ -0.65
SMARCD2-210ENST00000584400 MUC12Q9UKN1 5478 aa11.01□□□□□ -0.65
SMARCD2-210ENST00000584400 KRTAP13-4Q3LI77 160 aa10.99□□□□□ -0.65
SMARCD2-210ENST00000584400 SPRR2FQ96RM1 72 aa10.96□□□□□ -0.65
SMARCD2-210ENST00000584400 KMT2DO14686 5537 aa10.91□□□□□ -0.66
SMARCD2-210ENST00000584400 CAMK2N1Q7Z7J9 78 aa10.87□□□□□ -0.67
SMARCD2-210ENST00000584400 KRTAP10-7P60409 375 aaPredicted RBP10.85□□□□□ -0.67
SMARCD2-210ENST00000584400 KRTAP10-12P60413 245 aa10.85□□□□□ -0.67
SMARCD2-210ENST00000584400 A0A1B0GU33 70 aa10.84□□□□□ -0.67
SMARCD2-210ENST00000584400 KRTAP4-8A0A0G2JLE6 195 aa10.81□□□□□ -0.68
SMARCD2-210ENST00000584400 KRTAP4-8Q9BYQ9 185 aa10.81□□□□□ -0.68
SMARCD2-210ENST00000584400 CCDC179H3BU77 68 aa10.78□□□□□ -0.68
SMARCD2-210ENST00000584400 A0A0D9SG42 100 aa10.76□□□□□ -0.69
SMARCD2-210ENST00000584400 KRTAP20-1Q3LI63 56 aa10.76□□□□□ -0.69
SMARCD2-210ENST00000584400 A0A1B0GU69 56 aa10.75□□□□□ -0.69
SMARCD2-210ENST00000584400 SPRR2EP22531 72 aa10.75□□□□□ -0.69
SMARCD2-210ENST00000584400 SPRR2BP35325 72 aa10.75□□□□□ -0.69
SMARCD2-210ENST00000584400 SPRR2AP35326 72 aa10.75□□□□□ -0.69
SMARCD2-210ENST00000584400 ATP5EP56381 51 aaPredicted RBP10.74□□□□□ -0.69
SMARCD2-210ENST00000584400 SPATA8Q6RVD6 105 aa10.74□□□□□ -0.69
SMARCD2-210ENST00000584400 MDN1Q9NU22 5596 aa10.72□□□□□ -0.69
SMARCD2-210ENST00000584400 SPINT4Q6UDR6 99 aa10.63□□□□□ -0.71
SMARCD2-210ENST00000584400 LCE1AQ5T7P2 110 aa10.6□□□□□ -0.71
SMARCD2-210ENST00000584400 SMIM26A0A096LP01 95 aa10.58□□□□□ -0.72
SMARCD2-210ENST00000584400 KRTAP2-3P0C7H8 128 aa10.55□□□□□ -0.72
SMARCD2-210ENST00000584400 KRTAP2-4Q9BYR9 128 aa10.55□□□□□ -0.72
SMARCD2-210ENST00000584400 PRR15LQ9BU68 103 aa10.54□□□□□ -0.72
SMARCD2-210ENST00000584400 KRTAP12-1P59990 96 aa10.52□□□□□ -0.73
SMARCD2-210ENST00000584400 TMEM258P61165 79 aa10.48□□□□□ -0.73
SMARCD2-210ENST00000584400 SPRR2DP22532 72 aa10.4□□□□□ -0.74
SMARCD2-210ENST00000584400 LINC01558Q9Y6Z2 57 aa10.38□□□□□ -0.75
SMARCD2-210ENST00000584400 A8MU10 97 aa10.36□□□□□ -0.75
SMARCD2-210ENST00000584400 KRTAP2-2Q9BYT5 123 aa10.23□□□□□ -0.77
SMARCD2-210ENST00000584400 KRTAP2-1Q9BYU5 128 aa10.23□□□□□ -0.77
SMARCD2-210ENST00000584400 UQCR11O14957 56 aa10.16□□□□□ -0.78
SMARCD2-210ENST00000584400 KRTAP19-7Q3SYF9 63 aa10.16□□□□□ -0.78
SMARCD2-210ENST00000584400 LCE3BQ5TA77 95 aa10.1□□□□□ -0.79
SMARCD2-210ENST00000584400 MT1EP04732 61 aa10.09□□□□□ -0.79
SMARCD2-210ENST00000584400 TNP1P09430 55 aa10.08□□□□□ -0.8
SMARCD2-210ENST00000584400 C10orf95Q9H7T3 257 aa10.03□□□□□ -0.8
SMARCD2-210ENST00000584400 KRTAP19-3Q7Z4W3 81 aa10.01□□□□□ -0.81
SMARCD2-210ENST00000584400 KRTAP19-5Q3LI72 72 aa9.98□□□□□ -0.81
SMARCD2-210ENST00000584400 LCE5AQ5TCM9 118 aa9.98□□□□□ -0.81
SMARCD2-210ENST00000584400 V9GYY9 64 aa9.97□□□□□ -0.81
SMARCD2-210ENST00000584400 MIR22HGQ0VDD5 57 aa9.91□□□□□ -0.82
SMARCD2-210ENST00000584400 LCE3AQ5TA76 89 aa9.84□□□□□ -0.83
SMARCD2-210ENST00000584400 MT1GP13640 62 aa9.82□□□□□ -0.84
SMARCD2-210ENST00000584400 Q1T7F1 81 aa9.81□□□□□ -0.84
SMARCD2-210ENST00000584400 K7ERS5 55 aa9.8□□□□□ -0.84
SMARCD2-210ENST00000584400 PP632Q6XCG6 107 aa9.8□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms