RNA–Protein interactions for RNA: ENST00000583800.1

SMCHD1-210, Transcript of structural maintenance of chromosomes flexible hinge domain containing 1, humanhuman

TSL 5

Gene SMCHD1, Length 865 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCHD1-210ENST00000583800 S100A1P23297 94 aa3.6□□□□□ -1.83
SMCHD1-210ENST00000583800 H1FX-AS1Q4G0G2 97 aa3.6□□□□□ -1.83
SMCHD1-210ENST00000583800 C9JAW5 83 aa3.59□□□□□ -1.83
SMCHD1-210ENST00000583800 HSD52Q0P140 79 aa3.59□□□□□ -1.83
SMCHD1-210ENST00000583800 A6NN06 94 aa3.57□□□□□ -1.84
SMCHD1-210ENST00000583800 TSTD3H0UI37 97 aa3.57□□□□□ -1.84
SMCHD1-210ENST00000583800 KRTAP20-1Q3LI63 56 aa3.56□□□□□ -1.84
SMCHD1-210ENST00000583800 MMP24-AS1A0A0U1RRL7 71 aa3.55□□□□□ -1.84
SMCHD1-210ENST00000583800 A6NED7 52 aa3.55□□□□□ -1.84
SMCHD1-210ENST00000583800 BAALC-AS2P0C853 105 aa3.55□□□□□ -1.84
SMCHD1-210ENST00000583800 MRPL34Q9BQ48 92 aaKnown RBP3.55□□□□□ -1.84
SMCHD1-210ENST00000583800 MT1BP07438 61 aa3.54□□□□□ -1.84
SMCHD1-210ENST00000583800 PRR15Q8IV56 129 aa3.54□□□□□ -1.84
SMCHD1-210ENST00000583800 TMEM254Q8TBM7 123 aa3.54□□□□□ -1.84
SMCHD1-210ENST00000583800 LOC110117498A0A087WWA1 95 aa3.52□□□□□ -1.85
SMCHD1-210ENST00000583800 FAM236AA0A1B0GUQ0 79 aa3.52□□□□□ -1.85
SMCHD1-210ENST00000583800 FAM236BA0A1B0GV22 79 aa3.52□□□□□ -1.85
SMCHD1-210ENST00000583800 A0A1B0GW54 56 aa3.52□□□□□ -1.85
SMCHD1-210ENST00000583800 hDV103S1A0JD37 113 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 JMJD7-PLA2G4BH0Y9G9 81 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 K7EQZ3 153 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 SCGB1A1P11684 91 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 PYY3Q5JQD4 70 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 Q5VV11 94 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 C7orf65Q6ZTY9 151 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 C14orf132Q9NPU4 83 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 MDN1Q9NU22 5596 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 KMT2DO14686 5537 aa3.51□□□□□ -1.85
SMCHD1-210ENST00000583800 NREPQ16612 68 aa3.5□□□□□ -1.85
SMCHD1-210ENST00000583800 LCE1FQ5T754 118 aa3.5□□□□□ -1.85
SMCHD1-210ENST00000583800 KRTAP19-8Q3LI54 63 aa3.49□□□□□ -1.85
SMCHD1-210ENST00000583800 UQCR10Q9UDW1 63 aa3.49□□□□□ -1.85
SMCHD1-210ENST00000583800 PDE6GP18545 87 aa3.48□□□□□ -1.85
SMCHD1-210ENST00000583800 ATXN8Q156A1 80 aa3.48□□□□□ -1.85
SMCHD1-210ENST00000583800 NAA38Q9BRA0 125 aaKnown RBP3.48□□□□□ -1.85
SMCHD1-210ENST00000583800 SPRR2GQ9BYE4 73 aa3.47□□□□□ -1.85
SMCHD1-210ENST00000583800 Q8N9L7 120 aa3.45□□□□□ -1.86
SMCHD1-210ENST00000583800 HCG22E2RYF7 251 aa3.44□□□□□ -1.86
SMCHD1-210ENST00000583800 S4R3F8 94 aa3.44□□□□□ -1.86
SMCHD1-210ENST00000583800 CSAG1Q6PB30 78 aa3.42□□□□□ -1.86
SMCHD1-210ENST00000583800 CASC2Q6XLA1 102 aa3.42□□□□□ -1.86
SMCHD1-210ENST00000583800 LCA10Q71F78 164 aa3.42□□□□□ -1.86
SMCHD1-210ENST00000583800 IMUPQ9GZP8 106 aa3.42□□□□□ -1.86
SMCHD1-210ENST00000583800 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
SMCHD1-210ENST00000583800 KLKP1Q107X0 134 aa3.41□□□□□ -1.86
SMCHD1-210ENST00000583800 KTN1-AS1Q86SY8 53 aa3.41□□□□□ -1.86
SMCHD1-210ENST00000583800 A0A1B0GU33 70 aa3.4□□□□□ -1.87
SMCHD1-210ENST00000583800 KRTAP2-3P0C7H8 128 aa3.4□□□□□ -1.87
SMCHD1-210ENST00000583800 KRTAP2-4Q9BYR9 128 aa3.4□□□□□ -1.87
SMCHD1-210ENST00000583800 M0R143 59 aa3.39□□□□□ -1.87
SMCHD1-210ENST00000583800 C1orf64Q8NEQ6 169 aa3.39□□□□□ -1.87
SMCHD1-210ENST00000583800 HIST1H4AP62805 103 aaKnown RBP3.38□□□□□ -1.87
SMCHD1-210ENST00000583800 SPINT4Q6UDR6 99 aa3.37□□□□□ -1.87
SMCHD1-210ENST00000583800 KRTAP4-3Q9BYR4 195 aa3.37□□□□□ -1.87
SMCHD1-210ENST00000583800 SPRR2EP22531 72 aa3.36□□□□□ -1.87
SMCHD1-210ENST00000583800 SPRR2BP35325 72 aa3.36□□□□□ -1.87
SMCHD1-210ENST00000583800 SPRR2AP35326 72 aa3.36□□□□□ -1.87
SMCHD1-210ENST00000583800 SPRR2FQ96RM1 72 aa3.36□□□□□ -1.87
SMCHD1-210ENST00000583800 A8MU10 97 aa3.35□□□□□ -1.87
SMCHD1-210ENST00000583800 H3BT86 120 aa3.35□□□□□ -1.87
SMCHD1-210ENST00000583800 KRTAP10-12P60413 245 aa3.35□□□□□ -1.87
SMCHD1-210ENST00000583800 KRTAP25-1Q3LHN0 102 aa3.35□□□□□ -1.87
SMCHD1-210ENST00000583800 LINC01554Q52M75 96 aa3.34□□□□□ -1.87
SMCHD1-210ENST00000583800 TAX1BP3O14907 124 aa3.33□□□□□ -1.88
SMCHD1-210ENST00000583800 RPS28P62857 69 aaKnown RBP3.33□□□□□ -1.88
SMCHD1-210ENST00000583800 A0A087WVE0 104 aa3.32□□□□□ -1.88
SMCHD1-210ENST00000583800 CRIPTQ9P021 101 aa3.32□□□□□ -1.88
SMCHD1-210ENST00000583800 H3BPC8 53 aa3.31□□□□□ -1.88
SMCHD1-210ENST00000583800 R4GN34 69 aa3.3□□□□□ -1.88
SMCHD1-210ENST00000583800 A0A1W2PPM0 123 aa3.28□□□□□ -1.88
SMCHD1-210ENST00000583800 KRTAP8-1Q8IUC2 63 aa3.28□□□□□ -1.88
SMCHD1-210ENST00000583800 KRTAP2-1Q9BYU5 128 aa3.28□□□□□ -1.88
SMCHD1-210ENST00000583800 MT1XP80297 61 aa3.27□□□□□ -1.89
SMCHD1-210ENST00000583800 LCE3CQ5T5A8 94 aa3.27□□□□□ -1.89
SMCHD1-210ENST00000583800 KRTAP5-2Q701N4 177 aa3.27□□□□□ -1.89
SMCHD1-210ENST00000583800 UBL5Q9BZL1 73 aa3.27□□□□□ -1.89
SMCHD1-210ENST00000583800 TP53AIP1Q9HCN2 124 aa3.26□□□□□ -1.89
SMCHD1-210ENST00000583800 PRO2289Q9P1D8 64 aa3.26□□□□□ -1.89
SMCHD1-210ENST00000583800 CYP4F30PQ9H0H9 118 aa3.25□□□□□ -1.89
SMCHD1-210ENST00000583800 TRAV7A0A075B6U4 112 aa3.24□□□□□ -1.89
SMCHD1-210ENST00000583800 SPRR2DP22532 72 aa3.24□□□□□ -1.89
SMCHD1-210ENST00000583800 H0YAA0 97 aa3.23□□□□□ -1.89
SMCHD1-210ENST00000583800 K7EP34 96 aa3.23□□□□□ -1.89
SMCHD1-210ENST00000583800 SPCS1Q9Y6A9 102 aa3.22□□□□□ -1.89
SMCHD1-210ENST00000583800 NDUFC1O43677 76 aa3.21□□□□□ -1.9
SMCHD1-210ENST00000583800 SMIM6P0DI80 62 aa3.21□□□□□ -1.9
SMCHD1-210ENST00000583800 KRTAP12-2P59991 146 aa3.21□□□□□ -1.9
SMCHD1-210ENST00000583800 TRAV22A0A0B4J277 110 aa3.2□□□□□ -1.9
SMCHD1-210ENST00000583800 LOC101927531A0A1B0GV80 90 aa3.2□□□□□ -1.9
SMCHD1-210ENST00000583800 PLAC4Q8WY50 150 aa3.2□□□□□ -1.9
SMCHD1-210ENST00000583800 PRO0461Q9UI25 63 aa3.18□□□□□ -1.9
SMCHD1-210ENST00000583800 GPR98Q8WXG9 6306 aa3.16□□□□□ -1.9
SMCHD1-210ENST00000583800 ACYP1P07311 99 aa3.13□□□□□ -1.91
SMCHD1-210ENST00000583800 P0C880 135 aa3.13□□□□□ -1.91
SMCHD1-210ENST00000583800 H0Y9P7 68 aa3.12□□□□□ -1.91
SMCHD1-210ENST00000583800 M0QZ58 72 aa3.12□□□□□ -1.91
SMCHD1-210ENST00000583800 DSTQ03001 7570 aaKnown RBP3.11□□□□□ -1.91
SMCHD1-210ENST00000583800 ATOX1O00244 68 aa3.1□□□□□ -1.91
SMCHD1-210ENST00000583800 UQCRQO14949 82 aa3.1□□□□□ -1.91
SMCHD1-210ENST00000583800 BRK1Q8WUW1 75 aa3.09□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms