RNA–Protein interactions for RNA: ENST00000583289.5

PTPRM-215, Transcript of protein tyrosine phosphatase, receptor type M, humanhuman

TSL 5

Gene PTPRM, Length 792 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRM-215ENST00000583289 Q5VV11 94 aa2.53□□□□□ -2
PTPRM-215ENST00000583289 A6NED7 52 aa2.52□□□□□ -2.01
PTPRM-215ENST00000583289 VPS13DQ5THJ4 4388 aa2.52□□□□□ -2.01
PTPRM-215ENST00000583289 C7orf65Q6ZTY9 151 aa2.51□□□□□ -2.01
PTPRM-215ENST00000583289 CDC42SE1Q9NRR8 79 aa2.51□□□□□ -2.01
PTPRM-215ENST00000583289 DNAH7Q8WXX0 4024 aa2.5□□□□□ -2.01
PTPRM-215ENST00000583289 FBN3Q75N90 2809 aa2.5□□□□□ -2.01
PTPRM-215ENST00000583289 PMAIP1Q13794 54 aa2.5□□□□□ -2.01
PTPRM-215ENST00000583289 PLECQ15149 4684 aaKnown RBP2.5□□□□□ -2.01
PTPRM-215ENST00000583289 A0A1B0GU69 56 aa2.49□□□□□ -2.01
PTPRM-215ENST00000583289 SEC61GP60059 68 aa2.49□□□□□ -2.01
PTPRM-215ENST00000583289 A8MUU9 505 aa2.48□□□□□ -2.01
PTPRM-215ENST00000583289 C20orf166-AS1Q96NR2 134 aa2.48□□□□□ -2.01
PTPRM-215ENST00000583289 LYSTQ99698 3801 aa2.48□□□□□ -2.01
PTPRM-215ENST00000583289 HECTD4Q9Y4D8 3996 aa2.48□□□□□ -2.01
PTPRM-215ENST00000583289 DNAH10Q8IVF4 4471 aa2.48□□□□□ -2.01
PTPRM-215ENST00000583289 STARD9Q9P2P6 4700 aa2.47□□□□□ -2.01
PTPRM-215ENST00000583289 UQCR11O14957 56 aa2.47□□□□□ -2.01
PTPRM-215ENST00000583289 PRKDCP78527 4128 aaKnown RBP2.46□□□□□ -2.02
PTPRM-215ENST00000583289 RETNLBQ9BQ08 111 aa2.46□□□□□ -2.02
PTPRM-215ENST00000583289 DNAH6Q9C0G6 4158 aa2.46□□□□□ -2.02
PTPRM-215ENST00000583289 SMR3BP02814 79 aaPredicted RBP2.45□□□□□ -2.02
PTPRM-215ENST00000583289 LCA10Q71F78 164 aa2.45□□□□□ -2.02
PTPRM-215ENST00000583289 DNAH17Q9UFH2 4485 aa2.45□□□□□ -2.02
PTPRM-215ENST00000583289 SPATA8Q6RVD6 105 aa2.44□□□□□ -2.02
PTPRM-215ENST00000583289 KRTAP10-4P60372 401 aaPredicted RBP2.43□□□□□ -2.02
PTPRM-215ENST00000583289 LCE1CQ5T751 118 aa2.43□□□□□ -2.02
PTPRM-215ENST00000583289 LCE1BQ5T7P3 118 aa2.43□□□□□ -2.02
PTPRM-215ENST00000583289 ALMS1Q8TCU4 4167 aa2.42□□□□□ -2.02
PTPRM-215ENST00000583289 SPINK7P58062 85 aa2.42□□□□□ -2.02
PTPRM-215ENST00000583289 MIR22HGQ0VDD5 57 aa2.42□□□□□ -2.02
PTPRM-215ENST00000583289 KTN1-AS1Q86SY8 53 aa2.42□□□□□ -2.02
PTPRM-215ENST00000583289 KMT2AQ03164 3969 aa2.42□□□□□ -2.02
PTPRM-215ENST00000583289 DNAH2Q9P225 4427 aa2.41□□□□□ -2.02
PTPRM-215ENST00000583289 A6NN06 94 aa2.41□□□□□ -2.02
PTPRM-215ENST00000583289 C9orf92A6NGG3 77 aa2.4□□□□□ -2.03
PTPRM-215ENST00000583289 COX6B2Q6YFQ2 88 aa2.4□□□□□ -2.03
PTPRM-215ENST00000583289 DNAH8Q96JB1 4490 aa2.38□□□□□ -2.03
PTPRM-215ENST00000583289 PKD1P98161 4303 aa2.38□□□□□ -2.03
PTPRM-215ENST00000583289 A0A1B0GU33 70 aa2.37□□□□□ -2.03
PTPRM-215ENST00000583289 K7ERS5 55 aa2.37□□□□□ -2.03
PTPRM-215ENST00000583289 RPL37P61927 97 aaKnown RBP2.37□□□□□ -2.03
PTPRM-215ENST00000583289 Q5VSD8 79 aa2.37□□□□□ -2.03
PTPRM-215ENST00000583289 FRAS1Q86XX4 4008 aa2.35□□□□□ -2.03
PTPRM-215ENST00000583289 FLG2Q5D862 2391 aaPredicted RBP2.35□□□□□ -2.03
PTPRM-215ENST00000583289 DNAH11Q96DT5 4516 aa2.35□□□□□ -2.03
PTPRM-215ENST00000583289 DNAH5Q8TE73 4624 aa2.34□□□□□ -2.03
PTPRM-215ENST00000583289 H1FX-AS1Q4G0G2 97 aa2.34□□□□□ -2.03
PTPRM-215ENST00000583289 RBM12B-AS1Q9P1G2 102 aa2.34□□□□□ -2.03
PTPRM-215ENST00000583289 DNHD1Q96M86 4753 aa2.34□□□□□ -2.03
PTPRM-215ENST00000583289 LRP1BQ9NZR2 4599 aa2.34□□□□□ -2.04
PTPRM-215ENST00000583289 HYDINQ4G0P3 5121 aa2.33□□□□□ -2.04
PTPRM-215ENST00000583289 VPS13BQ7Z7G8 4022 aa2.33□□□□□ -2.04
PTPRM-215ENST00000583289 TPRXLQ17RH7 258 aa2.32□□□□□ -2.04
PTPRM-215ENST00000583289 FAT2Q9NYQ8 4349 aa2.31□□□□□ -2.04
PTPRM-215ENST00000583289 DMBT1Q9UGM3 2413 aaPredicted RBP2.31□□□□□ -2.04
PTPRM-215ENST00000583289 S4R3F8 94 aa2.3□□□□□ -2.04
PTPRM-215ENST00000583289 MT1HL1P0DM35 61 aa2.28□□□□□ -2.04
PTPRM-215ENST00000583289 CSAG1Q6PB30 78 aa2.28□□□□□ -2.04
PTPRM-215ENST00000583289 SACSQ9NZJ4 4579 aa2.27□□□□□ -2.05
PTPRM-215ENST00000583289 H0YAA0 97 aa2.27□□□□□ -2.05
PTPRM-215ENST00000583289 M0QZ58 72 aa2.26□□□□□ -2.05
PTPRM-215ENST00000583289 RYR2Q92736 4967 aa2.25□□□□□ -2.05
PTPRM-215ENST00000583289 PP632Q6XCG6 107 aa2.25□□□□□ -2.05
PTPRM-215ENST00000583289 DYNC1H1Q14204 4646 aaKnown RBP2.25□□□□□ -2.05
PTPRM-215ENST00000583289 LINC01554Q52M75 96 aa2.24□□□□□ -2.05
PTPRM-215ENST00000583289 PKHD1L1Q86WI1 4243 aa2.23□□□□□ -2.05
PTPRM-215ENST00000583289 PKHD1P08F94 4074 aa2.23□□□□□ -2.05
PTPRM-215ENST00000583289 LCE3DQ9BYE3 92 aa2.23□□□□□ -2.05
PTPRM-215ENST00000583289 ROMO1P60602 79 aa2.22□□□□□ -2.05
PTPRM-215ENST00000583289 APOBP04114 4563 aaKnown RBP2.22□□□□□ -2.05
PTPRM-215ENST00000583289 KRTAP25-1Q3LHN0 102 aa2.21□□□□□ -2.06
PTPRM-215ENST00000583289 ADM2Q7Z4H4 148 aa2.21□□□□□ -2.06
PTPRM-215ENST00000583289 RYR1P21817 5038 aa2.19□□□□□ -2.06
PTPRM-215ENST00000583289 CRIPTQ9P021 101 aa2.18□□□□□ -2.06
PTPRM-215ENST00000583289 P0C880 135 aa2.17□□□□□ -2.06
PTPRM-215ENST00000583289 FAT1Q14517 4588 aa2.17□□□□□ -2.06
PTPRM-215ENST00000583289 A0A0D9SG42 100 aa2.16□□□□□ -2.06
PTPRM-215ENST00000583289 KRTAP13-4Q3LI77 160 aa2.15□□□□□ -2.07
PTPRM-215ENST00000583289 R4GN34 69 aa2.15□□□□□ -2.07
PTPRM-215ENST00000583289 KMT2CQ8NEZ4 4911 aaKnown RBP2.15□□□□□ -2.07
PTPRM-215ENST00000583289 FAT3Q8TDW7 4589 aa2.15□□□□□ -2.07
PTPRM-215ENST00000583289 SPINT4Q6UDR6 99 aa2.14□□□□□ -2.07
PTPRM-215ENST00000583289 KIAA1109Q2LD37 5005 aa2.14□□□□□ -2.07
PTPRM-215ENST00000583289 TNXBP22105 4242 aa2.13□□□□□ -2.07
PTPRM-215ENST00000583289 KRTAP12-1P59990 96 aa2.13□□□□□ -2.07
PTPRM-215ENST00000583289 KRTAP5-8O75690 187 aa2.12□□□□□ -2.07
PTPRM-215ENST00000583289 CAMK2N1Q7Z7J9 78 aa2.11□□□□□ -2.07
PTPRM-215ENST00000583289 LRP1Q07954 4544 aaKnown RBP2.11□□□□□ -2.07
PTPRM-215ENST00000583289 HSPG2P98160 4391 aa2.11□□□□□ -2.07
PTPRM-215ENST00000583289 RYR3Q15413 4870 aa2.1□□□□□ -2.07
PTPRM-215ENST00000583289 MYCBP2O75592 4640 aa2.04□□□□□ -2.08
PTPRM-215ENST00000583289 KRTAP10-10P60014 251 aa2.04□□□□□ -2.08
PTPRM-215ENST00000583289 KRTAP4-1Q9BYQ7 146 aa2.04□□□□□ -2.08
PTPRM-215ENST00000583289 KRTAP19-2Q3LHN2 52 aa2.03□□□□□ -2.08
PTPRM-215ENST00000583289 EPPK1P58107 5090 aaKnown RBP2.02□□□□□ -2.09
PTPRM-215ENST00000583289 LRP2P98164 4655 aa2.02□□□□□ -2.09
PTPRM-215ENST00000583289 ABCA13Q86UQ4 5058 aa2.01□□□□□ -2.09
PTPRM-215ENST00000583289 C10orf95Q9H7T3 257 aa2□□□□□ -2.09
PTPRM-215ENST00000583289 TNP1P09430 55 aa1.99□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms