RNA–Protein interactions for RNA: ENST00000582844.5

CSNK1D-221, Transcript of casein kinase 1 delta, humanhuman

TSL 5

Gene CSNK1D, Length 957 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-221ENST00000582844 KRTAP10-5P60370 271 aa9.38□□□□□ -0.91
CSNK1D-221ENST00000582844 ATP5EP2Q5VTU8 51 aa9.38□□□□□ -0.91
CSNK1D-221ENST00000582844 NEBP20929 6669 aa9.37□□□□□ -0.91
CSNK1D-221ENST00000582844 FAM240AA0A1B0GVK7 77 aa9.37□□□□□ -0.91
CSNK1D-221ENST00000582844 UQCRQO14949 82 aa9.37□□□□□ -0.91
CSNK1D-221ENST00000582844 H0Y9P7 68 aa9.35□□□□□ -0.91
CSNK1D-221ENST00000582844 CRIPTQ9P021 101 aa9.34□□□□□ -0.91
CSNK1D-221ENST00000582844 ATOX1O00244 68 aa9.32□□□□□ -0.92
CSNK1D-221ENST00000582844 IMUPQ9GZP8 106 aa9.31□□□□□ -0.92
CSNK1D-221ENST00000582844 NDUFC1O43677 76 aa9.29□□□□□ -0.92
CSNK1D-221ENST00000582844 MUC12Q9UKN1 5478 aa9.25□□□□□ -0.93
CSNK1D-221ENST00000582844 H0YAA0 97 aa9.23□□□□□ -0.93
CSNK1D-221ENST00000582844 LINC00643Q86TS7 51 aa9.22□□□□□ -0.93
CSNK1D-221ENST00000582844 LINC00208Q96KT6 92 aa9.21□□□□□ -0.94
CSNK1D-221ENST00000582844 A8MUN3 132 aa9.19□□□□□ -0.94
CSNK1D-221ENST00000582844 ADM2Q7Z4H4 148 aa9.17□□□□□ -0.94
CSNK1D-221ENST00000582844 OCR1Q9BZK8 76 aa9.13□□□□□ -0.95
CSNK1D-221ENST00000582844 KRTAP5-9P26371 169 aa9.1□□□□□ -0.95
CSNK1D-221ENST00000582844 MP68P56378 58 aa9.1□□□□□ -0.95
CSNK1D-221ENST00000582844 KMT2DO14686 5537 aa9.04□□□□□ -0.96
CSNK1D-221ENST00000582844 A0A1B0GV90 55 aa9.03□□□□□ -0.96
CSNK1D-221ENST00000582844 MDN1Q9NU22 5596 aa8.98□□□□□ -0.97
CSNK1D-221ENST00000582844 P0C880 135 aa8.95□□□□□ -0.98
CSNK1D-221ENST00000582844 MT1XP80297 61 aa8.95□□□□□ -0.98
CSNK1D-221ENST00000582844 PRO2289Q9P1D8 64 aa8.95□□□□□ -0.98
CSNK1D-221ENST00000582844 KRTAP20-1Q3LI63 56 aa8.94□□□□□ -0.98
CSNK1D-221ENST00000582844 PLAC4Q8WY50 150 aa8.94□□□□□ -0.98
CSNK1D-221ENST00000582844 H3BPC8 53 aa8.93□□□□□ -0.98
CSNK1D-221ENST00000582844 R4GN34 69 aa8.93□□□□□ -0.98
CSNK1D-221ENST00000582844 DMAC1Q96GE9 116 aa8.91□□□□□ -0.98
CSNK1D-221ENST00000582844 SCGB1A1P11684 91 aa8.88□□□□□ -0.99
CSNK1D-221ENST00000582844 C20orf197Q8N268 126 aa8.87□□□□□ -0.99
CSNK1D-221ENST00000582844 M0QZ58 72 aa8.86□□□□□ -0.99
CSNK1D-221ENST00000582844 J3QR89 54 aa8.85□□□□□ -0.99
CSNK1D-221ENST00000582844 KRTAP3-2Q9BYR7 98 aa8.85□□□□□ -0.99
CSNK1D-221ENST00000582844 SPRR2FQ96RM1 72 aa8.82□□□□□ -1
CSNK1D-221ENST00000582844 LINC01554Q52M75 96 aa8.76□□□□□ -1.01
CSNK1D-221ENST00000582844 KRTAP8-1Q8IUC2 63 aa8.74□□□□□ -1.01
CSNK1D-221ENST00000582844 KRTAP12-2P59991 146 aa8.73□□□□□ -1.01
CSNK1D-221ENST00000582844 SPRR2EP22531 72 aa8.72□□□□□ -1.01
CSNK1D-221ENST00000582844 SPRR2BP35325 72 aa8.72□□□□□ -1.01
CSNK1D-221ENST00000582844 SPRR2AP35326 72 aa8.72□□□□□ -1.01
CSNK1D-221ENST00000582844 TRAV7A0A075B6U4 112 aa8.71□□□□□ -1.02
CSNK1D-221ENST00000582844 KRTAP2-3P0C7H8 128 aa8.69□□□□□ -1.02
CSNK1D-221ENST00000582844 KRTAP2-4Q9BYR9 128 aa8.69□□□□□ -1.02
CSNK1D-221ENST00000582844 ACYP2P14621 99 aa8.67□□□□□ -1.02
CSNK1D-221ENST00000582844 KRTAP4-8A0A0G2JLE6 195 aa8.64□□□□□ -1.03
CSNK1D-221ENST00000582844 KRTAP4-8Q9BYQ9 185 aa8.64□□□□□ -1.03
CSNK1D-221ENST00000582844 MT-ATP8P03928 68 aa8.61□□□□□ -1.03
CSNK1D-221ENST00000582844 LCE1AQ5T7P2 110 aa8.59□□□□□ -1.03
CSNK1D-221ENST00000582844 SPTSSBQ8NFR3 76 aa8.57□□□□□ -1.04
CSNK1D-221ENST00000582844 KRTAP10-7P60409 375 aaPredicted RBP8.56□□□□□ -1.04
CSNK1D-221ENST00000582844 SMIM20Q8N5G0 67 aa8.56□□□□□ -1.04
CSNK1D-221ENST00000582844 CHKB-CPT1BH3BT56 60 aa8.5□□□□□ -1.05
CSNK1D-221ENST00000582844 KRTAP10-12P60413 245 aa8.49□□□□□ -1.05
CSNK1D-221ENST00000582844 K7ERU9 68 aa8.46□□□□□ -1.06
CSNK1D-221ENST00000582844 SNURFQ9Y675 71 aa8.46□□□□□ -1.06
CSNK1D-221ENST00000582844 SPRR2DP22532 72 aa8.43□□□□□ -1.06
CSNK1D-221ENST00000582844 KRTAP2-2Q9BYT5 123 aa8.4□□□□□ -1.06
CSNK1D-221ENST00000582844 KRTAP2-1Q9BYU5 128 aa8.4□□□□□ -1.06
CSNK1D-221ENST00000582844 SPANXA2-OT1Q8N9U9 137 aa8.34□□□□□ -1.07
CSNK1D-221ENST00000582844 KRTAP13-4Q3LI77 160 aa8.31□□□□□ -1.08
CSNK1D-221ENST00000582844 SERP2Q8N6R1 65 aa8.25□□□□□ -1.09
CSNK1D-221ENST00000582844 LCE3BQ5TA77 95 aa8.21□□□□□ -1.1
CSNK1D-221ENST00000582844 CAMK2N1Q7Z7J9 78 aa8.19□□□□□ -1.1
CSNK1D-221ENST00000582844 COA5Q86WW8 74 aa8.13□□□□□ -1.11
CSNK1D-221ENST00000582844 A0A0D9SG42 100 aa8.04□□□□□ -1.12
CSNK1D-221ENST00000582844 SEC61GP60059 68 aa8.03□□□□□ -1.12
CSNK1D-221ENST00000582844 SERP1Q9Y6X1 66 aa8.03□□□□□ -1.12
CSNK1D-221ENST00000582844 KRTAP19-7Q3SYF9 63 aa8.01□□□□□ -1.13
CSNK1D-221ENST00000582844 SPATA8Q6RVD6 105 aa8□□□□□ -1.13
CSNK1D-221ENST00000582844 DSTQ03001 7570 aaKnown RBP7.99□□□□□ -1.13
CSNK1D-221ENST00000582844 COX7CP15954 63 aa7.95□□□□□ -1.14
CSNK1D-221ENST00000582844 MT1EP04732 61 aa7.94□□□□□ -1.14
CSNK1D-221ENST00000582844 A0A1B0GU33 70 aa7.93□□□□□ -1.14
CSNK1D-221ENST00000582844 LCE5AQ5TCM9 118 aa7.93□□□□□ -1.14
CSNK1D-221ENST00000582844 SPINT4Q6UDR6 99 aa7.93□□□□□ -1.14
CSNK1D-221ENST00000582844 CYSTM1Q9H1C7 97 aa7.9□□□□□ -1.14
CSNK1D-221ENST00000582844 KRTAP19-3Q7Z4W3 81 aa7.88□□□□□ -1.15
CSNK1D-221ENST00000582844 H7BZZ5 65 aa7.87□□□□□ -1.15
CSNK1D-221ENST00000582844 KRTAP12-1P59990 96 aa7.86□□□□□ -1.15
CSNK1D-221ENST00000582844 KRTAP19-5Q3LI72 72 aa7.78□□□□□ -1.16
CSNK1D-221ENST00000582844 A0A1B0GU69 56 aa7.72□□□□□ -1.17
CSNK1D-221ENST00000582844 MT1GP13640 62 aa7.7□□□□□ -1.18
CSNK1D-221ENST00000582844 KRTAP4-9Q9BYQ8 210 aa7.7□□□□□ -1.18
CSNK1D-221ENST00000582844 SMIM26A0A096LP01 95 aa7.69□□□□□ -1.18
CSNK1D-221ENST00000582844 A8MU10 97 aa7.68□□□□□ -1.18
CSNK1D-221ENST00000582844 GPR98Q8WXG9 6306 aa7.66□□□□□ -1.18
CSNK1D-221ENST00000582844 PP632Q6XCG6 107 aa7.61□□□□□ -1.19
CSNK1D-221ENST00000582844 MT1MQ8N339 61 aa7.57□□□□□ -1.2
CSNK1D-221ENST00000582844 MT1LQ93083 61 aa7.57□□□□□ -1.2
CSNK1D-221ENST00000582844 ANAPC13Q9BS18 74 aa7.57□□□□□ -1.2
CSNK1D-221ENST00000582844 C10orf95Q9H7T3 257 aa7.55□□□□□ -1.2
CSNK1D-221ENST00000582844 LCE3AQ5TA76 89 aa7.54□□□□□ -1.2
CSNK1D-221ENST00000582844 TNP1P09430 55 aa7.51□□□□□ -1.21
CSNK1D-221ENST00000582844 LCE1DQ5T752 114 aa7.48□□□□□ -1.21
CSNK1D-221ENST00000582844 CCDC179H3BU77 68 aa7.47□□□□□ -1.21
CSNK1D-221ENST00000582844 KRTAP4-3Q9BYR4 195 aa7.44□□□□□ -1.22
CSNK1D-221ENST00000582844 LCE4AQ5TA78 99 aa7.42□□□□□ -1.22
CSNK1D-221ENST00000582844 PRR15LQ9BU68 103 aa7.42□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 102.1 ms