RNA–Protein interactions for RNA: ENST00000581868.1

RNF43-205, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,610 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-205ENST00000581868 HSPG2P98160 4391 aa7.04□□□□□ -1.28
RNF43-205ENST00000581868 RYR2Q92736 4967 aa7.04□□□□□ -1.28
RNF43-205ENST00000581868 KRTAP10-8P60410 259 aa7.03□□□□□ -1.28
RNF43-205ENST00000581868 TNXBP22105 4242 aa7.02□□□□□ -1.29
RNF43-205ENST00000581868 KRTAP10-6P60371 365 aaPredicted RBP7.02□□□□□ -1.29
RNF43-205ENST00000581868 RPL37P61927 97 aaKnown RBP7.02□□□□□ -1.29
RNF43-205ENST00000581868 A0A0D9SG42 100 aa7.02□□□□□ -1.29
RNF43-205ENST00000581868 KMT2CQ8NEZ4 4911 aaKnown RBP7.01□□□□□ -1.29
RNF43-205ENST00000581868 KRTAP13-4Q3LI77 160 aa7□□□□□ -1.29
RNF43-205ENST00000581868 XP32Q5T750 250 aa7□□□□□ -1.29
RNF43-205ENST00000581868 MYCBP2O75592 4640 aa7□□□□□ -1.29
RNF43-205ENST00000581868 Q5VSD8 79 aa6.99□□□□□ -1.29
RNF43-205ENST00000581868 S4R3F8 94 aa6.98□□□□□ -1.29
RNF43-205ENST00000581868 ROMO1P60602 79 aa6.97□□□□□ -1.29
RNF43-205ENST00000581868 KRTAP3-2Q9BYR7 98 aa6.97□□□□□ -1.29
RNF43-205ENST00000581868 P0C880 135 aa6.92□□□□□ -1.3
RNF43-205ENST00000581868 KRTAP17-1Q9BYP8 105 aa6.86□□□□□ -1.31
RNF43-205ENST00000581868 LPAP08519 4548 aa6.8□□□□□ -1.32
RNF43-205ENST00000581868 MT1HL1P0DM35 61 aa6.79□□□□□ -1.32
RNF43-205ENST00000581868 TPRXLQ17RH7 258 aa6.79□□□□□ -1.32
RNF43-205ENST00000581868 RYR1P21817 5038 aa6.79□□□□□ -1.32
RNF43-205ENST00000581868 KRTAP12-2P59991 146 aa6.78□□□□□ -1.32
RNF43-205ENST00000581868 C10orf95Q9H7T3 257 aa6.78□□□□□ -1.32
RNF43-205ENST00000581868 SPINT4Q6UDR6 99 aa6.76□□□□□ -1.33
RNF43-205ENST00000581868 RYR3Q15413 4870 aa6.75□□□□□ -1.33
RNF43-205ENST00000581868 KIAA1109Q2LD37 5005 aa6.74□□□□□ -1.33
RNF43-205ENST00000581868 LRP2P98164 4655 aa6.74□□□□□ -1.33
RNF43-205ENST00000581868 A0A0A0MQY5 61 aa6.73□□□□□ -1.33
RNF43-205ENST00000581868 KRTAP12-1P59990 96 aa6.7□□□□□ -1.34
RNF43-205ENST00000581868 M0QZ58 72 aa6.63□□□□□ -1.35
RNF43-205ENST00000581868 ABCA13Q86UQ4 5058 aa6.55□□□□□ -1.36
RNF43-205ENST00000581868 EPPK1P58107 5090 aaKnown RBP6.53□□□□□ -1.36
RNF43-205ENST00000581868 R4GN34 69 aa6.51□□□□□ -1.37
RNF43-205ENST00000581868 NDUFAF8A1L188 74 aa6.49□□□□□ -1.37
RNF43-205ENST00000581868 KRTAP4-5Q9BYR2 181 aa6.48□□□□□ -1.37
RNF43-205ENST00000581868 KRTAP15-1Q3LI76 137 aa6.47□□□□□ -1.37
RNF43-205ENST00000581868 LORP23490 312 aaPredicted RBP6.44□□□□□ -1.38
RNF43-205ENST00000581868 SEC61BP60468 96 aaKnown RBP6.42□□□□□ -1.38
RNF43-205ENST00000581868 KRTAP4-1Q9BYQ7 146 aa6.39□□□□□ -1.39
RNF43-205ENST00000581868 MUC17Q685J3 4493 aa6.39□□□□□ -1.39
RNF43-205ENST00000581868 J3QL48 77 aa6.34□□□□□ -1.39
RNF43-205ENST00000581868 LUZP6Q538Z0 58 aa6.28□□□□□ -1.4
RNF43-205ENST00000581868 BIRC6Q9NR09 4857 aa6.23□□□□□ -1.41
RNF43-205ENST00000581868 KRTAP19-2Q3LHN2 52 aa6.22□□□□□ -1.41
RNF43-205ENST00000581868 CAMK2N1Q7Z7J9 78 aa6.21□□□□□ -1.41
RNF43-205ENST00000581868 PLAC4Q8WY50 150 aa6.18□□□□□ -1.42
RNF43-205ENST00000581868 MUC2Q02817 5179 aa6.18□□□□□ -1.42
RNF43-205ENST00000581868 HERC2O95714 4834 aa6.16□□□□□ -1.42
RNF43-205ENST00000581868 PP632Q6XCG6 107 aa6.06□□□□□ -1.44
RNF43-205ENST00000581868 FLGP20930 4061 aaPredicted RBP6.04□□□□□ -1.44
RNF43-205ENST00000581868 PCLOQ9Y6V0 5065 aa5.97□□□□□ -1.45
RNF43-205ENST00000581868 TNP1P09430 55 aa5.95□□□□□ -1.46
RNF43-205ENST00000581868 HERC1Q15751 4861 aa5.93□□□□□ -1.46
RNF43-205ENST00000581868 FAT4Q6V0I7 4981 aa5.86□□□□□ -1.47
RNF43-205ENST00000581868 LCE2CQ5TA81 110 aa5.83□□□□□ -1.48
RNF43-205ENST00000581868 HMCN2Q8NDA2 5059 aa5.81□□□□□ -1.48
RNF43-205ENST00000581868 M0R2T5 61 aa5.79□□□□□ -1.48
RNF43-205ENST00000581868 KRTAP23-1A1A580 65 aa5.78□□□□□ -1.48
RNF43-205ENST00000581868 KRTAP19-1Q8IUB9 90 aa5.77□□□□□ -1.49
RNF43-205ENST00000581868 SPRR2GQ9BYE4 73 aa5.77□□□□□ -1.49
RNF43-205ENST00000581868 RNF213Q63HN8 5207 aa5.74□□□□□ -1.49
RNF43-205ENST00000581868 MT1HP80294 61 aa5.67□□□□□ -1.5
RNF43-205ENST00000581868 SPRR5A0A1B0GTR4 108 aa5.67□□□□□ -1.5
RNF43-205ENST00000581868 KRTAP10-10P60014 251 aa5.66□□□□□ -1.5
RNF43-205ENST00000581868 LCE3AQ5TA76 89 aa5.64□□□□□ -1.51
RNF43-205ENST00000581868 UBR4Q5T4S7 5183 aa5.64□□□□□ -1.51
RNF43-205ENST00000581868 MT1FP04733 61 aa5.63□□□□□ -1.51
RNF43-205ENST00000581868 MT2AP02795 61 aa5.62□□□□□ -1.51
RNF43-205ENST00000581868 KRTAP9-8Q9BYQ0 159 aa5.56□□□□□ -1.52
RNF43-205ENST00000581868 PRO2289Q9P1D8 64 aa5.5□□□□□ -1.53
RNF43-205ENST00000581868 KRTAP19-8Q3LI54 63 aa5.48□□□□□ -1.53
RNF43-205ENST00000581868 MT1BP07438 61 aa5.45□□□□□ -1.54
RNF43-205ENST00000581868 KRTAP10-5P60370 271 aa5.45□□□□□ -1.54
RNF43-205ENST00000581868 KRTAP8-1Q8IUC2 63 aa5.44□□□□□ -1.54
RNF43-205ENST00000581868 MT1XP80297 61 aa5.44□□□□□ -1.54
RNF43-205ENST00000581868 KRTAP10-12P60413 245 aa5.37□□□□□ -1.55
RNF43-205ENST00000581868 KRTAP12-3P60328 96 aa5.35□□□□□ -1.55
RNF43-205ENST00000581868 KRTAP10-7P60409 375 aaPredicted RBP5.33□□□□□ -1.56
RNF43-205ENST00000581868 KRTAP9-3Q9BYQ3 159 aa5.31□□□□□ -1.56
RNF43-205ENST00000581868 INE1O15225 51 aa5.3□□□□□ -1.56
RNF43-205ENST00000581868 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
RNF43-205ENST00000581868 LCE2BO14633 110 aa5.11□□□□□ -1.59
RNF43-205ENST00000581868 USH2AO75445 5202 aa5.11□□□□□ -1.59
RNF43-205ENST00000581868 KMT2DO14686 5537 aa5.07□□□□□ -1.6
RNF43-205ENST00000581868 LCE2DQ5TA82 110 aaPredicted RBP5.07□□□□□ -1.6
RNF43-205ENST00000581868 LCE3CQ5T5A8 94 aa5.04□□□□□ -1.6
RNF43-205ENST00000581868 KRTAP4-8A0A0G2JLE6 195 aa5.01□□□□□ -1.61
RNF43-205ENST00000581868 KRTAP4-8Q9BYQ9 185 aa5.01□□□□□ -1.61
RNF43-205ENST00000581868 KRTAP9-6A8MVA2 160 aa4.89□□□□□ -1.63
RNF43-205ENST00000581868 LCE2AQ5TA79 106 aaPredicted RBP4.89□□□□□ -1.63
RNF43-205ENST00000581868 KRTAP4-7Q9BYR0 210 aa4.85□□□□□ -1.63
RNF43-205ENST00000581868 KRTAP19-7Q3SYF9 63 aa4.84□□□□□ -1.63
RNF43-205ENST00000581868 FSIP2Q5CZC0 6907 aa4.81□□□□□ -1.64
RNF43-205ENST00000581868 MT1LQ93083 61 aa4.71□□□□□ -1.66
RNF43-205ENST00000581868 KRTAP9-2Q9BYQ4 174 aa4.7□□□□□ -1.66
RNF43-205ENST00000581868 KRTAP2-3P0C7H8 128 aa4.69□□□□□ -1.66
RNF43-205ENST00000581868 KRTAP2-4Q9BYR9 128 aa4.69□□□□□ -1.66
RNF43-205ENST00000581868 KRTAP2-1Q9BYU5 128 aa4.69□□□□□ -1.66
RNF43-205ENST00000581868 MT1EP04732 61 aa4.69□□□□□ -1.66
RNF43-205ENST00000581868 SSPOA2VEC9 5147 aa4.64□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms