RNA–Protein interactions for RNA: ENST00000581849.1

CASC3-207, Transcript of CASC3, exon junction complex subunit, humanhuman

TSL 2

Gene CASC3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC3-207ENST00000581849 FAM240AA0A1B0GVK7 77 aa9.97□□□□□ -0.81
CASC3-207ENST00000581849 CRIPTQ9P021 101 aa9.94□□□□□ -0.82
CASC3-207ENST00000581849 UQCRQO14949 82 aa9.91□□□□□ -0.82
CASC3-207ENST00000581849 ATOX1O00244 68 aa9.89□□□□□ -0.83
CASC3-207ENST00000581849 KRTAP10-5P60370 271 aa9.88□□□□□ -0.83
CASC3-207ENST00000581849 A0A087WVE0 104 aa9.87□□□□□ -0.83
CASC3-207ENST00000581849 HIST1H4AP62805 103 aaKnown RBP9.86□□□□□ -0.83
CASC3-207ENST00000581849 IMUPQ9GZP8 106 aa9.86□□□□□ -0.83
CASC3-207ENST00000581849 H0Y9P7 68 aa9.83□□□□□ -0.84
CASC3-207ENST00000581849 H0YAA0 97 aa9.81□□□□□ -0.84
CASC3-207ENST00000581849 NEBP20929 6669 aa9.8□□□□□ -0.84
CASC3-207ENST00000581849 NDUFC1O43677 76 aa9.8□□□□□ -0.84
CASC3-207ENST00000581849 A8MUN3 132 aa9.78□□□□□ -0.84
CASC3-207ENST00000581849 LINC00643Q86TS7 51 aa9.75□□□□□ -0.85
CASC3-207ENST00000581849 MUC12Q9UKN1 5478 aa9.68□□□□□ -0.86
CASC3-207ENST00000581849 LINC00208Q96KT6 92 aa9.66□□□□□ -0.86
CASC3-207ENST00000581849 MP68P56378 58 aa9.63□□□□□ -0.87
CASC3-207ENST00000581849 KRTAP5-9P26371 169 aa9.62□□□□□ -0.87
CASC3-207ENST00000581849 OCR1Q9BZK8 76 aa9.62□□□□□ -0.87
CASC3-207ENST00000581849 ADM2Q7Z4H4 148 aa9.6□□□□□ -0.87
CASC3-207ENST00000581849 H3BPC8 53 aa9.52□□□□□ -0.89
CASC3-207ENST00000581849 PRO2289Q9P1D8 64 aa9.49□□□□□ -0.89
CASC3-207ENST00000581849 KMT2DO14686 5537 aa9.48□□□□□ -0.89
CASC3-207ENST00000581849 C20orf197Q8N268 126 aa9.45□□□□□ -0.9
CASC3-207ENST00000581849 J3QR89 54 aa9.43□□□□□ -0.9
CASC3-207ENST00000581849 DMAC1Q96GE9 116 aa9.42□□□□□ -0.9
CASC3-207ENST00000581849 PLAC4Q8WY50 150 aa9.41□□□□□ -0.9
CASC3-207ENST00000581849 R4GN34 69 aa9.41□□□□□ -0.9
CASC3-207ENST00000581849 MDN1Q9NU22 5596 aa9.41□□□□□ -0.9
CASC3-207ENST00000581849 KRTAP20-1Q3LI63 56 aa9.4□□□□□ -0.9
CASC3-207ENST00000581849 MT1XP80297 61 aa9.39□□□□□ -0.91
CASC3-207ENST00000581849 P0C880 135 aa9.36□□□□□ -0.91
CASC3-207ENST00000581849 K7ERU9 68 aa9.35□□□□□ -0.91
CASC3-207ENST00000581849 SCGB1A1P11684 91 aa9.33□□□□□ -0.92
CASC3-207ENST00000581849 M0QZ58 72 aa9.3□□□□□ -0.92
CASC3-207ENST00000581849 KRTAP12-2P59991 146 aa9.27□□□□□ -0.93
CASC3-207ENST00000581849 KRTAP3-2Q9BYR7 98 aa9.27□□□□□ -0.93
CASC3-207ENST00000581849 TRAV7A0A075B6U4 112 aa9.25□□□□□ -0.93
CASC3-207ENST00000581849 MT-ATP8P03928 68 aa9.24□□□□□ -0.93
CASC3-207ENST00000581849 SPRR2FQ96RM1 72 aa9.24□□□□□ -0.93
CASC3-207ENST00000581849 KRTAP8-1Q8IUC2 63 aa9.18□□□□□ -0.94
CASC3-207ENST00000581849 ACYP2P14621 99 aa9.16□□□□□ -0.94
CASC3-207ENST00000581849 KRTAP2-3P0C7H8 128 aa9.14□□□□□ -0.95
CASC3-207ENST00000581849 KRTAP2-4Q9BYR9 128 aa9.14□□□□□ -0.95
CASC3-207ENST00000581849 SPRR2EP22531 72 aa9.13□□□□□ -0.95
CASC3-207ENST00000581849 SPRR2BP35325 72 aa9.13□□□□□ -0.95
CASC3-207ENST00000581849 SPRR2AP35326 72 aa9.13□□□□□ -0.95
CASC3-207ENST00000581849 LINC01554Q52M75 96 aa9.13□□□□□ -0.95
CASC3-207ENST00000581849 SMIM20Q8N5G0 67 aa9.12□□□□□ -0.95
CASC3-207ENST00000581849 SPTSSBQ8NFR3 76 aa9.11□□□□□ -0.95
CASC3-207ENST00000581849 LCE1AQ5T7P2 110 aa9.02□□□□□ -0.97
CASC3-207ENST00000581849 KRTAP4-8A0A0G2JLE6 195 aa8.98□□□□□ -0.97
CASC3-207ENST00000581849 KRTAP4-8Q9BYQ9 185 aa8.98□□□□□ -0.97
CASC3-207ENST00000581849 CHKB-CPT1BH3BT56 60 aa8.96□□□□□ -0.98
CASC3-207ENST00000581849 KRTAP10-12P60413 245 aa8.95□□□□□ -0.98
CASC3-207ENST00000581849 KRTAP10-7P60409 375 aaPredicted RBP8.93□□□□□ -0.98
CASC3-207ENST00000581849 SPANXA2-OT1Q8N9U9 137 aa8.86□□□□□ -0.99
CASC3-207ENST00000581849 KRTAP2-2Q9BYT5 123 aa8.85□□□□□ -0.99
CASC3-207ENST00000581849 KRTAP2-1Q9BYU5 128 aa8.85□□□□□ -0.99
CASC3-207ENST00000581849 SPRR2DP22532 72 aa8.84□□□□□ -0.99
CASC3-207ENST00000581849 SNURFQ9Y675 71 aa8.84□□□□□ -0.99
CASC3-207ENST00000581849 SERP2Q8N6R1 65 aa8.73□□□□□ -1.01
CASC3-207ENST00000581849 KRTAP13-4Q3LI77 160 aa8.68□□□□□ -1.02
CASC3-207ENST00000581849 LCE3BQ5TA77 95 aa8.61□□□□□ -1.03
CASC3-207ENST00000581849 CAMK2N1Q7Z7J9 78 aa8.61□□□□□ -1.03
CASC3-207ENST00000581849 COX7CP15954 63 aa8.6□□□□□ -1.03
CASC3-207ENST00000581849 COA5Q86WW8 74 aa8.55□□□□□ -1.04
CASC3-207ENST00000581849 CYSTM1Q9H1C7 97 aa8.55□□□□□ -1.04
CASC3-207ENST00000581849 ANAPC13Q9BS18 74 aa8.51□□□□□ -1.05
CASC3-207ENST00000581849 SEC61GP60059 68 aa8.5□□□□□ -1.05
CASC3-207ENST00000581849 SERP1Q9Y6X1 66 aa8.48□□□□□ -1.05
CASC3-207ENST00000581849 CCDC179H3BU77 68 aa8.43□□□□□ -1.06
CASC3-207ENST00000581849 H7BZZ5 65 aa8.42□□□□□ -1.06
CASC3-207ENST00000581849 KRTAP19-7Q3SYF9 63 aa8.41□□□□□ -1.06
CASC3-207ENST00000581849 A0A0D9SG42 100 aa8.37□□□□□ -1.07
CASC3-207ENST00000581849 LCE5AQ5TCM9 118 aa8.36□□□□□ -1.07
CASC3-207ENST00000581849 A0A1B0GU33 70 aa8.35□□□□□ -1.07
CASC3-207ENST00000581849 MT1EP04732 61 aa8.35□□□□□ -1.07
CASC3-207ENST00000581849 SPATA8Q6RVD6 105 aa8.34□□□□□ -1.07
CASC3-207ENST00000581849 KRTAP19-3Q7Z4W3 81 aa8.31□□□□□ -1.08
CASC3-207ENST00000581849 SPINT4Q6UDR6 99 aa8.29□□□□□ -1.08
CASC3-207ENST00000581849 KRTAP12-1P59990 96 aa8.25□□□□□ -1.09
CASC3-207ENST00000581849 DSTQ03001 7570 aaKnown RBP8.23□□□□□ -1.09
CASC3-207ENST00000581849 SMIM26A0A096LP01 95 aa8.15□□□□□ -1.1
CASC3-207ENST00000581849 A0A1B0GU69 56 aa8.14□□□□□ -1.11
CASC3-207ENST00000581849 MT1GP13640 62 aa8.13□□□□□ -1.11
CASC3-207ENST00000581849 KRTAP19-5Q3LI72 72 aa8.13□□□□□ -1.11
CASC3-207ENST00000581849 PP632Q6XCG6 107 aa8.07□□□□□ -1.12
CASC3-207ENST00000581849 TMEM258P61165 79 aa8.03□□□□□ -1.12
CASC3-207ENST00000581849 GPR98Q8WXG9 6306 aa8.03□□□□□ -1.12
CASC3-207ENST00000581849 ATP5EP56381 51 aaPredicted RBP8.02□□□□□ -1.13
CASC3-207ENST00000581849 A8MU10 97 aa7.99□□□□□ -1.13
CASC3-207ENST00000581849 PCP4P48539 62 aa7.99□□□□□ -1.13
CASC3-207ENST00000581849 KRTAP4-9Q9BYQ8 210 aa7.98□□□□□ -1.13
CASC3-207ENST00000581849 MT1MQ8N339 61 aa7.95□□□□□ -1.14
CASC3-207ENST00000581849 TNP1P09430 55 aa7.94□□□□□ -1.14
CASC3-207ENST00000581849 MT1LQ93083 61 aa7.94□□□□□ -1.14
CASC3-207ENST00000581849 LCE3AQ5TA76 89 aa7.89□□□□□ -1.15
CASC3-207ENST00000581849 C10orf95Q9H7T3 257 aa7.89□□□□□ -1.15
CASC3-207ENST00000581849 PRR15LQ9BU68 103 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 9.5 ms