RNA–Protein interactions for RNA: ENST00000581707.1

SREBF1-220, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 2

Gene SREBF1, Length 695 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-220ENST00000581707 KLKP1Q107X0 134 aa8.78□□□□□ -1
SREBF1-220ENST00000581707 LINC00208Q96KT6 92 aa8.76□□□□□ -1.01
SREBF1-220ENST00000581707 Q5VV11 94 aa8.74□□□□□ -1.01
SREBF1-220ENST00000581707 OCR1Q9BZK8 76 aa8.73□□□□□ -1.01
SREBF1-220ENST00000581707 NDUFC1O43677 76 aa8.72□□□□□ -1.01
SREBF1-220ENST00000581707 MT1BP07438 61 aa8.72□□□□□ -1.01
SREBF1-220ENST00000581707 KRTAP19-8Q3LI54 63 aa8.72□□□□□ -1.01
SREBF1-220ENST00000581707 J3QR89 54 aa8.71□□□□□ -1.02
SREBF1-220ENST00000581707 MP68P56378 58 aa8.71□□□□□ -1.02
SREBF1-220ENST00000581707 A8MUN3 132 aa8.7□□□□□ -1.02
SREBF1-220ENST00000581707 IMUPQ9GZP8 106 aa8.7□□□□□ -1.02
SREBF1-220ENST00000581707 SYNE2Q8WXH0 6885 aaKnown RBP8.7□□□□□ -1.02
SREBF1-220ENST00000581707 CRIPTQ9P021 101 aa8.66□□□□□ -1.02
SREBF1-220ENST00000581707 A6NN06 94 aa8.63□□□□□ -1.03
SREBF1-220ENST00000581707 H0YAA0 97 aa8.62□□□□□ -1.03
SREBF1-220ENST00000581707 H3BPC8 53 aa8.58□□□□□ -1.04
SREBF1-220ENST00000581707 SCGB1A1P11684 91 aa8.58□□□□□ -1.04
SREBF1-220ENST00000581707 KRTAP6-3Q3LI67 103 aa8.55□□□□□ -1.04
SREBF1-220ENST00000581707 ADM2Q7Z4H4 148 aa8.54□□□□□ -1.04
SREBF1-220ENST00000581707 KRTAP10-5P60370 271 aa8.53□□□□□ -1.04
SREBF1-220ENST00000581707 DMAC1Q96GE9 116 aa8.46□□□□□ -1.06
SREBF1-220ENST00000581707 MT-ATP8P03928 68 aa8.4□□□□□ -1.06
SREBF1-220ENST00000581707 K7ERU9 68 aa8.39□□□□□ -1.07
SREBF1-220ENST00000581707 P0C880 135 aa8.34□□□□□ -1.07
SREBF1-220ENST00000581707 C20orf197Q8N268 126 aa8.34□□□□□ -1.07
SREBF1-220ENST00000581707 SMIM20Q8N5G0 67 aa8.34□□□□□ -1.07
SREBF1-220ENST00000581707 TRAV7A0A075B6U4 112 aa8.33□□□□□ -1.08
SREBF1-220ENST00000581707 R4GN34 69 aa8.32□□□□□ -1.08
SREBF1-220ENST00000581707 ACYP2P14621 99 aa8.28□□□□□ -1.08
SREBF1-220ENST00000581707 PLAC4Q8WY50 150 aa8.27□□□□□ -1.09
SREBF1-220ENST00000581707 KRTAP3-2Q9BYR7 98 aa8.27□□□□□ -1.09
SREBF1-220ENST00000581707 M0QZ58 72 aa8.25□□□□□ -1.09
SREBF1-220ENST00000581707 PRO2289Q9P1D8 64 aa8.23□□□□□ -1.09
SREBF1-220ENST00000581707 MT1XP80297 61 aa8.19□□□□□ -1.1
SREBF1-220ENST00000581707 SPTSSBQ8NFR3 76 aa8.18□□□□□ -1.1
SREBF1-220ENST00000581707 KRTAP5-9P26371 169 aa8.16□□□□□ -1.1
SREBF1-220ENST00000581707 SNURFQ9Y675 71 aa8.16□□□□□ -1.1
SREBF1-220ENST00000581707 NEBP20929 6669 aa8.15□□□□□ -1.11
SREBF1-220ENST00000581707 MUC12Q9UKN1 5478 aa8.14□□□□□ -1.11
SREBF1-220ENST00000581707 LINC01554Q52M75 96 aa8.14□□□□□ -1.11
SREBF1-220ENST00000581707 CHKB-CPT1BH3BT56 60 aa8.12□□□□□ -1.11
SREBF1-220ENST00000581707 SERP2Q8N6R1 65 aa8.05□□□□□ -1.12
SREBF1-220ENST00000581707 SPANXA2-OT1Q8N9U9 137 aa8.05□□□□□ -1.12
SREBF1-220ENST00000581707 KMT2DO14686 5537 aa8.04□□□□□ -1.12
SREBF1-220ENST00000581707 KRTAP12-2P59991 146 aa7.99□□□□□ -1.13
SREBF1-220ENST00000581707 MDN1Q9NU22 5596 aa7.95□□□□□ -1.14
SREBF1-220ENST00000581707 SPRR2FQ96RM1 72 aa7.94□□□□□ -1.14
SREBF1-220ENST00000581707 KRTAP8-1Q8IUC2 63 aa7.92□□□□□ -1.14
SREBF1-220ENST00000581707 KRTAP20-1Q3LI63 56 aa7.9□□□□□ -1.14
SREBF1-220ENST00000581707 KRTAP4-8A0A0G2JLE6 195 aa7.83□□□□□ -1.16
SREBF1-220ENST00000581707 KRTAP4-8Q9BYQ9 185 aa7.83□□□□□ -1.16
SREBF1-220ENST00000581707 SPRR2EP22531 72 aa7.82□□□□□ -1.16
SREBF1-220ENST00000581707 SPRR2BP35325 72 aa7.82□□□□□ -1.16
SREBF1-220ENST00000581707 SPRR2AP35326 72 aa7.82□□□□□ -1.16
SREBF1-220ENST00000581707 KRTAP10-7P60409 375 aaPredicted RBP7.82□□□□□ -1.16
SREBF1-220ENST00000581707 COA5Q86WW8 74 aa7.82□□□□□ -1.16
SREBF1-220ENST00000581707 COX7CP15954 63 aa7.8□□□□□ -1.16
SREBF1-220ENST00000581707 KRTAP13-4Q3LI77 160 aa7.8□□□□□ -1.16
SREBF1-220ENST00000581707 KRTAP10-12P60413 245 aa7.78□□□□□ -1.16
SREBF1-220ENST00000581707 KRTAP2-3P0C7H8 128 aa7.72□□□□□ -1.17
SREBF1-220ENST00000581707 LCE1AQ5T7P2 110 aa7.72□□□□□ -1.17
SREBF1-220ENST00000581707 KRTAP2-4Q9BYR9 128 aa7.72□□□□□ -1.17
SREBF1-220ENST00000581707 SEC61GP60059 68 aa7.71□□□□□ -1.18
SREBF1-220ENST00000581707 H7BZZ5 65 aa7.68□□□□□ -1.18
SREBF1-220ENST00000581707 SERP1Q9Y6X1 66 aa7.68□□□□□ -1.18
SREBF1-220ENST00000581707 CYSTM1Q9H1C7 97 aa7.67□□□□□ -1.18
SREBF1-220ENST00000581707 CAMK2N1Q7Z7J9 78 aa7.66□□□□□ -1.18
SREBF1-220ENST00000581707 A0A0D9SG42 100 aa7.58□□□□□ -1.2
SREBF1-220ENST00000581707 A0A1B0GU33 70 aa7.57□□□□□ -1.2
SREBF1-220ENST00000581707 SPATA8Q6RVD6 105 aa7.56□□□□□ -1.2
SREBF1-220ENST00000581707 SPRR2DP22532 72 aa7.55□□□□□ -1.2
SREBF1-220ENST00000581707 ANAPC13Q9BS18 74 aa7.54□□□□□ -1.2
SREBF1-220ENST00000581707 SPINT4Q6UDR6 99 aa7.47□□□□□ -1.21
SREBF1-220ENST00000581707 KRTAP2-2Q9BYT5 123 aa7.47□□□□□ -1.21
SREBF1-220ENST00000581707 KRTAP2-1Q9BYU5 128 aa7.47□□□□□ -1.21
SREBF1-220ENST00000581707 A0A1B0GU69 56 aa7.44□□□□□ -1.22
SREBF1-220ENST00000581707 KRTAP12-1P59990 96 aa7.41□□□□□ -1.22
SREBF1-220ENST00000581707 CCDC179H3BU77 68 aa7.38□□□□□ -1.23
SREBF1-220ENST00000581707 SMIM26A0A096LP01 95 aa7.35□□□□□ -1.23
SREBF1-220ENST00000581707 LCE3BQ5TA77 95 aa7.35□□□□□ -1.23
SREBF1-220ENST00000581707 KRTAP19-7Q3SYF9 63 aa7.32□□□□□ -1.24
SREBF1-220ENST00000581707 ATP5EP56381 51 aaPredicted RBP7.29□□□□□ -1.24
SREBF1-220ENST00000581707 A8MU10 97 aa7.28□□□□□ -1.24
SREBF1-220ENST00000581707 MT1EP04732 61 aa7.25□□□□□ -1.25
SREBF1-220ENST00000581707 PRR15LQ9BU68 103 aa7.22□□□□□ -1.25
SREBF1-220ENST00000581707 LCE5AQ5TCM9 118 aa7.21□□□□□ -1.26
SREBF1-220ENST00000581707 KRTAP19-3Q7Z4W3 81 aa7.19□□□□□ -1.26
SREBF1-220ENST00000581707 KRTAP19-5Q3LI72 72 aa7.15□□□□□ -1.26
SREBF1-220ENST00000581707 LINC01558Q9Y6Z2 57 aa7.15□□□□□ -1.26
SREBF1-220ENST00000581707 TMEM258P61165 79 aa7.1□□□□□ -1.27
SREBF1-220ENST00000581707 C10orf95Q9H7T3 257 aa7.09□□□□□ -1.27
SREBF1-220ENST00000581707 DSTQ03001 7570 aaKnown RBP7.08□□□□□ -1.28
SREBF1-220ENST00000581707 TNP1P09430 55 aa7.07□□□□□ -1.28
SREBF1-220ENST00000581707 MT1GP13640 62 aa7.04□□□□□ -1.28
SREBF1-220ENST00000581707 LCE3AQ5TA76 89 aa7□□□□□ -1.29
SREBF1-220ENST00000581707 UQCR11O14957 56 aa6.98□□□□□ -1.29
SREBF1-220ENST00000581707 PP632Q6XCG6 107 aa6.98□□□□□ -1.29
SREBF1-220ENST00000581707 MT1LQ93083 61 aa6.94□□□□□ -1.3
SREBF1-220ENST00000581707 MT1MQ8N339 61 aa6.91□□□□□ -1.3
SREBF1-220ENST00000581707 MIR22HGQ0VDD5 57 aa6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms