RNA–Protein interactions for RNA: ENST00000581265.1

RFFL-209, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

TSL 4

Gene RFFL, Length 596 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-209ENST00000581265 TP53AIP1Q9HCN2 124 aa4.64□□□□□ -1.67
RFFL-209ENST00000581265 CRIPTQ9P021 101 aa4.63□□□□□ -1.67
RFFL-209ENST00000581265 SPRR2FQ96RM1 72 aa4.61□□□□□ -1.67
RFFL-209ENST00000581265 SPCS1Q9Y6A9 102 aa4.6□□□□□ -1.67
RFFL-209ENST00000581265 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
RFFL-209ENST00000581265 KRTAP4-6Q9BYQ5 205 aa4.59□□□□□ -1.67
RFFL-209ENST00000581265 IMUPQ9GZP8 106 aa4.59□□□□□ -1.67
RFFL-209ENST00000581265 CYP4F30PQ9H0H9 118 aa4.58□□□□□ -1.68
RFFL-209ENST00000581265 GPR98Q8WXG9 6306 aa4.58□□□□□ -1.68
RFFL-209ENST00000581265 A0A087WVE0 104 aa4.56□□□□□ -1.68
RFFL-209ENST00000581265 PRO0461Q9UI25 63 aa4.56□□□□□ -1.68
RFFL-209ENST00000581265 LOC105371267A0A1B0GV96 52 aa4.54□□□□□ -1.68
RFFL-209ENST00000581265 H3BS24 57 aa4.54□□□□□ -1.68
RFFL-209ENST00000581265 SPRR2DP22532 72 aa4.53□□□□□ -1.68
RFFL-209ENST00000581265 H0YAA0 97 aa4.52□□□□□ -1.69
RFFL-209ENST00000581265 LOC101927531A0A1B0GV80 90 aa4.5□□□□□ -1.69
RFFL-209ENST00000581265 TRAV22A0A0B4J277 110 aa4.49□□□□□ -1.69
RFFL-209ENST00000581265 NDUFC1O43677 76 aa4.49□□□□□ -1.69
RFFL-209ENST00000581265 K7EP34 96 aa4.48□□□□□ -1.69
RFFL-209ENST00000581265 PRO2289Q9P1D8 64 aa4.48□□□□□ -1.69
RFFL-209ENST00000581265 LCE1AQ5T7P2 110 aa4.47□□□□□ -1.69
RFFL-209ENST00000581265 MT1XP80297 61 aa4.46□□□□□ -1.7
RFFL-209ENST00000581265 COL5A1-AS1Q5SY13 56 aa4.46□□□□□ -1.7
RFFL-209ENST00000581265 A8MUN3 132 aa4.44□□□□□ -1.7
RFFL-209ENST00000581265 ADM2Q7Z4H4 148 aa4.44□□□□□ -1.7
RFFL-209ENST00000581265 KRTAP8-1Q8IUC2 63 aa4.44□□□□□ -1.7
RFFL-209ENST00000581265 LCE3BQ5TA77 95 aa4.43□□□□□ -1.7
RFFL-209ENST00000581265 F8W1H4 67 aa4.42□□□□□ -1.7
RFFL-209ENST00000581265 ETDBQ3ZM63 59 aa4.42□□□□□ -1.7
RFFL-209ENST00000581265 UQCRQO14949 82 aa4.41□□□□□ -1.7
RFFL-209ENST00000581265 ACYP1P07311 99 aa4.41□□□□□ -1.7
RFFL-209ENST00000581265 PLAC4Q8WY50 150 aa4.41□□□□□ -1.7
RFFL-209ENST00000581265 ATOX1O00244 68 aa4.4□□□□□ -1.71
RFFL-209ENST00000581265 KRTAP12-2P59991 146 aa4.4□□□□□ -1.71
RFFL-209ENST00000581265 GTF2H5Q6ZYL4 71 aa4.4□□□□□ -1.71
RFFL-209ENST00000581265 H0Y9P7 68 aa4.38□□□□□ -1.71
RFFL-209ENST00000581265 PCP4P48539 62 aa4.35□□□□□ -1.71
RFFL-209ENST00000581265 ATP5EP2Q5VTU8 51 aa4.34□□□□□ -1.71
RFFL-209ENST00000581265 R4GN34 69 aa4.34□□□□□ -1.71
RFFL-209ENST00000581265 KRTAP4-8A0A0G2JLE6 195 aa4.33□□□□□ -1.72
RFFL-209ENST00000581265 HIST1H4AP62805 103 aaKnown RBP4.33□□□□□ -1.72
RFFL-209ENST00000581265 KRTAP4-8Q9BYQ9 185 aa4.33□□□□□ -1.72
RFFL-209ENST00000581265 P0C880 135 aa4.32□□□□□ -1.72
RFFL-209ENST00000581265 FAM240AA0A1B0GVK7 77 aa4.31□□□□□ -1.72
RFFL-209ENST00000581265 C20orf197Q8N268 126 aa4.31□□□□□ -1.72
RFFL-209ENST00000581265 LINC00208Q96KT6 92 aa4.31□□□□□ -1.72
RFFL-209ENST00000581265 M0QZ58 72 aa4.28□□□□□ -1.72
RFFL-209ENST00000581265 PCP4L1A6NKN8 68 aa4.27□□□□□ -1.73
RFFL-209ENST00000581265 MP68P56378 58 aa4.26□□□□□ -1.73
RFFL-209ENST00000581265 KRTAP4-9Q9BYQ8 210 aa4.26□□□□□ -1.73
RFFL-209ENST00000581265 OCR1Q9BZK8 76 aa4.25□□□□□ -1.73
RFFL-209ENST00000581265 KRTAP10-7P60409 375 aaPredicted RBP4.24□□□□□ -1.73
RFFL-209ENST00000581265 KRTAP10-12P60413 245 aa4.24□□□□□ -1.73
RFFL-209ENST00000581265 LINC01554Q52M75 96 aa4.23□□□□□ -1.73
RFFL-209ENST00000581265 LINC00643Q86TS7 51 aa4.23□□□□□ -1.73
RFFL-209ENST00000581265 DMAC1Q96GE9 116 aa4.21□□□□□ -1.74
RFFL-209ENST00000581265 H3BPC8 53 aa4.18□□□□□ -1.74
RFFL-209ENST00000581265 DSTQ03001 7570 aaKnown RBP4.15□□□□□ -1.74
RFFL-209ENST00000581265 TRAV7A0A075B6U4 112 aa4.13□□□□□ -1.75
RFFL-209ENST00000581265 A0A0A0MQY5 61 aa4.13□□□□□ -1.75
RFFL-209ENST00000581265 MT-ATP8P03928 68 aa4.11□□□□□ -1.75
RFFL-209ENST00000581265 KRTAP4-12Q9BQ66 201 aa4.1□□□□□ -1.75
RFFL-209ENST00000581265 ACYP2P14621 99 aa4.08□□□□□ -1.76
RFFL-209ENST00000581265 LCE1DQ5T752 114 aa4.07□□□□□ -1.76
RFFL-209ENST00000581265 SCGB1A1P11684 91 aa4.06□□□□□ -1.76
RFFL-209ENST00000581265 SPTSSBQ8NFR3 76 aa4.05□□□□□ -1.76
RFFL-209ENST00000581265 A0A1B0GV90 55 aa4.04□□□□□ -1.76
RFFL-209ENST00000581265 LCE5AQ5TCM9 118 aa4.02□□□□□ -1.77
RFFL-209ENST00000581265 HMCN1Q96RW7 5635 aa4.01□□□□□ -1.77
RFFL-209ENST00000581265 MT4P47944 62 aa4.01□□□□□ -1.77
RFFL-209ENST00000581265 KRTAP5-10Q6L8G5 202 aa4.01□□□□□ -1.77
RFFL-209ENST00000581265 KRTAP19-7Q3SYF9 63 aa3.99□□□□□ -1.77
RFFL-209ENST00000581265 AHNAK2Q8IVF2 5795 aa3.99□□□□□ -1.77
RFFL-209ENST00000581265 CHKB-CPT1BH3BT56 60 aa3.97□□□□□ -1.77
RFFL-209ENST00000581265 KRTAP19-3Q7Z4W3 81 aa3.97□□□□□ -1.77
RFFL-209ENST00000581265 J3QR89 54 aa3.96□□□□□ -1.78
RFFL-209ENST00000581265 MT1EP04732 61 aa3.96□□□□□ -1.78
RFFL-209ENST00000581265 CAMK2N1Q7Z7J9 78 aa3.96□□□□□ -1.78
RFFL-209ENST00000581265 KRTAP9-9Q9BYP9 154 aa3.96□□□□□ -1.78
RFFL-209ENST00000581265 KRTAP9-4Q9BYQ2 154 aa3.96□□□□□ -1.78
RFFL-209ENST00000581265 SPRR5A0A1B0GTR4 108 aa3.95□□□□□ -1.78
RFFL-209ENST00000581265 KRTAP13-4Q3LI77 160 aa3.95□□□□□ -1.78
RFFL-209ENST00000581265 LCE4AQ5TA78 99 aa3.95□□□□□ -1.78
RFFL-209ENST00000581265 KRTAP5-7Q6L8G8 165 aa3.94□□□□□ -1.78
RFFL-209ENST00000581265 SMIM20Q8N5G0 67 aa3.92□□□□□ -1.78
RFFL-209ENST00000581265 KRTAP19-4Q3LI73 84 aa3.89□□□□□ -1.79
RFFL-209ENST00000581265 SEC61GP60059 68 aa3.88□□□□□ -1.79
RFFL-209ENST00000581265 CYSTM1Q9H1C7 97 aa3.88□□□□□ -1.79
RFFL-209ENST00000581265 MT1GP13640 62 aa3.87□□□□□ -1.79
RFFL-209ENST00000581265 SPANXA2-OT1Q8N9U9 137 aa3.86□□□□□ -1.79
RFFL-209ENST00000581265 SNURFQ9Y675 71 aa3.85□□□□□ -1.79
RFFL-209ENST00000581265 A0A0D9SG42 100 aa3.84□□□□□ -1.79
RFFL-209ENST00000581265 KRTAP23-1A1A580 65 aa3.84□□□□□ -1.79
RFFL-209ENST00000581265 KRTAP19-5Q3LI72 72 aa3.83□□□□□ -1.8
RFFL-209ENST00000581265 KRTAP5-3Q6L8H2 238 aa3.82□□□□□ -1.8
RFFL-209ENST00000581265 PP632Q6XCG6 107 aa3.82□□□□□ -1.8
RFFL-209ENST00000581265 MT1MQ8N339 61 aa3.78□□□□□ -1.8
RFFL-209ENST00000581265 SPINT4Q6UDR6 99 aa3.76□□□□□ -1.81
RFFL-209ENST00000581265 SPATA8Q6RVD6 105 aa3.75□□□□□ -1.81
RFFL-209ENST00000581265 MT1LQ93083 61 aa3.75□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms