RNA–Protein interactions for RNA: ENST00000580540.1

SREBF1-219, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 540 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-219ENST00000580540 MP68P56378 58 aa7.51□□□□□ -1.21
SREBF1-219ENST00000580540 KLKP1Q107X0 134 aa7.49□□□□□ -1.21
SREBF1-219ENST00000580540 OCR1Q9BZK8 76 aa7.49□□□□□ -1.21
SREBF1-219ENST00000580540 NDUFC1O43677 76 aa7.48□□□□□ -1.21
SREBF1-219ENST00000580540 Q5VV11 94 aa7.46□□□□□ -1.22
SREBF1-219ENST00000580540 SPRR2GQ9BYE4 73 aa7.46□□□□□ -1.22
SREBF1-219ENST00000580540 MACF1Q9UPN3 7388 aaKnown RBP7.46□□□□□ -1.22
SREBF1-219ENST00000580540 A8MUN3 132 aa7.44□□□□□ -1.22
SREBF1-219ENST00000580540 IMUPQ9GZP8 106 aa7.44□□□□□ -1.22
SREBF1-219ENST00000580540 MT1BP07438 61 aa7.42□□□□□ -1.22
SREBF1-219ENST00000580540 SCGB1A1P11684 91 aa7.42□□□□□ -1.22
SREBF1-219ENST00000580540 KRTAP19-8Q3LI54 63 aa7.41□□□□□ -1.22
SREBF1-219ENST00000580540 SYNE2Q8WXH0 6885 aaKnown RBP7.41□□□□□ -1.22
SREBF1-219ENST00000580540 A6NN06 94 aa7.37□□□□□ -1.23
SREBF1-219ENST00000580540 CRIPTQ9P021 101 aa7.37□□□□□ -1.23
SREBF1-219ENST00000580540 H3BPC8 53 aa7.35□□□□□ -1.23
SREBF1-219ENST00000580540 ADM2Q7Z4H4 148 aa7.33□□□□□ -1.24
SREBF1-219ENST00000580540 H0YAA0 97 aa7.32□□□□□ -1.24
SREBF1-219ENST00000580540 MT-ATP8P03928 68 aa7.26□□□□□ -1.25
SREBF1-219ENST00000580540 KRTAP10-5P60370 271 aa7.25□□□□□ -1.25
SREBF1-219ENST00000580540 K7ERU9 68 aa7.24□□□□□ -1.25
SREBF1-219ENST00000580540 KRTAP6-3Q3LI67 103 aa7.24□□□□□ -1.25
SREBF1-219ENST00000580540 DMAC1Q96GE9 116 aa7.24□□□□□ -1.25
SREBF1-219ENST00000580540 TRAV7A0A075B6U4 112 aa7.17□□□□□ -1.26
SREBF1-219ENST00000580540 SMIM20Q8N5G0 67 aa7.17□□□□□ -1.26
SREBF1-219ENST00000580540 P0C880 135 aa7.15□□□□□ -1.26
SREBF1-219ENST00000580540 C20orf197Q8N268 126 aa7.14□□□□□ -1.27
SREBF1-219ENST00000580540 R4GN34 69 aa7.13□□□□□ -1.27
SREBF1-219ENST00000580540 ACYP2P14621 99 aa7.12□□□□□ -1.27
SREBF1-219ENST00000580540 M0QZ58 72 aa7.09□□□□□ -1.27
SREBF1-219ENST00000580540 PLAC4Q8WY50 150 aa7.09□□□□□ -1.27
SREBF1-219ENST00000580540 SNURFQ9Y675 71 aa7.07□□□□□ -1.28
SREBF1-219ENST00000580540 KRTAP3-2Q9BYR7 98 aa7.06□□□□□ -1.28
SREBF1-219ENST00000580540 CHKB-CPT1BH3BT56 60 aa7.03□□□□□ -1.28
SREBF1-219ENST00000580540 LINC01554Q52M75 96 aa7.03□□□□□ -1.28
SREBF1-219ENST00000580540 SPTSSBQ8NFR3 76 aa7.03□□□□□ -1.28
SREBF1-219ENST00000580540 PRO2289Q9P1D8 64 aa7.02□□□□□ -1.29
SREBF1-219ENST00000580540 MUC12Q9UKN1 5478 aa6.99□□□□□ -1.29
SREBF1-219ENST00000580540 MT1XP80297 61 aa6.97□□□□□ -1.29
SREBF1-219ENST00000580540 NEBP20929 6669 aa6.96□□□□□ -1.29
SREBF1-219ENST00000580540 SERP2Q8N6R1 65 aa6.94□□□□□ -1.3
SREBF1-219ENST00000580540 SPANXA2-OT1Q8N9U9 137 aa6.9□□□□□ -1.3
SREBF1-219ENST00000580540 KRTAP5-9P26371 169 aa6.89□□□□□ -1.31
SREBF1-219ENST00000580540 KMT2DO14686 5537 aa6.88□□□□□ -1.31
SREBF1-219ENST00000580540 MDN1Q9NU22 5596 aa6.81□□□□□ -1.32
SREBF1-219ENST00000580540 SPRR2FQ96RM1 72 aa6.79□□□□□ -1.32
SREBF1-219ENST00000580540 PCP4P48539 62 aa6.77□□□□□ -1.33
SREBF1-219ENST00000580540 KRTAP12-2P59991 146 aa6.77□□□□□ -1.33
SREBF1-219ENST00000580540 KRTAP8-1Q8IUC2 63 aa6.77□□□□□ -1.33
SREBF1-219ENST00000580540 COA5Q86WW8 74 aa6.75□□□□□ -1.33
SREBF1-219ENST00000580540 COX7CP15954 63 aa6.73□□□□□ -1.33
SREBF1-219ENST00000580540 KRTAP20-1Q3LI63 56 aa6.71□□□□□ -1.34
SREBF1-219ENST00000580540 KRTAP4-8A0A0G2JLE6 195 aa6.69□□□□□ -1.34
SREBF1-219ENST00000580540 KRTAP13-4Q3LI77 160 aa6.69□□□□□ -1.34
SREBF1-219ENST00000580540 KRTAP4-8Q9BYQ9 185 aa6.69□□□□□ -1.34
SREBF1-219ENST00000580540 KRTAP10-7P60409 375 aaPredicted RBP6.68□□□□□ -1.34
SREBF1-219ENST00000580540 SPRR2EP22531 72 aa6.67□□□□□ -1.34
SREBF1-219ENST00000580540 SPRR2BP35325 72 aa6.67□□□□□ -1.34
SREBF1-219ENST00000580540 SPRR2AP35326 72 aa6.67□□□□□ -1.34
SREBF1-219ENST00000580540 SEC61GP60059 68 aa6.65□□□□□ -1.34
SREBF1-219ENST00000580540 SERP1Q9Y6X1 66 aa6.64□□□□□ -1.35
SREBF1-219ENST00000580540 CYSTM1Q9H1C7 97 aa6.63□□□□□ -1.35
SREBF1-219ENST00000580540 H7BZZ5 65 aa6.61□□□□□ -1.35
SREBF1-219ENST00000580540 KRTAP10-12P60413 245 aa6.61□□□□□ -1.35
SREBF1-219ENST00000580540 CAMK2N1Q7Z7J9 78 aa6.6□□□□□ -1.35
SREBF1-219ENST00000580540 A0A0D9SG42 100 aa6.56□□□□□ -1.36
SREBF1-219ENST00000580540 KRTAP2-3P0C7H8 128 aa6.54□□□□□ -1.36
SREBF1-219ENST00000580540 LCE1AQ5T7P2 110 aa6.54□□□□□ -1.36
SREBF1-219ENST00000580540 ANAPC13Q9BS18 74 aa6.54□□□□□ -1.36
SREBF1-219ENST00000580540 KRTAP2-4Q9BYR9 128 aa6.54□□□□□ -1.36
SREBF1-219ENST00000580540 SPATA8Q6RVD6 105 aa6.52□□□□□ -1.37
SREBF1-219ENST00000580540 A0A1B0GU33 70 aa6.51□□□□□ -1.37
SREBF1-219ENST00000580540 SPINT4Q6UDR6 99 aa6.46□□□□□ -1.38
SREBF1-219ENST00000580540 SPRR2DP22532 72 aa6.45□□□□□ -1.38
SREBF1-219ENST00000580540 A0A1B0GU69 56 aa6.42□□□□□ -1.38
SREBF1-219ENST00000580540 CCDC179H3BU77 68 aa6.41□□□□□ -1.38
SREBF1-219ENST00000580540 KRTAP12-1P59990 96 aa6.35□□□□□ -1.39
SREBF1-219ENST00000580540 KRTAP2-2Q9BYT5 123 aa6.34□□□□□ -1.39
SREBF1-219ENST00000580540 KRTAP2-1Q9BYU5 128 aa6.34□□□□□ -1.39
SREBF1-219ENST00000580540 SMIM26A0A096LP01 95 aa6.32□□□□□ -1.4
SREBF1-219ENST00000580540 A8MU10 97 aa6.29□□□□□ -1.4
SREBF1-219ENST00000580540 ATP5EP56381 51 aaPredicted RBP6.28□□□□□ -1.4
SREBF1-219ENST00000580540 SVIPQ8NHG7 77 aa6.28□□□□□ -1.4
SREBF1-219ENST00000580540 LCE3BQ5TA77 95 aa6.26□□□□□ -1.41
SREBF1-219ENST00000580540 PRR15LQ9BU68 103 aa6.24□□□□□ -1.41
SREBF1-219ENST00000580540 KRTAP19-7Q3SYF9 63 aa6.22□□□□□ -1.41
SREBF1-219ENST00000580540 MT1EP04732 61 aa6.18□□□□□ -1.42
SREBF1-219ENST00000580540 LINC01558Q9Y6Z2 57 aa6.15□□□□□ -1.42
SREBF1-219ENST00000580540 TMEM258P61165 79 aa6.13□□□□□ -1.43
SREBF1-219ENST00000580540 KRTAP19-5Q3LI72 72 aa6.12□□□□□ -1.43
SREBF1-219ENST00000580540 KRTAP19-3Q7Z4W3 81 aa6.12□□□□□ -1.43
SREBF1-219ENST00000580540 LCE5AQ5TCM9 118 aa6.11□□□□□ -1.43
SREBF1-219ENST00000580540 C10orf95Q9H7T3 257 aa6.08□□□□□ -1.44
SREBF1-219ENST00000580540 TNP1P09430 55 aa6.07□□□□□ -1.44
SREBF1-219ENST00000580540 UQCR11O14957 56 aa6.01□□□□□ -1.45
SREBF1-219ENST00000580540 LCE3AQ5TA76 89 aa6.01□□□□□ -1.45
SREBF1-219ENST00000580540 MT1GP13640 62 aa5.98□□□□□ -1.45
SREBF1-219ENST00000580540 DSTQ03001 7570 aaKnown RBP5.98□□□□□ -1.45
SREBF1-219ENST00000580540 PP632Q6XCG6 107 aa5.95□□□□□ -1.46
SREBF1-219ENST00000580540 MT1LQ93083 61 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms