RNA–Protein interactions for RNA: ENST00000580419.5

SMARCE1-216, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 1,228 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-216ENST00000580419 FAM236AA0A1B0GUQ0 79 aa6.55□□□□□ -1.36
SMARCE1-216ENST00000580419 FAM236BA0A1B0GV22 79 aa6.55□□□□□ -1.36
SMARCE1-216ENST00000580419 LCA10Q71F78 164 aa6.55□□□□□ -1.36
SMARCE1-216ENST00000580419 F8W1H4 67 aa6.54□□□□□ -1.36
SMARCE1-216ENST00000580419 MT1BP07438 61 aa6.53□□□□□ -1.36
SMARCE1-216ENST00000580419 Q5VV11 94 aa6.53□□□□□ -1.36
SMARCE1-216ENST00000580419 GTF2H5Q6ZYL4 71 aa6.53□□□□□ -1.36
SMARCE1-216ENST00000580419 A6NN06 94 aa6.5□□□□□ -1.37
SMARCE1-216ENST00000580419 KLKP1Q107X0 134 aa6.5□□□□□ -1.37
SMARCE1-216ENST00000580419 CYP4F30PQ9H0H9 118 aa6.5□□□□□ -1.37
SMARCE1-216ENST00000580419 CRIPTQ9P021 101 aa6.5□□□□□ -1.37
SMARCE1-216ENST00000580419 LOC101927531A0A1B0GV80 90 aa6.46□□□□□ -1.38
SMARCE1-216ENST00000580419 KRTAP10-5P60370 271 aa6.45□□□□□ -1.38
SMARCE1-216ENST00000580419 TRAV22A0A0B4J277 110 aa6.44□□□□□ -1.38
SMARCE1-216ENST00000580419 ACYP1P07311 99 aa6.44□□□□□ -1.38
SMARCE1-216ENST00000580419 ETDBQ3ZM63 59 aa6.44□□□□□ -1.38
SMARCE1-216ENST00000580419 NEBP20929 6669 aa6.43□□□□□ -1.38
SMARCE1-216ENST00000580419 H0YAA0 97 aa6.41□□□□□ -1.38
SMARCE1-216ENST00000580419 ATP5EP2Q5VTU8 51 aa6.41□□□□□ -1.38
SMARCE1-216ENST00000580419 FAM240AA0A1B0GVK7 77 aa6.4□□□□□ -1.38
SMARCE1-216ENST00000580419 IMUPQ9GZP8 106 aa6.4□□□□□ -1.38
SMARCE1-216ENST00000580419 MUC12Q9UKN1 5478 aa6.39□□□□□ -1.39
SMARCE1-216ENST00000580419 ATOX1O00244 68 aa6.38□□□□□ -1.39
SMARCE1-216ENST00000580419 UQCRQO14949 82 aa6.37□□□□□ -1.39
SMARCE1-216ENST00000580419 A8MUN3 132 aa6.34□□□□□ -1.39
SMARCE1-216ENST00000580419 KRTAP5-9P26371 169 aa6.34□□□□□ -1.39
SMARCE1-216ENST00000580419 NDUFC1O43677 76 aa6.32□□□□□ -1.4
SMARCE1-216ENST00000580419 A0A087WVE0 104 aa6.3□□□□□ -1.4
SMARCE1-216ENST00000580419 H0Y9P7 68 aa6.27□□□□□ -1.41
SMARCE1-216ENST00000580419 KMT2DO14686 5537 aa6.26□□□□□ -1.41
SMARCE1-216ENST00000580419 HIST1H4AP62805 103 aaKnown RBP6.25□□□□□ -1.41
SMARCE1-216ENST00000580419 LINC00643Q86TS7 51 aa6.23□□□□□ -1.41
SMARCE1-216ENST00000580419 MDN1Q9NU22 5596 aa6.22□□□□□ -1.41
SMARCE1-216ENST00000580419 PCP4L1A6NKN8 68 aa6.19□□□□□ -1.42
SMARCE1-216ENST00000580419 PRO2289Q9P1D8 64 aa6.19□□□□□ -1.42
SMARCE1-216ENST00000580419 OCR1Q9BZK8 76 aa6.17□□□□□ -1.42
SMARCE1-216ENST00000580419 MP68P56378 58 aa6.16□□□□□ -1.42
SMARCE1-216ENST00000580419 KRTAP20-1Q3LI63 56 aa6.16□□□□□ -1.42
SMARCE1-216ENST00000580419 ADM2Q7Z4H4 148 aa6.16□□□□□ -1.42
SMARCE1-216ENST00000580419 LINC00208Q96KT6 92 aa6.16□□□□□ -1.42
SMARCE1-216ENST00000580419 H3BPC8 53 aa6.14□□□□□ -1.43
SMARCE1-216ENST00000580419 C20orf197Q8N268 126 aa6.14□□□□□ -1.43
SMARCE1-216ENST00000580419 MT1XP80297 61 aa6.09□□□□□ -1.43
SMARCE1-216ENST00000580419 PLAC4Q8WY50 150 aa6.09□□□□□ -1.43
SMARCE1-216ENST00000580419 KRTAP12-2P59991 146 aa6.08□□□□□ -1.44
SMARCE1-216ENST00000580419 DMAC1Q96GE9 116 aa6.06□□□□□ -1.44
SMARCE1-216ENST00000580419 R4GN34 69 aa6.06□□□□□ -1.44
SMARCE1-216ENST00000580419 KRTAP2-3P0C7H8 128 aa6.03□□□□□ -1.44
SMARCE1-216ENST00000580419 KRTAP2-4Q9BYR9 128 aa6.03□□□□□ -1.44
SMARCE1-216ENST00000580419 P0C880 135 aa6□□□□□ -1.45
SMARCE1-216ENST00000580419 SPRR2FQ96RM1 72 aa6□□□□□ -1.45
SMARCE1-216ENST00000580419 J3QR89 54 aa5.99□□□□□ -1.45
SMARCE1-216ENST00000580419 TRAV7A0A075B6U4 112 aa5.98□□□□□ -1.45
SMARCE1-216ENST00000580419 M0QZ58 72 aa5.96□□□□□ -1.46
SMARCE1-216ENST00000580419 KRTAP8-1Q8IUC2 63 aa5.96□□□□□ -1.46
SMARCE1-216ENST00000580419 SPRR2EP22531 72 aa5.93□□□□□ -1.46
SMARCE1-216ENST00000580419 SPRR2BP35325 72 aa5.93□□□□□ -1.46
SMARCE1-216ENST00000580419 SPRR2AP35326 72 aa5.93□□□□□ -1.46
SMARCE1-216ENST00000580419 SCGB1A1P11684 91 aa5.92□□□□□ -1.46
SMARCE1-216ENST00000580419 LCE1AQ5T7P2 110 aa5.9□□□□□ -1.46
SMARCE1-216ENST00000580419 ACYP2P14621 99 aa5.89□□□□□ -1.47
SMARCE1-216ENST00000580419 A0A1B0GV90 55 aa5.88□□□□□ -1.47
SMARCE1-216ENST00000580419 SPTSSBQ8NFR3 76 aa5.87□□□□□ -1.47
SMARCE1-216ENST00000580419 SMIM20Q8N5G0 67 aa5.86□□□□□ -1.47
SMARCE1-216ENST00000580419 KRTAP10-12P60413 245 aa5.84□□□□□ -1.47
SMARCE1-216ENST00000580419 KRTAP2-2Q9BYT5 123 aa5.83□□□□□ -1.48
SMARCE1-216ENST00000580419 KRTAP2-1Q9BYU5 128 aa5.83□□□□□ -1.48
SMARCE1-216ENST00000580419 LINC01554Q52M75 96 aa5.82□□□□□ -1.48
SMARCE1-216ENST00000580419 KRTAP10-7P60409 375 aaPredicted RBP5.76□□□□□ -1.49
SMARCE1-216ENST00000580419 MT-ATP8P03928 68 aa5.74□□□□□ -1.49
SMARCE1-216ENST00000580419 SPRR2DP22532 72 aa5.74□□□□□ -1.49
SMARCE1-216ENST00000580419 SPANXA2-OT1Q8N9U9 137 aa5.71□□□□□ -1.5
SMARCE1-216ENST00000580419 CHKB-CPT1BH3BT56 60 aa5.7□□□□□ -1.5
SMARCE1-216ENST00000580419 K7ERU9 68 aa5.67□□□□□ -1.5
SMARCE1-216ENST00000580419 H3BS24 57 aa5.65□□□□□ -1.5
SMARCE1-216ENST00000580419 SNURFQ9Y675 71 aa5.57□□□□□ -1.52
SMARCE1-216ENST00000580419 KRTAP13-4Q3LI77 160 aa5.55□□□□□ -1.52
SMARCE1-216ENST00000580419 SERP2Q8N6R1 65 aa5.54□□□□□ -1.52
SMARCE1-216ENST00000580419 CAMK2N1Q7Z7J9 78 aa5.52□□□□□ -1.53
SMARCE1-216ENST00000580419 DSTQ03001 7570 aaKnown RBP5.47□□□□□ -1.53
SMARCE1-216ENST00000580419 KRTAP19-7Q3SYF9 63 aa5.46□□□□□ -1.54
SMARCE1-216ENST00000580419 SEC61GP60059 68 aa5.44□□□□□ -1.54
SMARCE1-216ENST00000580419 COA5Q86WW8 74 aa5.44□□□□□ -1.54
SMARCE1-216ENST00000580419 KRTAP19-3Q7Z4W3 81 aa5.42□□□□□ -1.54
SMARCE1-216ENST00000580419 SERP1Q9Y6X1 66 aa5.42□□□□□ -1.54
SMARCE1-216ENST00000580419 MT1EP04732 61 aa5.41□□□□□ -1.54
SMARCE1-216ENST00000580419 A0A1B0GU33 70 aa5.35□□□□□ -1.55
SMARCE1-216ENST00000580419 MT1GP13640 62 aa5.32□□□□□ -1.56
SMARCE1-216ENST00000580419 A0A0D9SG42 100 aa5.31□□□□□ -1.56
SMARCE1-216ENST00000580419 COX7CP15954 63 aa5.31□□□□□ -1.56
SMARCE1-216ENST00000580419 KRTAP12-1P59990 96 aa5.3□□□□□ -1.56
SMARCE1-216ENST00000580419 SPATA8Q6RVD6 105 aa5.29□□□□□ -1.56
SMARCE1-216ENST00000580419 H7BZZ5 65 aa5.28□□□□□ -1.56
SMARCE1-216ENST00000580419 GPR98Q8WXG9 6306 aa5.27□□□□□ -1.57
SMARCE1-216ENST00000580419 PP632Q6XCG6 107 aa5.27□□□□□ -1.57
SMARCE1-216ENST00000580419 SPINT4Q6UDR6 99 aa5.26□□□□□ -1.57
SMARCE1-216ENST00000580419 CYSTM1Q9H1C7 97 aa5.26□□□□□ -1.57
SMARCE1-216ENST00000580419 SMIM26A0A096LP01 95 aa5.23□□□□□ -1.57
SMARCE1-216ENST00000580419 KRTAP19-5Q3LI72 72 aa5.23□□□□□ -1.57
SMARCE1-216ENST00000580419 A0A1B0GU69 56 aa5.18□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms