RNA–Protein interactions for RNA: ENST00000578199.5

ERBB2-205, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 2,526 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-205ENST00000578199 UQCR11O14957 56 aa9.27□□□□□ -0.93
ERBB2-205ENST00000578199 MIR22HGQ0VDD5 57 aa9.26□□□□□ -0.93
ERBB2-205ENST00000578199 EPPK1P58107 5090 aaKnown RBP9.23□□□□□ -0.93
ERBB2-205ENST00000578199 CSAG1Q6PB30 78 aa9.21□□□□□ -0.94
ERBB2-205ENST00000578199 COX6B2Q6YFQ2 88 aa9.17□□□□□ -0.94
ERBB2-205ENST00000578199 XP32Q5T750 250 aa9.15□□□□□ -0.94
ERBB2-205ENST00000578199 RPL37P61927 97 aaKnown RBP9.13□□□□□ -0.95
ERBB2-205ENST00000578199 MT1HL1P0DM35 61 aa9.12□□□□□ -0.95
ERBB2-205ENST00000578199 LPAP08519 4548 aa9.12□□□□□ -0.95
ERBB2-205ENST00000578199 H0YAA0 97 aa9.05□□□□□ -0.96
ERBB2-205ENST00000578199 ABCA13Q86UQ4 5058 aa9.03□□□□□ -0.96
ERBB2-205ENST00000578199 LRP2P98164 4655 aa9.03□□□□□ -0.96
ERBB2-205ENST00000578199 A0A1B0GU33 70 aa9.02□□□□□ -0.97
ERBB2-205ENST00000578199 H1FX-AS1Q4G0G2 97 aa8.98□□□□□ -0.97
ERBB2-205ENST00000578199 KRTAP3-3Q9BYR6 98 aa8.98□□□□□ -0.97
ERBB2-205ENST00000578199 KRTAP4-5Q9BYR2 181 aa8.93□□□□□ -0.98
ERBB2-205ENST00000578199 ROMO1P60602 79 aa8.88□□□□□ -0.99
ERBB2-205ENST00000578199 KRTAP25-1Q3LHN0 102 aa8.88□□□□□ -0.99
ERBB2-205ENST00000578199 S4R3F8 94 aa8.88□□□□□ -0.99
ERBB2-205ENST00000578199 KRTAP10-6P60371 365 aaPredicted RBP8.84□□□□□ -0.99
ERBB2-205ENST00000578199 TPRXLQ17RH7 258 aa8.81□□□□□ -1
ERBB2-205ENST00000578199 KRTAP3-2Q9BYR7 98 aa8.79□□□□□ -1
ERBB2-205ENST00000578199 KRTAP13-4Q3LI77 160 aa8.77□□□□□ -1.01
ERBB2-205ENST00000578199 P0C880 135 aa8.73□□□□□ -1.01
ERBB2-205ENST00000578199 A0A0D9SG42 100 aa8.7□□□□□ -1.02
ERBB2-205ENST00000578199 HERC2O95714 4834 aa8.65□□□□□ -1.03
ERBB2-205ENST00000578199 K7ERS5 55 aa8.61□□□□□ -1.03
ERBB2-205ENST00000578199 MUC17Q685J3 4493 aa8.6□□□□□ -1.03
ERBB2-205ENST00000578199 CRIPTQ9P021 101 aa8.6□□□□□ -1.03
ERBB2-205ENST00000578199 J3QL48 77 aa8.55□□□□□ -1.04
ERBB2-205ENST00000578199 KRTAP4-1Q9BYQ7 146 aa8.51□□□□□ -1.05
ERBB2-205ENST00000578199 SEC61BP60468 96 aaKnown RBP8.48□□□□□ -1.05
ERBB2-205ENST00000578199 MUC2Q02817 5179 aa8.48□□□□□ -1.05
ERBB2-205ENST00000578199 KRTAP12-2P59991 146 aa8.46□□□□□ -1.06
ERBB2-205ENST00000578199 SPINT4Q6UDR6 99 aa8.4□□□□□ -1.06
ERBB2-205ENST00000578199 BIRC6Q9NR09 4857 aa8.39□□□□□ -1.07
ERBB2-205ENST00000578199 KRTAP12-1P59990 96 aa8.37□□□□□ -1.07
ERBB2-205ENST00000578199 M0QZ58 72 aa8.33□□□□□ -1.08
ERBB2-205ENST00000578199 HERC1Q15751 4861 aa8.33□□□□□ -1.08
ERBB2-205ENST00000578199 PCLOQ9Y6V0 5065 aa8.3□□□□□ -1.08
ERBB2-205ENST00000578199 NDUFAF8A1L188 74 aa8.29□□□□□ -1.08
ERBB2-205ENST00000578199 LORP23490 312 aaPredicted RBP8.29□□□□□ -1.08
ERBB2-205ENST00000578199 KRTAP19-2Q3LHN2 52 aa8.28□□□□□ -1.08
ERBB2-205ENST00000578199 KRTAP15-1Q3LI76 137 aa8.26□□□□□ -1.09
ERBB2-205ENST00000578199 C10orf95Q9H7T3 257 aa8.25□□□□□ -1.09
ERBB2-205ENST00000578199 R4GN34 69 aa8.25□□□□□ -1.09
ERBB2-205ENST00000578199 A0A0A0MQY5 61 aa8.21□□□□□ -1.1
ERBB2-205ENST00000578199 HMCN2Q8NDA2 5059 aa8.16□□□□□ -1.1
ERBB2-205ENST00000578199 FLGP20930 4061 aaPredicted RBP8.11□□□□□ -1.11
ERBB2-205ENST00000578199 FAT4Q6V0I7 4981 aa8.05□□□□□ -1.12
ERBB2-205ENST00000578199 RNF213Q63HN8 5207 aa7.94□□□□□ -1.14
ERBB2-205ENST00000578199 UBR4Q5T4S7 5183 aa7.89□□□□□ -1.15
ERBB2-205ENST00000578199 LCE2CQ5TA81 110 aa7.86□□□□□ -1.15
ERBB2-205ENST00000578199 CAMK2N1Q7Z7J9 78 aa7.81□□□□□ -1.16
ERBB2-205ENST00000578199 LUZP6Q538Z0 58 aa7.72□□□□□ -1.17
ERBB2-205ENST00000578199 M0R2T5 61 aa7.7□□□□□ -1.18
ERBB2-205ENST00000578199 MT1HP80294 61 aa7.65□□□□□ -1.18
ERBB2-205ENST00000578199 PLAC4Q8WY50 150 aa7.58□□□□□ -1.2
ERBB2-205ENST00000578199 KRTAP19-1Q8IUB9 90 aa7.57□□□□□ -1.2
ERBB2-205ENST00000578199 SPRR2GQ9BYE4 73 aa7.54□□□□□ -1.2
ERBB2-205ENST00000578199 MT1FP04733 61 aa7.5□□□□□ -1.21
ERBB2-205ENST00000578199 MT2AP02795 61 aa7.49□□□□□ -1.21
ERBB2-205ENST00000578199 KRTAP10-10P60014 251 aa7.49□□□□□ -1.21
ERBB2-205ENST00000578199 KRTAP9-8Q9BYQ0 159 aa7.46□□□□□ -1.22
ERBB2-205ENST00000578199 TNP1P09430 55 aa7.45□□□□□ -1.22
ERBB2-205ENST00000578199 PP632Q6XCG6 107 aa7.44□□□□□ -1.22
ERBB2-205ENST00000578199 KRTAP19-8Q3LI54 63 aa7.22□□□□□ -1.25
ERBB2-205ENST00000578199 KRTAP23-1A1A580 65 aa7.21□□□□□ -1.26
ERBB2-205ENST00000578199 MT1BP07438 61 aa7.2□□□□□ -1.26
ERBB2-205ENST00000578199 LCE3AQ5TA76 89 aa7.16□□□□□ -1.26
ERBB2-205ENST00000578199 KRTAP9-3Q9BYQ3 159 aa7.13□□□□□ -1.27
ERBB2-205ENST00000578199 KRTAP10-5P60370 271 aa7.12□□□□□ -1.27
ERBB2-205ENST00000578199 MT1XP80297 61 aa7.11□□□□□ -1.27
ERBB2-205ENST00000578199 USH2AO75445 5202 aa7.02□□□□□ -1.29
ERBB2-205ENST00000578199 SPRR5A0A1B0GTR4 108 aa6.98□□□□□ -1.29
ERBB2-205ENST00000578199 KRTAP10-7P60409 375 aaPredicted RBP6.94□□□□□ -1.3
ERBB2-205ENST00000578199 LCE2BO14633 110 aa6.92□□□□□ -1.3
ERBB2-205ENST00000578199 KRTAP8-1Q8IUC2 63 aa6.9□□□□□ -1.31
ERBB2-205ENST00000578199 KRTAP10-12P60413 245 aa6.89□□□□□ -1.31
ERBB2-205ENST00000578199 LCE2AQ5TA79 106 aaPredicted RBP6.86□□□□□ -1.31
ERBB2-205ENST00000578199 KMT2DO14686 5537 aa6.83□□□□□ -1.32
ERBB2-205ENST00000578199 PRO2289Q9P1D8 64 aa6.81□□□□□ -1.32
ERBB2-205ENST00000578199 KRTAP12-3P60328 96 aa6.79□□□□□ -1.32
ERBB2-205ENST00000578199 KRTAP4-8A0A0G2JLE6 195 aa6.6□□□□□ -1.35
ERBB2-205ENST00000578199 KRTAP19-5Q3LI72 72 aa6.6□□□□□ -1.35
ERBB2-205ENST00000578199 KRTAP4-8Q9BYQ9 185 aa6.6□□□□□ -1.35
ERBB2-205ENST00000578199 INE1O15225 51 aa6.59□□□□□ -1.35
ERBB2-205ENST00000578199 FSIP2Q5CZC0 6907 aa6.56□□□□□ -1.36
ERBB2-205ENST00000578199 SSPOA2VEC9 5147 aa6.46□□□□□ -1.37
ERBB2-205ENST00000578199 LCE3CQ5T5A8 94 aa6.38□□□□□ -1.39
ERBB2-205ENST00000578199 KRTAP19-7Q3SYF9 63 aa6.34□□□□□ -1.39
ERBB2-205ENST00000578199 KRTAP4-7Q9BYR0 210 aa6.26□□□□□ -1.41
ERBB2-205ENST00000578199 KRTAP9-6A8MVA2 160 aa6.2□□□□□ -1.42
ERBB2-205ENST00000578199 KRTAP19-6Q3LI70 58 aa6.18□□□□□ -1.42
ERBB2-205ENST00000578199 MT1EP04732 61 aa6.15□□□□□ -1.42
ERBB2-205ENST00000578199 MT1LQ93083 61 aa6.13□□□□□ -1.43
ERBB2-205ENST00000578199 FCGBPQ9Y6R7 5405 aaPredicted RBP6.1□□□□□ -1.43
ERBB2-205ENST00000578199 MUC12Q9UKN1 5478 aa6.04□□□□□ -1.44
ERBB2-205ENST00000578199 LCE2DQ5TA82 110 aaPredicted RBP5.92□□□□□ -1.46
ERBB2-205ENST00000578199 KRTAP4-3Q9BYR4 195 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms