RNA–Protein interactions for RNA: ENST00000577967.1

NF1-218, Transcript of neurofibromin 1, humanhuman

Gene NF1, Length 5,799 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-218ENST00000577967 STAB2Q8WWQ8 2551 aa2.29□□□□□ -2.04
NF1-218ENST00000577967 C10orf95Q9H7T3 257 aa2.29□□□□□ -2.04
NF1-218ENST00000577967 TNP1P09430 55 aa2.27□□□□□ -2.05
NF1-218ENST00000577967 FAT2Q9NYQ8 4349 aa2.27□□□□□ -2.05
NF1-218ENST00000577967 PKD1L1Q8TDX9 2849 aa2.26□□□□□ -2.05
NF1-218ENST00000577967 KRTAP12-2P59991 146 aa2.26□□□□□ -2.05
NF1-218ENST00000577967 HECTD4Q9Y4D8 3996 aa2.25□□□□□ -2.05
NF1-218ENST00000577967 DNAH5Q8TE73 4624 aa2.24□□□□□ -2.05
NF1-218ENST00000577967 FLG2Q5D862 2391 aaPredicted RBP2.21□□□□□ -2.06
NF1-218ENST00000577967 LRP1BQ9NZR2 4599 aa2.21□□□□□ -2.06
NF1-218ENST00000577967 DYNC1H1Q14204 4646 aaKnown RBP2.21□□□□□ -2.06
NF1-218ENST00000577967 H3BS24 57 aa2.2□□□□□ -2.06
NF1-218ENST00000577967 KRTAP13-4Q3LI77 160 aa2.2□□□□□ -2.06
NF1-218ENST00000577967 VPS13BQ7Z7G8 4022 aa2.2□□□□□ -2.06
NF1-218ENST00000577967 DMBT1Q9UGM3 2413 aaPredicted RBP2.2□□□□□ -2.06
NF1-218ENST00000577967 TGP01266 2768 aa2.2□□□□□ -2.06
NF1-218ENST00000577967 SACSQ9NZJ4 4579 aa2.19□□□□□ -2.06
NF1-218ENST00000577967 KRTAP12-1P59990 96 aa2.19□□□□□ -2.06
NF1-218ENST00000577967 KRTAP3-3Q9BYR6 98 aa2.19□□□□□ -2.06
NF1-218ENST00000577967 KRTAP10-6P60371 365 aaPredicted RBP2.18□□□□□ -2.06
NF1-218ENST00000577967 MEGF8Q7Z7M0 2845 aa2.18□□□□□ -2.06
NF1-218ENST00000577967 PKHD1L1Q86WI1 4243 aa2.17□□□□□ -2.06
NF1-218ENST00000577967 FBN3Q75N90 2809 aa2.17□□□□□ -2.06
NF1-218ENST00000577967 PRO2289Q9P1D8 64 aa2.16□□□□□ -2.06
NF1-218ENST00000577967 PP632Q6XCG6 107 aa2.16□□□□□ -2.06
NF1-218ENST00000577967 PKD1P98161 4303 aa2.16□□□□□ -2.06
NF1-218ENST00000577967 HYDINQ4G0P3 5121 aa2.15□□□□□ -2.06
NF1-218ENST00000577967 NDUFAF8A1L188 74 aa2.15□□□□□ -2.07
NF1-218ENST00000577967 KRTAP3-2Q9BYR7 98 aa2.14□□□□□ -2.07
NF1-218ENST00000577967 DNHD1Q96M86 4753 aa2.14□□□□□ -2.07
NF1-218ENST00000577967 APOBP04114 4563 aaKnown RBP2.14□□□□□ -2.07
NF1-218ENST00000577967 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.13□□□□□ -2.07
NF1-218ENST00000577967 COL7A1Q02388 2944 aa2.11□□□□□ -2.07
NF1-218ENST00000577967 KRTAP4-1Q9BYQ7 146 aa2.11□□□□□ -2.07
NF1-218ENST00000577967 SRRM2Q9UQ35 2752 aaKnown RBP2.11□□□□□ -2.07
NF1-218ENST00000577967 LORP23490 312 aaPredicted RBP2.1□□□□□ -2.07
NF1-218ENST00000577967 KRTAP4-8Q9BYQ9 185 aa2.1□□□□□ -2.07
NF1-218ENST00000577967 HSPG2P98160 4391 aa2.1□□□□□ -2.07
NF1-218ENST00000577967 FAT1Q14517 4588 aa2.09□□□□□ -2.07
NF1-218ENST00000577967 KRTAP9-2Q9BYQ4 174 aa2.07□□□□□ -2.08
NF1-218ENST00000577967 TNXBP22105 4242 aa2.07□□□□□ -2.08
NF1-218ENST00000577967 RYR2Q92736 4967 aa2.06□□□□□ -2.08
NF1-218ENST00000577967 FAT3Q8TDW7 4589 aa2.06□□□□□ -2.08
NF1-218ENST00000577967 PKHD1P08F94 4074 aa2.05□□□□□ -2.08
NF1-218ENST00000577967 LCE2AQ5TA79 106 aaPredicted RBP2.04□□□□□ -2.08
NF1-218ENST00000577967 KRTAP9-6A0A140TA67 174 aa2.03□□□□□ -2.08
NF1-218ENST00000577967 MT1HP80294 61 aa2.03□□□□□ -2.08
NF1-218ENST00000577967 LCE2BO14633 110 aa2□□□□□ -2.09
NF1-218ENST00000577967 KRTAP15-1Q3LI76 137 aa2□□□□□ -2.09
NF1-218ENST00000577967 RYR3Q15413 4870 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 KRTAP9-9Q9BYP9 154 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 KRTAP9-4Q9BYQ2 154 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 LPAP08519 4548 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 MUC17Q685J3 4493 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 KRTAP10-12P60413 245 aa1.99□□□□□ -2.09
NF1-218ENST00000577967 RYR1P21817 5038 aa1.98□□□□□ -2.09
NF1-218ENST00000577967 LCE3AQ5TA76 89 aa1.98□□□□□ -2.09
NF1-218ENST00000577967 LRP1Q07954 4544 aaKnown RBP1.97□□□□□ -2.09
NF1-218ENST00000577967 KRTAP4-8A0A0G2JLE6 195 aa1.95□□□□□ -2.1
NF1-218ENST00000577967 MT2AP02795 61 aa1.95□□□□□ -2.1
NF1-218ENST00000577967 KRTAP4-2Q9BYR5 136 aa1.94□□□□□ -2.1
NF1-218ENST00000577967 MT1FP04733 61 aa1.94□□□□□ -2.1
NF1-218ENST00000577967 KRTAP5-3Q6L8H2 238 aa1.93□□□□□ -2.1
NF1-218ENST00000577967 KRTAP4-12Q9BQ66 201 aa1.92□□□□□ -2.1
NF1-218ENST00000577967 KRTAP4-7Q9BYR0 210 aa1.92□□□□□ -2.1
NF1-218ENST00000577967 MYCBP2O75592 4640 aa1.92□□□□□ -2.1
NF1-218ENST00000577967 CRCT1Q9UGL9 99 aa1.92□□□□□ -2.1
NF1-218ENST00000577967 KRTAP12-3P60328 96 aa1.91□□□□□ -2.1
NF1-218ENST00000577967 SPRR2GQ9BYE4 73 aa1.9□□□□□ -2.11
NF1-218ENST00000577967 KRTAP9-8Q9BYQ0 159 aa1.89□□□□□ -2.11
NF1-218ENST00000577967 BIRC6Q9NR09 4857 aa1.87□□□□□ -2.11
NF1-218ENST00000577967 KMT2CQ8NEZ4 4911 aaKnown RBP1.87□□□□□ -2.11
NF1-218ENST00000577967 KRTAP23-1A1A580 65 aa1.87□□□□□ -2.11
NF1-218ENST00000577967 KRTAP8-1Q8IUC2 63 aa1.86□□□□□ -2.11
NF1-218ENST00000577967 HERC1Q15751 4861 aa1.86□□□□□ -2.11
NF1-218ENST00000577967 EPPK1P58107 5090 aaKnown RBP1.85□□□□□ -2.11
NF1-218ENST00000577967 KIAA1109Q2LD37 5005 aa1.84□□□□□ -2.11
NF1-218ENST00000577967 LCE2CQ5TA81 110 aa1.84□□□□□ -2.12
NF1-218ENST00000577967 KRTAP19-5Q3LI72 72 aa1.81□□□□□ -2.12
NF1-218ENST00000577967 KRTAP19-1Q8IUB9 90 aa1.81□□□□□ -2.12
NF1-218ENST00000577967 KRTAP10-7P60409 375 aaPredicted RBP1.8□□□□□ -2.12
NF1-218ENST00000577967 LRP2P98164 4655 aa1.8□□□□□ -2.12
NF1-218ENST00000577967 KRTAP4-9Q9BYQ8 210 aa1.8□□□□□ -2.12
NF1-218ENST00000577967 HERC2O95714 4834 aa1.79□□□□□ -2.12
NF1-218ENST00000577967 KRTAP19-2Q3LHN2 52 aa1.78□□□□□ -2.12
NF1-218ENST00000577967 KRTAP19-8Q3LI54 63 aa1.78□□□□□ -2.12
NF1-218ENST00000577967 INE1O15225 51 aa1.77□□□□□ -2.13
NF1-218ENST00000577967 MT1XP80297 61 aa1.77□□□□□ -2.13
NF1-218ENST00000577967 MT1BP07438 61 aa1.77□□□□□ -2.13
NF1-218ENST00000577967 KRTAP10-5P60370 271 aa1.77□□□□□ -2.13
NF1-218ENST00000577967 KRTAP9-3Q9BYQ3 159 aa1.76□□□□□ -2.13
NF1-218ENST00000577967 SPRR2FQ96RM1 72 aa1.75□□□□□ -2.13
NF1-218ENST00000577967 FLGP20930 4061 aaPredicted RBP1.74□□□□□ -2.13
NF1-218ENST00000577967 ABCA13Q86UQ4 5058 aa1.74□□□□□ -2.13
NF1-218ENST00000577967 LCE3CQ5T5A8 94 aa1.73□□□□□ -2.13
NF1-218ENST00000577967 PCLOQ9Y6V0 5065 aa1.71□□□□□ -2.14
NF1-218ENST00000577967 SPRR2EP22531 72 aa1.68□□□□□ -2.14
NF1-218ENST00000577967 SPRR2BP35325 72 aa1.68□□□□□ -2.14
NF1-218ENST00000577967 SPRR2AP35326 72 aa1.68□□□□□ -2.14
NF1-218ENST00000577967 LCE1DQ5T752 114 aa1.68□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms