RNA–Protein interactions for RNA: ENST00000577625.5

RNF43-202, Transcript of ring finger protein 43, humanhuman

TSL 2 BASIC

Gene RNF43, Length 2,198 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43-202ENST00000577625 IGKV2-30P06310 120 aa7.65□□□□□ -1.18
RNF43-202ENST00000577625 FAT3Q8TDW7 4589 aa7.61□□□□□ -1.19
RNF43-202ENST00000577625 A8MUU9 505 aa7.61□□□□□ -1.19
RNF43-202ENST00000577625 J3QL48 77 aa7.61□□□□□ -1.19
RNF43-202ENST00000577625 DMBT1Q9UGM3 2413 aaPredicted RBP7.6□□□□□ -1.19
RNF43-202ENST00000577625 MYCBP2O75592 4640 aa7.58□□□□□ -1.2
RNF43-202ENST00000577625 MT1HL1P0DM35 61 aa7.54□□□□□ -1.2
RNF43-202ENST00000577625 KRTAP4-5Q9BYR2 181 aa7.52□□□□□ -1.21
RNF43-202ENST00000577625 IGKV2D-30A0A075B6S6 120 aa7.51□□□□□ -1.21
RNF43-202ENST00000577625 C9orf92A6NGG3 77 aa7.5□□□□□ -1.21
RNF43-202ENST00000577625 H0YAA0 97 aa7.49□□□□□ -1.21
RNF43-202ENST00000577625 P0C880 135 aa7.48□□□□□ -1.21
RNF43-202ENST00000577625 C20orf166-AS1Q96NR2 134 aa7.47□□□□□ -1.21
RNF43-202ENST00000577625 A0A1B0GU33 70 aa7.37□□□□□ -1.23
RNF43-202ENST00000577625 BIRC6Q9NR09 4857 aa7.35□□□□□ -1.23
RNF43-202ENST00000577625 K7ERS5 55 aa7.33□□□□□ -1.24
RNF43-202ENST00000577625 H1FX-AS1Q4G0G2 97 aa7.33□□□□□ -1.24
RNF43-202ENST00000577625 ABCA13Q86UQ4 5058 aa7.32□□□□□ -1.24
RNF43-202ENST00000577625 CRIPTQ9P021 101 aa7.31□□□□□ -1.24
RNF43-202ENST00000577625 HERC2O95714 4834 aa7.31□□□□□ -1.24
RNF43-202ENST00000577625 XP32Q5T750 250 aa7.3□□□□□ -1.24
RNF43-202ENST00000577625 RPL37P61927 97 aaKnown RBP7.26□□□□□ -1.25
RNF43-202ENST00000577625 SPINT4Q6UDR6 99 aa7.25□□□□□ -1.25
RNF43-202ENST00000577625 TPRXLQ17RH7 258 aa7.23□□□□□ -1.25
RNF43-202ENST00000577625 NDUFAF8A1L188 74 aa7.18□□□□□ -1.26
RNF43-202ENST00000577625 KRTAP15-1Q3LI76 137 aa7.16□□□□□ -1.26
RNF43-202ENST00000577625 LPAP08519 4548 aa7.13□□□□□ -1.27
RNF43-202ENST00000577625 COX6B2Q6YFQ2 88 aa7.13□□□□□ -1.27
RNF43-202ENST00000577625 LRP2P98164 4655 aa7.13□□□□□ -1.27
RNF43-202ENST00000577625 KRTAP3-1Q9BYR8 98 aa7.11□□□□□ -1.27
RNF43-202ENST00000577625 A0A0A0MQY5 61 aa7.1□□□□□ -1.27
RNF43-202ENST00000577625 PCLOQ9Y6V0 5065 aa7.02□□□□□ -1.29
RNF43-202ENST00000577625 C10orf95Q9H7T3 257 aa6.98□□□□□ -1.29
RNF43-202ENST00000577625 SEC61BP60468 96 aaKnown RBP6.95□□□□□ -1.3
RNF43-202ENST00000577625 LCE2BO14633 110 aa6.95□□□□□ -1.3
RNF43-202ENST00000577625 HERC1Q15751 4861 aa6.91□□□□□ -1.3
RNF43-202ENST00000577625 A0A0D9SG42 100 aa6.89□□□□□ -1.31
RNF43-202ENST00000577625 KRTAP10-6P60371 365 aaPredicted RBP6.88□□□□□ -1.31
RNF43-202ENST00000577625 KRTAP13-4Q3LI77 160 aa6.88□□□□□ -1.31
RNF43-202ENST00000577625 KRTAP4-1Q9BYQ7 146 aa6.87□□□□□ -1.31
RNF43-202ENST00000577625 S4R3F8 94 aa6.85□□□□□ -1.31
RNF43-202ENST00000577625 MUC17Q685J3 4493 aa6.85□□□□□ -1.31
RNF43-202ENST00000577625 HMCN2Q8NDA2 5059 aa6.82□□□□□ -1.32
RNF43-202ENST00000577625 LUZP6Q538Z0 58 aa6.79□□□□□ -1.32
RNF43-202ENST00000577625 KRTAP12-2P59991 146 aa6.73□□□□□ -1.33
RNF43-202ENST00000577625 LCE2CQ5TA81 110 aa6.72□□□□□ -1.33
RNF43-202ENST00000577625 KRTAP19-2Q3LHN2 52 aa6.71□□□□□ -1.34
RNF43-202ENST00000577625 MUC2Q02817 5179 aa6.66□□□□□ -1.34
RNF43-202ENST00000577625 KRTAP12-1P59990 96 aa6.65□□□□□ -1.34
RNF43-202ENST00000577625 LCE2AQ5TA79 106 aaPredicted RBP6.59□□□□□ -1.35
RNF43-202ENST00000577625 FLGP20930 4061 aaPredicted RBP6.58□□□□□ -1.36
RNF43-202ENST00000577625 PLAC4Q8WY50 150 aa6.55□□□□□ -1.36
RNF43-202ENST00000577625 UBR4Q5T4S7 5183 aa6.52□□□□□ -1.37
RNF43-202ENST00000577625 M0QZ58 72 aa6.49□□□□□ -1.37
RNF43-202ENST00000577625 RNF213Q63HN8 5207 aa6.47□□□□□ -1.37
RNF43-202ENST00000577625 LORP23490 312 aaPredicted RBP6.45□□□□□ -1.38
RNF43-202ENST00000577625 FAT4Q6V0I7 4981 aa6.37□□□□□ -1.39
RNF43-202ENST00000577625 MT1HP80294 61 aa6.34□□□□□ -1.4
RNF43-202ENST00000577625 R4GN34 69 aa6.33□□□□□ -1.4
RNF43-202ENST00000577625 M0R2T5 61 aa6.26□□□□□ -1.41
RNF43-202ENST00000577625 PP632Q6XCG6 107 aa6.24□□□□□ -1.41
RNF43-202ENST00000577625 KRTAP9-8Q9BYQ0 159 aa6.13□□□□□ -1.43
RNF43-202ENST00000577625 MT2AP02795 61 aa6.12□□□□□ -1.43
RNF43-202ENST00000577625 MT1FP04733 61 aa6.1□□□□□ -1.43
RNF43-202ENST00000577625 CAMK2N1Q7Z7J9 78 aa6.1□□□□□ -1.43
RNF43-202ENST00000577625 KRTAP10-10P60014 251 aa6.06□□□□□ -1.44
RNF43-202ENST00000577625 SPRR2GQ9BYE4 73 aa6.04□□□□□ -1.44
RNF43-202ENST00000577625 KRTAP19-1Q8IUB9 90 aa6.04□□□□□ -1.44
RNF43-202ENST00000577625 SPRR5A0A1B0GTR4 108 aa6.03□□□□□ -1.44
RNF43-202ENST00000577625 PRO2289Q9P1D8 64 aa6□□□□□ -1.45
RNF43-202ENST00000577625 KRTAP23-1A1A580 65 aa5.9□□□□□ -1.47
RNF43-202ENST00000577625 KRTAP9-3Q9BYQ3 159 aa5.9□□□□□ -1.47
RNF43-202ENST00000577625 KRTAP19-8Q3LI54 63 aa5.87□□□□□ -1.47
RNF43-202ENST00000577625 INE1O15225 51 aa5.82□□□□□ -1.48
RNF43-202ENST00000577625 MT1BP07438 61 aa5.8□□□□□ -1.48
RNF43-202ENST00000577625 TNP1P09430 55 aa5.8□□□□□ -1.48
RNF43-202ENST00000577625 MT1XP80297 61 aa5.65□□□□□ -1.51
RNF43-202ENST00000577625 KRTAP10-5P60370 271 aa5.63□□□□□ -1.51
RNF43-202ENST00000577625 USH2AO75445 5202 aa5.52□□□□□ -1.53
RNF43-202ENST00000577625 KRTAP10-7P60409 375 aaPredicted RBP5.43□□□□□ -1.54
RNF43-202ENST00000577625 LCE3AQ5TA76 89 aa5.42□□□□□ -1.54
RNF43-202ENST00000577625 KRTAP10-12P60413 245 aa5.38□□□□□ -1.55
RNF43-202ENST00000577625 SSPOA2VEC9 5147 aa5.36□□□□□ -1.55
RNF43-202ENST00000577625 KRTAP8-1Q8IUC2 63 aa5.33□□□□□ -1.56
RNF43-202ENST00000577625 KRTAP19-6Q3LI70 58 aa5.32□□□□□ -1.56
RNF43-202ENST00000577625 FSIP2Q5CZC0 6907 aa5.22□□□□□ -1.57
RNF43-202ENST00000577625 KRTAP12-3P60328 96 aa5.2□□□□□ -1.58
RNF43-202ENST00000577625 KRTAP4-8A0A0G2JLE6 195 aa5.19□□□□□ -1.58
RNF43-202ENST00000577625 KRTAP4-8Q9BYQ9 185 aa5.19□□□□□ -1.58
RNF43-202ENST00000577625 KMT2DO14686 5537 aa5.17□□□□□ -1.58
RNF43-202ENST00000577625 KRTAP19-5Q3LI72 72 aa5.12□□□□□ -1.59
RNF43-202ENST00000577625 KRTAP9-2Q9BYQ4 174 aa5.11□□□□□ -1.59
RNF43-202ENST00000577625 FCGBPQ9Y6R7 5405 aaPredicted RBP5.09□□□□□ -1.59
RNF43-202ENST00000577625 KRTAP19-7Q3SYF9 63 aa5.03□□□□□ -1.6
RNF43-202ENST00000577625 KRTAP19-4Q3LI73 84 aa4.96□□□□□ -1.62
RNF43-202ENST00000577625 CRCT1Q9UGL9 99 aa4.94□□□□□ -1.62
RNF43-202ENST00000577625 MT1EP04732 61 aa4.93□□□□□ -1.62
RNF43-202ENST00000577625 LCE3CQ5T5A8 94 aa4.87□□□□□ -1.63
RNF43-202ENST00000577625 MT1LQ93083 61 aa4.85□□□□□ -1.63
RNF43-202ENST00000577625 LOC100996750A0A140TA64 210 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms