RNA–Protein interactions for RNA: ENST00000577439.1

LINC00667-201, long intergenic non-protein coding RNA 667, humanhuman

TSL 1 (best)

Gene LINC00667, Length 3,372 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00667-201ENST00000577439 VPS13BQ7Z7G8 4022 aa3.53□□□□□ -1.84
LINC00667-201ENST00000577439 HYDINQ4G0P3 5121 aa3.53□□□□□ -1.84
LINC00667-201ENST00000577439 C20orf166-AS1Q96NR2 134 aa3.53□□□□□ -1.84
LINC00667-201ENST00000577439 SPINT4Q6UDR6 99 aa3.53□□□□□ -1.84
LINC00667-201ENST00000577439 SPINK1P00995 79 aa3.51□□□□□ -1.85
LINC00667-201ENST00000577439 HERC2O95714 4834 aa3.49□□□□□ -1.85
LINC00667-201ENST00000577439 RPS29P62273 56 aaKnown RBP3.48□□□□□ -1.85
LINC00667-201ENST00000577439 DYNC1H1Q14204 4646 aaKnown RBP3.47□□□□□ -1.85
LINC00667-201ENST00000577439 KRTAP19-4Q3LI73 84 aa3.46□□□□□ -1.85
LINC00667-201ENST00000577439 H0YAA0 97 aa3.46□□□□□ -1.86
LINC00667-201ENST00000577439 PKHD1L1Q86WI1 4243 aa3.45□□□□□ -1.86
LINC00667-201ENST00000577439 PKHD1P08F94 4074 aa3.44□□□□□ -1.86
LINC00667-201ENST00000577439 EPPK1P58107 5090 aaKnown RBP3.43□□□□□ -1.86
LINC00667-201ENST00000577439 APOBP04114 4563 aaKnown RBP3.42□□□□□ -1.86
LINC00667-201ENST00000577439 C9orf92A6NGG3 77 aa3.41□□□□□ -1.86
LINC00667-201ENST00000577439 DMBT1Q9UGM3 2413 aaPredicted RBP3.41□□□□□ -1.86
LINC00667-201ENST00000577439 KRTAP9-4Q9BYQ2 154 aa3.4□□□□□ -1.86
LINC00667-201ENST00000577439 LCE5AQ5TCM9 118 aa3.4□□□□□ -1.87
LINC00667-201ENST00000577439 A0A1B0GU33 70 aa3.37□□□□□ -1.87
LINC00667-201ENST00000577439 KRTAP10-4P60372 401 aaPredicted RBP3.37□□□□□ -1.87
LINC00667-201ENST00000577439 H1FX-AS1Q4G0G2 97 aa3.37□□□□□ -1.87
LINC00667-201ENST00000577439 SMR3BP02814 79 aaPredicted RBP3.37□□□□□ -1.87
LINC00667-201ENST00000577439 TPRXLQ17RH7 258 aa3.37□□□□□ -1.87
LINC00667-201ENST00000577439 FAT1Q14517 4588 aa3.37□□□□□ -1.87
LINC00667-201ENST00000577439 KRTAP17-1Q9BYP8 105 aa3.34□□□□□ -1.87
LINC00667-201ENST00000577439 C10orf95Q9H7T3 257 aa3.34□□□□□ -1.87
LINC00667-201ENST00000577439 COX6B2Q6YFQ2 88 aa3.34□□□□□ -1.88
LINC00667-201ENST00000577439 A0A1B0GVY2 172 aa3.33□□□□□ -1.88
LINC00667-201ENST00000577439 KRTAP9-9Q9BYP9 154 aa3.32□□□□□ -1.88
LINC00667-201ENST00000577439 R4GN34 69 aa3.32□□□□□ -1.88
LINC00667-201ENST00000577439 FAT3Q8TDW7 4589 aa3.31□□□□□ -1.88
LINC00667-201ENST00000577439 KRTAP9-6A0A140TA67 174 aa3.3□□□□□ -1.88
LINC00667-201ENST00000577439 KRTAP9-7A8MTY7 169 aa3.3□□□□□ -1.88
LINC00667-201ENST00000577439 LCE4AQ5TA78 99 aa3.29□□□□□ -1.88
LINC00667-201ENST00000577439 TNXBP22105 4242 aa3.28□□□□□ -1.88
LINC00667-201ENST00000577439 HSPG2P98160 4391 aa3.28□□□□□ -1.88
LINC00667-201ENST00000577439 PCLOQ9Y6V0 5065 aa3.27□□□□□ -1.89
LINC00667-201ENST00000577439 KRTAP10-6P60371 365 aaPredicted RBP3.26□□□□□ -1.89
LINC00667-201ENST00000577439 LRP1Q07954 4544 aaKnown RBP3.25□□□□□ -1.89
LINC00667-201ENST00000577439 RPL37P61927 97 aaKnown RBP3.25□□□□□ -1.89
LINC00667-201ENST00000577439 RYR1P21817 5038 aa3.24□□□□□ -1.89
LINC00667-201ENST00000577439 KRTAP13-4Q3LI77 160 aa3.24□□□□□ -1.89
LINC00667-201ENST00000577439 KRTAP10-8P60410 259 aa3.23□□□□□ -1.89
LINC00667-201ENST00000577439 A0A0D9SG42 100 aa3.22□□□□□ -1.89
LINC00667-201ENST00000577439 XP32Q5T750 250 aa3.21□□□□□ -1.89
LINC00667-201ENST00000577439 S4R3F8 94 aa3.21□□□□□ -1.89
LINC00667-201ENST00000577439 ABCA13Q86UQ4 5058 aa3.21□□□□□ -1.89
LINC00667-201ENST00000577439 Q5VSD8 79 aa3.17□□□□□ -1.9
LINC00667-201ENST00000577439 MYCBP2O75592 4640 aa3.17□□□□□ -1.9
LINC00667-201ENST00000577439 PRO2289Q9P1D8 64 aa3.14□□□□□ -1.91
LINC00667-201ENST00000577439 KRTAP12-2P59991 146 aa3.14□□□□□ -1.91
LINC00667-201ENST00000577439 KIAA1109Q2LD37 5005 aa3.12□□□□□ -1.91
LINC00667-201ENST00000577439 LPAP08519 4548 aa3.12□□□□□ -1.91
LINC00667-201ENST00000577439 MT1HL1P0DM35 61 aa3.11□□□□□ -1.91
LINC00667-201ENST00000577439 KRTAP12-1P59990 96 aa3.11□□□□□ -1.91
LINC00667-201ENST00000577439 PLAC4Q8WY50 150 aa3.1□□□□□ -1.91
LINC00667-201ENST00000577439 LRP2P98164 4655 aa3.07□□□□□ -1.92
LINC00667-201ENST00000577439 M0QZ58 72 aa3.07□□□□□ -1.92
LINC00667-201ENST00000577439 KRTAP19-1Q8IUB9 90 aa3.04□□□□□ -1.92
LINC00667-201ENST00000577439 KRTAP4-5Q9BYR2 181 aa3.04□□□□□ -1.92
LINC00667-201ENST00000577439 KRTAP9-3Q9BYQ3 159 aa3.04□□□□□ -1.92
LINC00667-201ENST00000577439 LCE1FQ5T754 118 aa3.02□□□□□ -1.93
LINC00667-201ENST00000577439 HMCN2Q8NDA2 5059 aa3□□□□□ -1.93
LINC00667-201ENST00000577439 MUC17Q685J3 4493 aa2.99□□□□□ -1.93
LINC00667-201ENST00000577439 LCE1AQ5T7P2 110 aa2.97□□□□□ -1.93
LINC00667-201ENST00000577439 HERC1Q15751 4861 aa2.93□□□□□ -1.94
LINC00667-201ENST00000577439 KRTAP4-1Q9BYQ7 146 aa2.92□□□□□ -1.94
LINC00667-201ENST00000577439 KRTAP2-2Q9BYT5 123 aa2.9□□□□□ -1.95
LINC00667-201ENST00000577439 KRTAP19-2Q3LHN2 52 aa2.89□□□□□ -1.95
LINC00667-201ENST00000577439 LOC100996750A0A140TA64 210 aa2.85□□□□□ -1.95
LINC00667-201ENST00000577439 KRTAP4-6Q9BYQ5 205 aa2.85□□□□□ -1.95
LINC00667-201ENST00000577439 PP632Q6XCG6 107 aa2.84□□□□□ -1.96
LINC00667-201ENST00000577439 LCE3CQ5T5A8 94 aa2.81□□□□□ -1.96
LINC00667-201ENST00000577439 KRTAP4-12Q9BQ66 201 aa2.81□□□□□ -1.96
LINC00667-201ENST00000577439 FLGP20930 4061 aaPredicted RBP2.8□□□□□ -1.96
LINC00667-201ENST00000577439 MT3P25713 68 aa2.77□□□□□ -1.97
LINC00667-201ENST00000577439 MUC2Q02817 5179 aa2.76□□□□□ -1.97
LINC00667-201ENST00000577439 INE1O15225 51 aa2.76□□□□□ -1.97
LINC00667-201ENST00000577439 KRTAP9-1A8MXZ3 250 aaPredicted RBP2.75□□□□□ -1.97
LINC00667-201ENST00000577439 SPRR5A0A1B0GTR4 108 aa2.74□□□□□ -1.97
LINC00667-201ENST00000577439 TNP1P09430 55 aa2.74□□□□□ -1.97
LINC00667-201ENST00000577439 KRTAP9-2Q9BYQ4 174 aa2.73□□□□□ -1.97
LINC00667-201ENST00000577439 FAT4Q6V0I7 4981 aa2.73□□□□□ -1.97
LINC00667-201ENST00000577439 HMCN1Q96RW7 5635 aa2.71□□□□□ -1.98
LINC00667-201ENST00000577439 KRTAP4-8Q9BYQ9 185 aa2.7□□□□□ -1.98
LINC00667-201ENST00000577439 RNF213Q63HN8 5207 aa2.7□□□□□ -1.98
LINC00667-201ENST00000577439 UBR4Q5T4S7 5183 aa2.69□□□□□ -1.98
LINC00667-201ENST00000577439 SPRR2GQ9BYE4 73 aa2.68□□□□□ -1.98
LINC00667-201ENST00000577439 KRTAP10-12P60413 245 aa2.64□□□□□ -1.99
LINC00667-201ENST00000577439 LCE3BQ5TA77 95 aa2.63□□□□□ -1.99
LINC00667-201ENST00000577439 LCE3EQ5T5B0 92 aa2.61□□□□□ -1.99
LINC00667-201ENST00000577439 MT1HP80294 61 aa2.6□□□□□ -1.99
LINC00667-201ENST00000577439 LCE3AQ5TA76 89 aa2.6□□□□□ -1.99
LINC00667-201ENST00000577439 MT1FP04733 61 aa2.58□□□□□ -2
LINC00667-201ENST00000577439 KRTAP9-8Q9BYQ0 159 aa2.58□□□□□ -2
LINC00667-201ENST00000577439 M0R2T5 61 aa2.58□□□□□ -2
LINC00667-201ENST00000577439 MT2AP02795 61 aa2.58□□□□□ -2
LINC00667-201ENST00000577439 MUC5BQ9HC84 5762 aaPredicted RBP2.58□□□□□ -2
LINC00667-201ENST00000577439 LCE1EQ5T753 118 aa2.57□□□□□ -2
LINC00667-201ENST00000577439 KRTAP19-8Q3LI54 63 aa2.55□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms