RNA–Protein interactions for RNA: ENST00000577001.1

PRPF8-216, Transcript of pre-mRNA processing factor 8, human

TSL 5

Gene PRPF8, Length 3,274 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PRPF8-216	ENST00000577001	LINC01554	Q52M75	96 aa		7.76	□□□□□ -1.17
PRPF8-216	ENST00000577001	KRTAP17-1	Q9BYP8	105 aa		7.76	□□□□□ -1.17
PRPF8-216	ENST00000577001		A0A1B0GVY2	172 aa		7.76	□□□□□ -1.17
PRPF8-216	ENST00000577001		Q5VSD8	79 aa		7.75	□□□□□ -1.17
PRPF8-216	ENST00000577001	RYR3	Q15413	4870 aa		7.75	□□□□□ -1.17
PRPF8-216	ENST00000577001	H1FX-AS1	Q4G0G2	97 aa		7.74	□□□□□ -1.17
PRPF8-216	ENST00000577001	RYR1	P21817	5038 aa		7.74	□□□□□ -1.17
PRPF8-216	ENST00000577001	COX6B2	Q6YFQ2	88 aa		7.72	□□□□□ -1.17
PRPF8-216	ENST00000577001	LRP2	P98164	4655 aa		7.72	□□□□□ -1.17
PRPF8-216	ENST00000577001	KRTAP13-4	Q3LI77	160 aa		7.65	□□□□□ -1.18
PRPF8-216	ENST00000577001		P0C880	135 aa		7.63	□□□□□ -1.19
PRPF8-216	ENST00000577001	C10orf95	Q9H7T3	257 aa		7.61	□□□□□ -1.19
PRPF8-216	ENST00000577001	XP32	Q5T750	250 aa		7.59	□□□□□ -1.19
PRPF8-216	ENST00000577001	ABCA13	Q86UQ4	5058 aa		7.59	□□□□□ -1.19
PRPF8-216	ENST00000577001	SPINT4	Q6UDR6	99 aa		7.59	□□□□□ -1.19
PRPF8-216	ENST00000577001	RPS29	P62273	56 aa	Known RBP	7.58	□□□□□ -1.2
PRPF8-216	ENST00000577001	TNXB	P22105	4242 aa		7.58	□□□□□ -1.2
PRPF8-216	ENST00000577001	EPPK1	P58107	5090 aa	Known RBP	7.57	□□□□□ -1.2
PRPF8-216	ENST00000577001	KRTAP3-3	Q9BYR6	98 aa		7.55	□□□□□ -1.2
PRPF8-216	ENST00000577001		K7ERS5	55 aa		7.54	□□□□□ -1.2
PRPF8-216	ENST00000577001		S4R3F8	94 aa		7.54	□□□□□ -1.2
PRPF8-216	ENST00000577001	KRTAP10-6	P60371	365 aa	Predicted RBP	7.52	□□□□□ -1.21
PRPF8-216	ENST00000577001	KRTAP25-1	Q3LHN0	102 aa		7.5	□□□□□ -1.21
PRPF8-216	ENST00000577001	RPL37	P61927	97 aa	Known RBP	7.49	□□□□□ -1.21
PRPF8-216	ENST00000577001	MUC2	Q02817	5179 aa		7.47	□□□□□ -1.21
PRPF8-216	ENST00000577001	KRTAP4-5	Q9BYR2	181 aa		7.44	□□□□□ -1.22
PRPF8-216	ENST00000577001	KRTAP3-2	Q9BYR7	98 aa		7.43	□□□□□ -1.22
PRPF8-216	ENST00000577001		H3BS24	57 aa		7.41	□□□□□ -1.22
PRPF8-216	ENST00000577001	KRTAP12-2	P59991	146 aa		7.39	□□□□□ -1.23
PRPF8-216	ENST00000577001	MT1HL1	P0DM35	61 aa		7.37	□□□□□ -1.23
PRPF8-216	ENST00000577001	ROMO1	P60602	79 aa		7.37	□□□□□ -1.23
PRPF8-216	ENST00000577001	TPRXL	Q17RH7	258 aa		7.36	□□□□□ -1.23
PRPF8-216	ENST00000577001		M0QZ58	72 aa		7.23	□□□□□ -1.25
PRPF8-216	ENST00000577001	LOR	P23490	312 aa	Predicted RBP	7.2	□□□□□ -1.26
PRPF8-216	ENST00000577001	KRTAP12-1	P59990	96 aa		7.19	□□□□□ -1.26
PRPF8-216	ENST00000577001		R4GN34	69 aa		7.15	□□□□□ -1.27
PRPF8-216	ENST00000577001		J3QL48	77 aa		7.13	□□□□□ -1.27
PRPF8-216	ENST00000577001	HERC2	O95714	4834 aa		7.12	□□□□□ -1.27
PRPF8-216	ENST00000577001	KRTAP4-1	Q9BYQ7	146 aa		7.1	□□□□□ -1.27
PRPF8-216	ENST00000577001	FAT4	Q6V0I7	4981 aa		7.07	□□□□□ -1.28
PRPF8-216	ENST00000577001	NDUFAF8	A1L188	74 aa		7.06	□□□□□ -1.28
PRPF8-216	ENST00000577001	HERC1	Q15751	4861 aa		7.03	□□□□□ -1.28
PRPF8-216	ENST00000577001	RNF213	Q63HN8	5207 aa		7.01	□□□□□ -1.29
PRPF8-216	ENST00000577001	CAMK2N1	Q7Z7J9	78 aa		6.9	□□□□□ -1.31
PRPF8-216	ENST00000577001	MUC17	Q685J3	4493 aa		6.89	□□□□□ -1.31
PRPF8-216	ENST00000577001	SEC61B	P60468	96 aa	Known RBP	6.88	□□□□□ -1.31
PRPF8-216	ENST00000577001	PCLO	Q9Y6V0	5065 aa		6.85	□□□□□ -1.31
PRPF8-216	ENST00000577001	BIRC6	Q9NR09	4857 aa		6.85	□□□□□ -1.31
PRPF8-216	ENST00000577001	KRTAP15-1	Q3LI76	137 aa		6.79	□□□□□ -1.32
PRPF8-216	ENST00000577001	UBR4	Q5T4S7	5183 aa		6.75	□□□□□ -1.33
PRPF8-216	ENST00000577001		M0R2T5	61 aa		6.67	□□□□□ -1.34
PRPF8-216	ENST00000577001	HMCN2	Q8NDA2	5059 aa		6.67	□□□□□ -1.34
PRPF8-216	ENST00000577001	PLAC4	Q8WY50	150 aa		6.63	□□□□□ -1.35
PRPF8-216	ENST00000577001	KRTAP19-2	Q3LHN2	52 aa		6.59	□□□□□ -1.35
PRPF8-216	ENST00000577001	FLG	P20930	4061 aa	Predicted RBP	6.52	□□□□□ -1.37
PRPF8-216	ENST00000577001	TNP1	P09430	55 aa		6.38	□□□□□ -1.39
PRPF8-216	ENST00000577001	KRTAP10-10	P60014	251 aa		6.37	□□□□□ -1.39
PRPF8-216	ENST00000577001	LUZP6	Q538Z0	58 aa		6.36	□□□□□ -1.39
PRPF8-216	ENST00000577001	USH2A	O75445	5202 aa		6.35	□□□□□ -1.39
PRPF8-216	ENST00000577001	LCE2C	Q5TA81	110 aa		6.29	□□□□□ -1.4
PRPF8-216	ENST00000577001	KMT2D	O14686	5537 aa		6.24	□□□□□ -1.41
PRPF8-216	ENST00000577001	KRTAP19-1	Q8IUB9	90 aa		6.23	□□□□□ -1.41
PRPF8-216	ENST00000577001	MT1F	P04733	61 aa		6.21	□□□□□ -1.42
PRPF8-216	ENST00000577001	LCE3A	Q5TA76	89 aa		6.19	□□□□□ -1.42
PRPF8-216	ENST00000577001	MT1H	P80294	61 aa		6.19	□□□□□ -1.42
PRPF8-216	ENST00000577001	PP632	Q6XCG6	107 aa		6.17	□□□□□ -1.42
PRPF8-216	ENST00000577001	FSIP2	Q5CZC0	6907 aa		6.16	□□□□□ -1.42
PRPF8-216	ENST00000577001	MT2A	P02795	61 aa		6.13	□□□□□ -1.43
PRPF8-216	ENST00000577001		A0A0A0MQY5	61 aa		6.06	□□□□□ -1.44
PRPF8-216	ENST00000577001	SPRR2G	Q9BYE4	73 aa		6.03	□□□□□ -1.44
PRPF8-216	ENST00000577001	KRTAP9-8	Q9BYQ0	159 aa		6	□□□□□ -1.45
PRPF8-216	ENST00000577001	KRTAP10-7	P60409	375 aa	Predicted RBP	5.92	□□□□□ -1.46
PRPF8-216	ENST00000577001	MT1B	P07438	61 aa		5.89	□□□□□ -1.47
PRPF8-216	ENST00000577001	KRTAP10-5	P60370	271 aa		5.87	□□□□□ -1.47
PRPF8-216	ENST00000577001	MT1X	P80297	61 aa		5.87	□□□□□ -1.47
PRPF8-216	ENST00000577001	KRTAP10-12	P60413	245 aa		5.82	□□□□□ -1.48
PRPF8-216	ENST00000577001	KRTAP12-3	P60328	96 aa		5.79	□□□□□ -1.48
PRPF8-216	ENST00000577001	KRTAP4-8	A0A0G2JLE6	195 aa		5.75	□□□□□ -1.49
PRPF8-216	ENST00000577001	KRTAP4-8	Q9BYQ9	185 aa		5.75	□□□□□ -1.49
PRPF8-216	ENST00000577001	SPRR5	A0A1B0GTR4	108 aa		5.72	□□□□□ -1.49
PRPF8-216	ENST00000577001	KRTAP9-3	Q9BYQ3	159 aa		5.7	□□□□□ -1.5
PRPF8-216	ENST00000577001	KRTAP19-8	Q3LI54	63 aa		5.68	□□□□□ -1.5
PRPF8-216	ENST00000577001	LCE2B	O14633	110 aa		5.66	□□□□□ -1.5
PRPF8-216	ENST00000577001	KRTAP8-1	Q8IUC2	63 aa		5.66	□□□□□ -1.5
PRPF8-216	ENST00000577001	KRTAP23-1	A1A580	65 aa		5.65	□□□□□ -1.51
PRPF8-216	ENST00000577001	KRTAP19-5	Q3LI72	72 aa		5.64	□□□□□ -1.51
PRPF8-216	ENST00000577001	DST	Q03001	7570 aa	Known RBP	5.63	□□□□□ -1.51
PRPF8-216	ENST00000577001	KRTAP4-7	Q9BYR0	210 aa		5.62	□□□□□ -1.51
PRPF8-216	ENST00000577001	LCE2A	Q5TA79	106 aa	Predicted RBP	5.56	□□□□□ -1.52
PRPF8-216	ENST00000577001	PRO2289	Q9P1D8	64 aa		5.51	□□□□□ -1.53
PRPF8-216	ENST00000577001	FCGBP	Q9Y6R7	5405 aa	Predicted RBP	5.46	□□□□□ -1.54
PRPF8-216	ENST00000577001	MUC12	Q9UKN1	5478 aa		5.46	□□□□□ -1.54
PRPF8-216	ENST00000577001	OBSCN	Q5VST9	7968 aa		5.44	□□□□□ -1.54
PRPF8-216	ENST00000577001	SSPO	A2VEC9	5147 aa		5.43	□□□□□ -1.54
PRPF8-216	ENST00000577001	KRTAP9-6	A8MVA2	160 aa		5.38	□□□□□ -1.55
PRPF8-216	ENST00000577001	SYNE1	Q8NF91	8797 aa	Known RBP	5.38	□□□□□ -1.55
PRPF8-216	ENST00000577001	CRCT1	Q9UGL9	99 aa		5.37	□□□□□ -1.55
PRPF8-216	ENST00000577001	LCE3C	Q5T5A8	94 aa		5.36	□□□□□ -1.55
PRPF8-216	ENST00000577001	KRTAP4-3	Q9BYR4	195 aa		5.25	□□□□□ -1.57
PRPF8-216	ENST00000577001	LOC100996750	A0A140TA64	210 aa		5.21	□□□□□ -1.57

Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms