RNA–Protein interactions for RNA: ENST00000575176.5

SMG6-216, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 557 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-216ENST00000575176 S4R3F8 94 aa3.97□□□□□ -1.77
SMG6-216ENST00000575176 LOC101927531A0A1B0GV80 90 aa3.96□□□□□ -1.78
SMG6-216ENST00000575176 C5orf47Q569G3 176 aa3.96□□□□□ -1.78
SMG6-216ENST00000575176 MT1BP07438 61 aa3.95□□□□□ -1.78
SMG6-216ENST00000575176 HIST1H4AP62805 103 aaKnown RBP3.95□□□□□ -1.78
SMG6-216ENST00000575176 UQCRQO14949 82 aa3.94□□□□□ -1.78
SMG6-216ENST00000575176 H0Y9P7 68 aa3.93□□□□□ -1.78
SMG6-216ENST00000575176 SPRR2GQ9BYE4 73 aa3.93□□□□□ -1.78
SMG6-216ENST00000575176 SYNE2Q8WXH0 6885 aaKnown RBP3.92□□□□□ -1.78
SMG6-216ENST00000575176 COX7CP15954 63 aa3.92□□□□□ -1.78
SMG6-216ENST00000575176 KLKP1Q107X0 134 aa3.92□□□□□ -1.78
SMG6-216ENST00000575176 KRTAP19-8Q3LI54 63 aa3.92□□□□□ -1.78
SMG6-216ENST00000575176 KRTAP9-7A8MTY7 169 aa3.9□□□□□ -1.79
SMG6-216ENST00000575176 FAM236AA0A1B0GUQ0 79 aa3.89□□□□□ -1.79
SMG6-216ENST00000575176 FAM236BA0A1B0GV22 79 aa3.89□□□□□ -1.79
SMG6-216ENST00000575176 ATOX1O00244 68 aa3.89□□□□□ -1.79
SMG6-216ENST00000575176 CSAG1Q6PB30 78 aa3.89□□□□□ -1.79
SMG6-216ENST00000575176 LINC00208Q96KT6 92 aa3.86□□□□□ -1.79
SMG6-216ENST00000575176 TMEM258P61165 79 aa3.85□□□□□ -1.79
SMG6-216ENST00000575176 SERP2Q8N6R1 65 aa3.85□□□□□ -1.79
SMG6-216ENST00000575176 H0YAA0 97 aa3.84□□□□□ -1.79
SMG6-216ENST00000575176 A8MUN3 132 aa3.83□□□□□ -1.8
SMG6-216ENST00000575176 DMAC1Q96GE9 116 aa3.81□□□□□ -1.8
SMG6-216ENST00000575176 H3BPC8 53 aa3.8□□□□□ -1.8
SMG6-216ENST00000575176 KRTAP10-5P60370 271 aa3.8□□□□□ -1.8
SMG6-216ENST00000575176 Q5VV11 94 aa3.79□□□□□ -1.8
SMG6-216ENST00000575176 CYSTM1Q9H1C7 97 aa3.79□□□□□ -1.8
SMG6-216ENST00000575176 MP68P56378 58 aa3.78□□□□□ -1.8
SMG6-216ENST00000575176 KRTAP3-2Q9BYR7 98 aa3.77□□□□□ -1.81
SMG6-216ENST00000575176 CRIPTQ9P021 101 aa3.77□□□□□ -1.81
SMG6-216ENST00000575176 NDUFC1O43677 76 aa3.76□□□□□ -1.81
SMG6-216ENST00000575176 SERP1Q9Y6X1 66 aa3.76□□□□□ -1.81
SMG6-216ENST00000575176 TRAV7A0A075B6U4 112 aa3.74□□□□□ -1.81
SMG6-216ENST00000575176 P0C880 135 aa3.74□□□□□ -1.81
SMG6-216ENST00000575176 KRTAP6-3Q3LI67 103 aa3.74□□□□□ -1.81
SMG6-216ENST00000575176 PRO0628Q9UI54 55 aa3.74□□□□□ -1.81
SMG6-216ENST00000575176 MUC12Q9UKN1 5478 aa3.74□□□□□ -1.81
SMG6-216ENST00000575176 SMIM26A0A096LP01 95 aa3.73□□□□□ -1.81
SMG6-216ENST00000575176 ADM2Q7Z4H4 148 aa3.73□□□□□ -1.81
SMG6-216ENST00000575176 A6NN06 94 aa3.72□□□□□ -1.81
SMG6-216ENST00000575176 KMT2DO14686 5537 aa3.71□□□□□ -1.82
SMG6-216ENST00000575176 H7BZZ5 65 aa3.71□□□□□ -1.82
SMG6-216ENST00000575176 MT1XP80297 61 aa3.7□□□□□ -1.82
SMG6-216ENST00000575176 C20orf197Q8N268 126 aa3.7□□□□□ -1.82
SMG6-216ENST00000575176 NEBP20929 6669 aa3.7□□□□□ -1.82
SMG6-216ENST00000575176 ATP5EP56381 51 aaPredicted RBP3.69□□□□□ -1.82
SMG6-216ENST00000575176 MDN1Q9NU22 5596 aa3.66□□□□□ -1.82
SMG6-216ENST00000575176 KRTAP5-9P26371 169 aa3.66□□□□□ -1.82
SMG6-216ENST00000575176 SNURFQ9Y675 71 aa3.65□□□□□ -1.83
SMG6-216ENST00000575176 SPANXA2-OT1Q8N9U9 137 aa3.61□□□□□ -1.83
SMG6-216ENST00000575176 ACYP2P14621 99 aa3.6□□□□□ -1.83
SMG6-216ENST00000575176 R4GN34 69 aa3.6□□□□□ -1.83
SMG6-216ENST00000575176 M0QZ58 72 aa3.59□□□□□ -1.83
SMG6-216ENST00000575176 V9GYY9 64 aa3.59□□□□□ -1.83
SMG6-216ENST00000575176 SEC61GP60059 68 aa3.58□□□□□ -1.84
SMG6-216ENST00000575176 KRTAP12-2P59991 146 aa3.57□□□□□ -1.84
SMG6-216ENST00000575176 KRTAP13-4Q3LI77 160 aa3.57□□□□□ -1.84
SMG6-216ENST00000575176 Q1T7F1 81 aa3.56□□□□□ -1.84
SMG6-216ENST00000575176 BRK1Q8WUW1 75 aa3.56□□□□□ -1.84
SMG6-216ENST00000575176 PMAIP1Q13794 54 aa3.53□□□□□ -1.84
SMG6-216ENST00000575176 PRO2289Q9P1D8 64 aa3.52□□□□□ -1.85
SMG6-216ENST00000575176 KRTAP10-7P60409 375 aaPredicted RBP3.51□□□□□ -1.85
SMG6-216ENST00000575176 PLAC4Q8WY50 150 aa3.51□□□□□ -1.85
SMG6-216ENST00000575176 KRTAP4-8A0A0G2JLE6 195 aa3.5□□□□□ -1.85
SMG6-216ENST00000575176 KRTAP10-12P60413 245 aa3.5□□□□□ -1.85
SMG6-216ENST00000575176 LINC01554Q52M75 96 aa3.5□□□□□ -1.85
SMG6-216ENST00000575176 COA5Q86WW8 74 aa3.5□□□□□ -1.85
SMG6-216ENST00000575176 KRTAP4-8Q9BYQ9 185 aa3.5□□□□□ -1.85
SMG6-216ENST00000575176 SPTSSBQ8NFR3 76 aa3.49□□□□□ -1.85
SMG6-216ENST00000575176 CHKB-CPT1BH3BT56 60 aa3.48□□□□□ -1.85
SMG6-216ENST00000575176 SPRR2FQ96RM1 72 aa3.46□□□□□ -1.86
SMG6-216ENST00000575176 LCE1AQ5T7P2 110 aa3.44□□□□□ -1.86
SMG6-216ENST00000575176 KRTAP8-1Q8IUC2 63 aa3.44□□□□□ -1.86
SMG6-216ENST00000575176 PSPHP1O15172 72 aa3.42□□□□□ -1.86
SMG6-216ENST00000575176 KRTAP20-1Q3LI63 56 aa3.39□□□□□ -1.87
SMG6-216ENST00000575176 SPRR2EP22531 72 aa3.38□□□□□ -1.87
SMG6-216ENST00000575176 SPRR2BP35325 72 aa3.38□□□□□ -1.87
SMG6-216ENST00000575176 SPRR2AP35326 72 aa3.38□□□□□ -1.87
SMG6-216ENST00000575176 KTN1-AS1Q86SY8 53 aa3.38□□□□□ -1.87
SMG6-216ENST00000575176 SPATA8Q6RVD6 105 aa3.35□□□□□ -1.87
SMG6-216ENST00000575176 LINC01558Q9Y6Z2 57 aa3.35□□□□□ -1.87
SMG6-216ENST00000575176 A8MU10 97 aa3.34□□□□□ -1.87
SMG6-216ENST00000575176 KRTAP12-1P59990 96 aa3.34□□□□□ -1.87
SMG6-216ENST00000575176 PRR15LQ9BU68 103 aa3.34□□□□□ -1.87
SMG6-216ENST00000575176 CDC42SE1Q9NRR8 79 aa3.34□□□□□ -1.87
SMG6-216ENST00000575176 KRTAP19-7Q3SYF9 63 aa3.33□□□□□ -1.88
SMG6-216ENST00000575176 A0A1B0GU33 70 aa3.31□□□□□ -1.88
SMG6-216ENST00000575176 A6NED7 52 aa3.31□□□□□ -1.88
SMG6-216ENST00000575176 KRTAP2-3P0C7H8 128 aa3.31□□□□□ -1.88
SMG6-216ENST00000575176 KRTAP2-4Q9BYR9 128 aa3.31□□□□□ -1.88
SMG6-216ENST00000575176 A0A0D9SG42 100 aa3.3□□□□□ -1.88
SMG6-216ENST00000575176 MT1EP04732 61 aa3.27□□□□□ -1.89
SMG6-216ENST00000575176 SPRR2DP22532 72 aa3.27□□□□□ -1.89
SMG6-216ENST00000575176 CAMK2N1Q7Z7J9 78 aa3.27□□□□□ -1.89
SMG6-216ENST00000575176 A0A1B0GU69 56 aa3.24□□□□□ -1.89
SMG6-216ENST00000575176 LCE5AQ5TCM9 118 aa3.24□□□□□ -1.89
SMG6-216ENST00000575176 SPINT4Q6UDR6 99 aa3.21□□□□□ -1.9
SMG6-216ENST00000575176 KRTAP2-2Q9BYT5 123 aa3.21□□□□□ -1.9
SMG6-216ENST00000575176 KRTAP2-1Q9BYU5 128 aa3.21□□□□□ -1.9
SMG6-216ENST00000575176 C10orf95Q9H7T3 257 aa3.2□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms