RNA–Protein interactions for RNA: ENST00000575112.5

RPAIN-215, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 3,817 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-215ENST00000575112 FAT3Q8TDW7 4589 aa4.56□□□□□ -1.68
RPAIN-215ENST00000575112 A8MUU9 505 aa4.55□□□□□ -1.68
RPAIN-215ENST00000575112 KIAA1109Q2LD37 5005 aa4.51□□□□□ -1.69
RPAIN-215ENST00000575112 KMT2CQ8NEZ4 4911 aaKnown RBP4.51□□□□□ -1.69
RPAIN-215ENST00000575112 S4R3F8 94 aa4.51□□□□□ -1.69
RPAIN-215ENST00000575112 KRTAP25-1Q3LHN0 102 aa4.5□□□□□ -1.69
RPAIN-215ENST00000575112 H1FX-AS1Q4G0G2 97 aa4.47□□□□□ -1.69
RPAIN-215ENST00000575112 A0A1B0GVY2 172 aa4.47□□□□□ -1.69
RPAIN-215ENST00000575112 ROMO1P60602 79 aa4.46□□□□□ -1.7
RPAIN-215ENST00000575112 RYR1P21817 5038 aa4.45□□□□□ -1.7
RPAIN-215ENST00000575112 P0C880 135 aa4.45□□□□□ -1.7
RPAIN-215ENST00000575112 KRTAP13-4Q3LI77 160 aa4.44□□□□□ -1.7
RPAIN-215ENST00000575112 C20orf166-AS1Q96NR2 134 aa4.44□□□□□ -1.7
RPAIN-215ENST00000575112 KRTAP10-8P60410 259 aa4.43□□□□□ -1.7
RPAIN-215ENST00000575112 C10orf95Q9H7T3 257 aa4.43□□□□□ -1.7
RPAIN-215ENST00000575112 CAMK2N1Q7Z7J9 78 aa4.43□□□□□ -1.7
RPAIN-215ENST00000575112 R4GN34 69 aa4.43□□□□□ -1.7
RPAIN-215ENST00000575112 RPL37P61927 97 aaKnown RBP4.42□□□□□ -1.7
RPAIN-215ENST00000575112 XP32Q5T750 250 aa4.41□□□□□ -1.7
RPAIN-215ENST00000575112 TNXBP22105 4242 aa4.4□□□□□ -1.7
RPAIN-215ENST00000575112 M0QZ58 72 aa4.4□□□□□ -1.7
RPAIN-215ENST00000575112 RYR3Q15413 4870 aa4.4□□□□□ -1.7
RPAIN-215ENST00000575112 M0R2T5 61 aa4.4□□□□□ -1.71
RPAIN-215ENST00000575112 LRP2P98164 4655 aa4.39□□□□□ -1.71
RPAIN-215ENST00000575112 TPRXLQ17RH7 258 aa4.38□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP3-3Q9BYR6 98 aa4.38□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP3-2Q9BYR7 98 aa4.38□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP10-4P60372 401 aaPredicted RBP4.37□□□□□ -1.71
RPAIN-215ENST00000575112 RPS29P62273 56 aaKnown RBP4.37□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP10-6P60371 365 aaPredicted RBP4.36□□□□□ -1.71
RPAIN-215ENST00000575112 LCE2DQ5TA82 110 aaPredicted RBP4.36□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP4-5Q9BYR2 181 aa4.35□□□□□ -1.71
RPAIN-215ENST00000575112 KRTAP17-1Q9BYP8 105 aa4.34□□□□□ -1.72
RPAIN-215ENST00000575112 RYR2Q92736 4967 aa4.3□□□□□ -1.72
RPAIN-215ENST00000575112 SEC61BP60468 96 aaKnown RBP4.29□□□□□ -1.72
RPAIN-215ENST00000575112 KRTAP12-2P59991 146 aa4.28□□□□□ -1.72
RPAIN-215ENST00000575112 ABCA13Q86UQ4 5058 aa4.28□□□□□ -1.73
RPAIN-215ENST00000575112 NDUFAF8A1L188 74 aa4.24□□□□□ -1.73
RPAIN-215ENST00000575112 EPPK1P58107 5090 aaKnown RBP4.24□□□□□ -1.73
RPAIN-215ENST00000575112 MT1HL1P0DM35 61 aa4.24□□□□□ -1.73
RPAIN-215ENST00000575112 MUC2Q02817 5179 aa4.2□□□□□ -1.74
RPAIN-215ENST00000575112 LUZP6Q538Z0 58 aa4.19□□□□□ -1.74
RPAIN-215ENST00000575112 KRTAP15-1Q3LI76 137 aa4.17□□□□□ -1.74
RPAIN-215ENST00000575112 KRTAP12-1P59990 96 aa4.16□□□□□ -1.74
RPAIN-215ENST00000575112 HERC2O95714 4834 aa4.1□□□□□ -1.75
RPAIN-215ENST00000575112 LORP23490 312 aaPredicted RBP4.07□□□□□ -1.76
RPAIN-215ENST00000575112 PLAC4Q8WY50 150 aa4.04□□□□□ -1.76
RPAIN-215ENST00000575112 KRTAP4-1Q9BYQ7 146 aa4.04□□□□□ -1.76
RPAIN-215ENST00000575112 MUC17Q685J3 4493 aa4.02□□□□□ -1.77
RPAIN-215ENST00000575112 RNF213Q63HN8 5207 aa4.02□□□□□ -1.77
RPAIN-215ENST00000575112 HERC1Q15751 4861 aa3.99□□□□□ -1.77
RPAIN-215ENST00000575112 FAT4Q6V0I7 4981 aa3.97□□□□□ -1.77
RPAIN-215ENST00000575112 PCLOQ9Y6V0 5065 aa3.96□□□□□ -1.78
RPAIN-215ENST00000575112 TNP1P09430 55 aa3.94□□□□□ -1.78
RPAIN-215ENST00000575112 KRTAP10-10P60014 251 aa3.92□□□□□ -1.78
RPAIN-215ENST00000575112 UBR4Q5T4S7 5183 aa3.86□□□□□ -1.79
RPAIN-215ENST00000575112 BIRC6Q9NR09 4857 aa3.86□□□□□ -1.79
RPAIN-215ENST00000575112 LCE2BO14633 110 aa3.84□□□□□ -1.8
RPAIN-215ENST00000575112 FLGP20930 4061 aaPredicted RBP3.83□□□□□ -1.8
RPAIN-215ENST00000575112 LCE2CQ5TA81 110 aa3.82□□□□□ -1.8
RPAIN-215ENST00000575112 HMCN2Q8NDA2 5059 aa3.75□□□□□ -1.81
RPAIN-215ENST00000575112 FSIP2Q5CZC0 6907 aa3.75□□□□□ -1.81
RPAIN-215ENST00000575112 PP632Q6XCG6 107 aa3.73□□□□□ -1.81
RPAIN-215ENST00000575112 KRTAP19-2Q3LHN2 52 aa3.73□□□□□ -1.81
RPAIN-215ENST00000575112 LCE2AQ5TA79 106 aaPredicted RBP3.67□□□□□ -1.82
RPAIN-215ENST00000575112 USH2AO75445 5202 aa3.6□□□□□ -1.83
RPAIN-215ENST00000575112 MT1HP80294 61 aa3.58□□□□□ -1.84
RPAIN-215ENST00000575112 MT1FP04733 61 aa3.57□□□□□ -1.84
RPAIN-215ENST00000575112 LCE3AQ5TA76 89 aa3.55□□□□□ -1.84
RPAIN-215ENST00000575112 MT2AP02795 61 aa3.54□□□□□ -1.84
RPAIN-215ENST00000575112 KMT2DO14686 5537 aa3.54□□□□□ -1.84
RPAIN-215ENST00000575112 PRO2289Q9P1D8 64 aa3.53□□□□□ -1.84
RPAIN-215ENST00000575112 KRTAP19-1Q8IUB9 90 aa3.52□□□□□ -1.85
RPAIN-215ENST00000575112 SPRR5A0A1B0GTR4 108 aa3.51□□□□□ -1.85
RPAIN-215ENST00000575112 KRTAP23-1A1A580 65 aa3.5□□□□□ -1.85
RPAIN-215ENST00000575112 KRTAP10-12P60413 245 aa3.42□□□□□ -1.86
RPAIN-215ENST00000575112 SPRR2GQ9BYE4 73 aa3.42□□□□□ -1.86
RPAIN-215ENST00000575112 KRTAP9-8Q9BYQ0 159 aa3.41□□□□□ -1.86
RPAIN-215ENST00000575112 CRCT1Q9UGL9 99 aa3.41□□□□□ -1.86
RPAIN-215ENST00000575112 OBSCNQ5VST9 7968 aa3.39□□□□□ -1.87
RPAIN-215ENST00000575112 KRTAP12-3P60328 96 aa3.38□□□□□ -1.87
RPAIN-215ENST00000575112 KRTAP10-7P60409 375 aaPredicted RBP3.37□□□□□ -1.87
RPAIN-215ENST00000575112 INE1O15225 51 aa3.37□□□□□ -1.87
RPAIN-215ENST00000575112 MT1BP07438 61 aa3.33□□□□□ -1.88
RPAIN-215ENST00000575112 DSTQ03001 7570 aaKnown RBP3.32□□□□□ -1.88
RPAIN-215ENST00000575112 KRTAP4-8A0A0G2JLE6 195 aa3.32□□□□□ -1.88
RPAIN-215ENST00000575112 KRTAP4-8Q9BYQ9 185 aa3.32□□□□□ -1.88
RPAIN-215ENST00000575112 MT1XP80297 61 aa3.31□□□□□ -1.88
RPAIN-215ENST00000575112 KRTAP10-5P60370 271 aa3.3□□□□□ -1.88
RPAIN-215ENST00000575112 KRTAP8-1Q8IUC2 63 aa3.26□□□□□ -1.89
RPAIN-215ENST00000575112 LOC100996750A0A140TA64 210 aa3.26□□□□□ -1.89
RPAIN-215ENST00000575112 KRTAP4-6Q9BYQ5 205 aa3.26□□□□□ -1.89
RPAIN-215ENST00000575112 KRTAP19-5Q3LI72 72 aa3.25□□□□□ -1.89
RPAIN-215ENST00000575112 KRTAP9-3Q9BYQ3 159 aa3.25□□□□□ -1.89
RPAIN-215ENST00000575112 SYNE1Q8NF91 8797 aaKnown RBP3.25□□□□□ -1.89
RPAIN-215ENST00000575112 FCGBPQ9Y6R7 5405 aaPredicted RBP3.24□□□□□ -1.89
RPAIN-215ENST00000575112 KRTAP19-8Q3LI54 63 aa3.22□□□□□ -1.89
RPAIN-215ENST00000575112 KRTAP4-7Q9BYR0 210 aa3.2□□□□□ -1.9
RPAIN-215ENST00000575112 KRTAP9-6A8MVA2 160 aa3.14□□□□□ -1.91
RPAIN-215ENST00000575112 MUC12Q9UKN1 5478 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 167.1 ms