RNA–Protein interactions for RNA: ENST00000573992.5

EDC4-207, Transcript of enhancer of mRNA decapping 4, humanhuman

TSL 1 (best)

Gene EDC4, Length 3,934 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EDC4-207ENST00000573992 KRTAP3-2Q9BYR7 98 aa5.76□□□□□ -1.49
EDC4-207ENST00000573992 DNAH17Q9UFH2 4485 aa5.75□□□□□ -1.49
EDC4-207ENST00000573992 VPS13DQ5THJ4 4388 aa5.75□□□□□ -1.49
EDC4-207ENST00000573992 DNAH11Q96DT5 4516 aa5.74□□□□□ -1.49
EDC4-207ENST00000573992 PP632Q6XCG6 107 aa5.73□□□□□ -1.49
EDC4-207ENST00000573992 DNAH2Q9P225 4427 aa5.73□□□□□ -1.49
EDC4-207ENST00000573992 SEC61BP60468 96 aaKnown RBP5.72□□□□□ -1.49
EDC4-207ENST00000573992 HECTD4Q9Y4D8 3996 aa5.72□□□□□ -1.49
EDC4-207ENST00000573992 KRTAP3-3Q9BYR6 98 aa5.71□□□□□ -1.49
EDC4-207ENST00000573992 HYDINQ4G0P3 5121 aa5.69□□□□□ -1.5
EDC4-207ENST00000573992 DNAH6Q9C0G6 4158 aa5.66□□□□□ -1.5
EDC4-207ENST00000573992 LRP1BQ9NZR2 4599 aa5.65□□□□□ -1.51
EDC4-207ENST00000573992 Q5VSD8 79 aa5.6□□□□□ -1.51
EDC4-207ENST00000573992 KMT2CQ8NEZ4 4911 aaKnown RBP5.58□□□□□ -1.52
EDC4-207ENST00000573992 SACSQ9NZJ4 4579 aa5.58□□□□□ -1.52
EDC4-207ENST00000573992 DNAH5Q8TE73 4624 aa5.57□□□□□ -1.52
EDC4-207ENST00000573992 J3QL48 77 aa5.55□□□□□ -1.52
EDC4-207ENST00000573992 TNP1P09430 55 aa5.55□□□□□ -1.52
EDC4-207ENST00000573992 PKHD1P08F94 4074 aa5.53□□□□□ -1.52
EDC4-207ENST00000573992 VPS13BQ7Z7G8 4022 aa5.51□□□□□ -1.53
EDC4-207ENST00000573992 PKD1P98161 4303 aa5.5□□□□□ -1.53
EDC4-207ENST00000573992 FAT2Q9NYQ8 4349 aa5.5□□□□□ -1.53
EDC4-207ENST00000573992 FAT1Q14517 4588 aa5.44□□□□□ -1.54
EDC4-207ENST00000573992 RYR2Q92736 4967 aa5.44□□□□□ -1.54
EDC4-207ENST00000573992 DYNC1H1Q14204 4646 aaKnown RBP5.42□□□□□ -1.54
EDC4-207ENST00000573992 RYR3Q15413 4870 aa5.4□□□□□ -1.55
EDC4-207ENST00000573992 A0A1B0GVY2 172 aa5.4□□□□□ -1.55
EDC4-207ENST00000573992 APOBP04114 4563 aaKnown RBP5.29□□□□□ -1.56
EDC4-207ENST00000573992 KIAA1109Q2LD37 5005 aa5.29□□□□□ -1.56
EDC4-207ENST00000573992 KRTAP10-4P60372 401 aaPredicted RBP5.29□□□□□ -1.56
EDC4-207ENST00000573992 MYCBP2O75592 4640 aa5.28□□□□□ -1.56
EDC4-207ENST00000573992 PRO2289Q9P1D8 64 aa5.25□□□□□ -1.57
EDC4-207ENST00000573992 EPPK1P58107 5090 aaKnown RBP5.24□□□□□ -1.57
EDC4-207ENST00000573992 LRP1Q07954 4544 aaKnown RBP5.21□□□□□ -1.58
EDC4-207ENST00000573992 M0R2T5 61 aa5.2□□□□□ -1.58
EDC4-207ENST00000573992 HSPG2P98160 4391 aa5.18□□□□□ -1.58
EDC4-207ENST00000573992 INE1O15225 51 aa5.17□□□□□ -1.58
EDC4-207ENST00000573992 LORP23490 312 aaPredicted RBP5.16□□□□□ -1.58
EDC4-207ENST00000573992 KRTAP17-1Q9BYP8 105 aa5.16□□□□□ -1.58
EDC4-207ENST00000573992 RYR1P21817 5038 aa5.16□□□□□ -1.58
EDC4-207ENST00000573992 KRTAP4-5Q9BYR2 181 aa5.1□□□□□ -1.59
EDC4-207ENST00000573992 PKHD1L1Q86WI1 4243 aa5.09□□□□□ -1.59
EDC4-207ENST00000573992 KRTAP23-1A1A580 65 aa5.08□□□□□ -1.6
EDC4-207ENST00000573992 FAT3Q8TDW7 4589 aa5.07□□□□□ -1.6
EDC4-207ENST00000573992 MT1HL1P0DM35 61 aa5.03□□□□□ -1.6
EDC4-207ENST00000573992 TNXBP22105 4242 aa4.99□□□□□ -1.61
EDC4-207ENST00000573992 LRP2P98164 4655 aa4.96□□□□□ -1.62
EDC4-207ENST00000573992 HERC2O95714 4834 aa4.95□□□□□ -1.62
EDC4-207ENST00000573992 ABCA13Q86UQ4 5058 aa4.95□□□□□ -1.62
EDC4-207ENST00000573992 BIRC6Q9NR09 4857 aa4.91□□□□□ -1.62
EDC4-207ENST00000573992 LPAP08519 4548 aa4.91□□□□□ -1.62
EDC4-207ENST00000573992 SPRR5A0A1B0GTR4 108 aa4.87□□□□□ -1.63
EDC4-207ENST00000573992 LCE3AQ5TA76 89 aa4.84□□□□□ -1.63
EDC4-207ENST00000573992 KRTAP10-10P60014 251 aa4.82□□□□□ -1.64
EDC4-207ENST00000573992 PCLOQ9Y6V0 5065 aa4.79□□□□□ -1.64
EDC4-207ENST00000573992 HERC1Q15751 4861 aa4.78□□□□□ -1.64
EDC4-207ENST00000573992 KRTAP12-3P60328 96 aa4.72□□□□□ -1.65
EDC4-207ENST00000573992 KRTAP4-1Q9BYQ7 146 aa4.72□□□□□ -1.65
EDC4-207ENST00000573992 KRTAP10-12P60413 245 aa4.65□□□□□ -1.66
EDC4-207ENST00000573992 MUC2Q02817 5179 aa4.65□□□□□ -1.67
EDC4-207ENST00000573992 KRTAP8-1Q8IUC2 63 aa4.58□□□□□ -1.68
EDC4-207ENST00000573992 HMCN2Q8NDA2 5059 aa4.54□□□□□ -1.68
EDC4-207ENST00000573992 SPRR2GQ9BYE4 73 aa4.54□□□□□ -1.68
EDC4-207ENST00000573992 RNF213Q63HN8 5207 aa4.54□□□□□ -1.68
EDC4-207ENST00000573992 UBR4Q5T4S7 5183 aa4.52□□□□□ -1.69
EDC4-207ENST00000573992 MUC17Q685J3 4493 aa4.49□□□□□ -1.69
EDC4-207ENST00000573992 FAT4Q6V0I7 4981 aa4.45□□□□□ -1.7
EDC4-207ENST00000573992 KRTAP19-1Q8IUB9 90 aa4.41□□□□□ -1.7
EDC4-207ENST00000573992 KRTAP19-2Q3LHN2 52 aa4.41□□□□□ -1.7
EDC4-207ENST00000573992 FLGP20930 4061 aaPredicted RBP4.33□□□□□ -1.72
EDC4-207ENST00000573992 LCE3CQ5T5A8 94 aa4.31□□□□□ -1.72
EDC4-207ENST00000573992 MT2AP02795 61 aa4.29□□□□□ -1.72
EDC4-207ENST00000573992 MT1FP04733 61 aa4.28□□□□□ -1.72
EDC4-207ENST00000573992 KRTAP19-5Q3LI72 72 aa4.24□□□□□ -1.73
EDC4-207ENST00000573992 LCE2CQ5TA81 110 aa4.23□□□□□ -1.73
EDC4-207ENST00000573992 KRTAP10-7P60409 375 aaPredicted RBP4.22□□□□□ -1.73
EDC4-207ENST00000573992 MT1HP80294 61 aa4.22□□□□□ -1.73
EDC4-207ENST00000573992 MT1XP80297 61 aa4.22□□□□□ -1.73
EDC4-207ENST00000573992 KRTAP19-8Q3LI54 63 aa4.22□□□□□ -1.73
EDC4-207ENST00000573992 KRTAP10-5P60370 271 aa4.21□□□□□ -1.73
EDC4-207ENST00000573992 MT1BP07438 61 aa4.13□□□□□ -1.75
EDC4-207ENST00000573992 CRCT1Q9UGL9 99 aa4.07□□□□□ -1.76
EDC4-207ENST00000573992 KRTAP9-8Q9BYQ0 159 aa4.04□□□□□ -1.76
EDC4-207ENST00000573992 FSIP2Q5CZC0 6907 aa4.01□□□□□ -1.77
EDC4-207ENST00000573992 KRTAP12-4P60329 112 aa3.98□□□□□ -1.77
EDC4-207ENST00000573992 KRTAP19-4Q3LI73 84 aa3.98□□□□□ -1.77
EDC4-207ENST00000573992 OBSCNQ5VST9 7968 aa3.96□□□□□ -1.78
EDC4-207ENST00000573992 USH2AO75445 5202 aa3.92□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP2-3P0C7H8 128 aa3.92□□□□□ -1.78
EDC4-207ENST00000573992 LCE2AQ5TA79 106 aaPredicted RBP3.92□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP2-4Q9BYR9 128 aa3.92□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP2-1Q9BYU5 128 aa3.92□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP4-8A0A0G2JLE6 195 aa3.91□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP4-8Q9BYQ9 185 aa3.91□□□□□ -1.78
EDC4-207ENST00000573992 KRTAP4-7Q9BYR0 210 aa3.9□□□□□ -1.79
EDC4-207ENST00000573992 KRTAP9-3Q9BYQ3 159 aa3.86□□□□□ -1.79
EDC4-207ENST00000573992 KRTAP9-6A8MVA2 160 aa3.86□□□□□ -1.79
EDC4-207ENST00000573992 KMT2DO14686 5537 aa3.85□□□□□ -1.79
EDC4-207ENST00000573992 LCE2BO14633 110 aa3.8□□□□□ -1.8
EDC4-207ENST00000573992 SYNE1Q8NF91 8797 aaKnown RBP3.8□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 83.5 ms