RNA–Protein interactions for RNA: ENST00000573795.5

SNF8-216, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-216ENST00000573795 SPRR2FQ96RM1 72 aa9.33□□□□□ -0.92
SNF8-216ENST00000573795 H0YAA0 97 aa9.3□□□□□ -0.92
SNF8-216ENST00000573795 K7EP34 96 aa9.28□□□□□ -0.92
SNF8-216ENST00000573795 SPRR2EP22531 72 aa9.28□□□□□ -0.92
SNF8-216ENST00000573795 SPRR2BP35325 72 aa9.28□□□□□ -0.92
SNF8-216ENST00000573795 SPRR2AP35326 72 aa9.28□□□□□ -0.92
SNF8-216ENST00000573795 MT1XP80297 61 aa9.28□□□□□ -0.92
SNF8-216ENST00000573795 TRAV22A0A0B4J277 110 aa9.27□□□□□ -0.93
SNF8-216ENST00000573795 LOC101927531A0A1B0GV80 90 aa9.27□□□□□ -0.93
SNF8-216ENST00000573795 LOC105371267A0A1B0GV96 52 aa9.23□□□□□ -0.93
SNF8-216ENST00000573795 NDUFC1O43677 76 aa9.21□□□□□ -0.94
SNF8-216ENST00000573795 COL5A1-AS1Q5SY13 56 aa9.19□□□□□ -0.94
SNF8-216ENST00000573795 PRO2289Q9P1D8 64 aa9.19□□□□□ -0.94
SNF8-216ENST00000573795 A8MUN3 132 aa9.18□□□□□ -0.94
SNF8-216ENST00000573795 ADM2Q7Z4H4 148 aa9.18□□□□□ -0.94
SNF8-216ENST00000573795 LCE1AQ5T7P2 110 aa9.15□□□□□ -0.94
SNF8-216ENST00000573795 KRTAP8-1Q8IUC2 63 aa9.15□□□□□ -0.94
SNF8-216ENST00000573795 ETDBQ3ZM63 59 aa9.12□□□□□ -0.95
SNF8-216ENST00000573795 KRTAP12-2P59991 146 aa9.1□□□□□ -0.95
SNF8-216ENST00000573795 H0Y9P7 68 aa9.08□□□□□ -0.96
SNF8-216ENST00000573795 KRTAP2-2Q9BYT5 123 aa9.07□□□□□ -0.96
SNF8-216ENST00000573795 KRTAP2-1Q9BYU5 128 aa9.07□□□□□ -0.96
SNF8-216ENST00000573795 F8W1H4 67 aa9.06□□□□□ -0.96
SNF8-216ENST00000573795 UQCRQO14949 82 aa9.06□□□□□ -0.96
SNF8-216ENST00000573795 PLAC4Q8WY50 150 aa9.06□□□□□ -0.96
SNF8-216ENST00000573795 ACYP1P07311 99 aa9.04□□□□□ -0.96
SNF8-216ENST00000573795 ATOX1O00244 68 aa9.03□□□□□ -0.96
SNF8-216ENST00000573795 GTF2H5Q6ZYL4 71 aa9.03□□□□□ -0.96
SNF8-216ENST00000573795 KRTAP4-8A0A0G2JLE6 195 aa9.01□□□□□ -0.97
SNF8-216ENST00000573795 KRTAP4-8Q9BYQ9 185 aa9.01□□□□□ -0.97
SNF8-216ENST00000573795 P0C880 135 aa8.97□□□□□ -0.97
SNF8-216ENST00000573795 SPRR2DP22532 72 aa8.97□□□□□ -0.97
SNF8-216ENST00000573795 R4GN34 69 aa8.95□□□□□ -0.98
SNF8-216ENST00000573795 HIST1H4AP62805 103 aaKnown RBP8.94□□□□□ -0.98
SNF8-216ENST00000573795 ATP5EP2Q5VTU8 51 aa8.93□□□□□ -0.98
SNF8-216ENST00000573795 LINC00208Q96KT6 92 aa8.89□□□□□ -0.99
SNF8-216ENST00000573795 M0QZ58 72 aa8.88□□□□□ -0.99
SNF8-216ENST00000573795 FAM240AA0A1B0GVK7 77 aa8.86□□□□□ -0.99
SNF8-216ENST00000573795 KRTAP10-7P60409 375 aaPredicted RBP8.84□□□□□ -0.99
SNF8-216ENST00000573795 KRTAP3-2Q9BYR7 98 aa8.84□□□□□ -0.99
SNF8-216ENST00000573795 C20orf197Q8N268 126 aa8.82□□□□□ -1
SNF8-216ENST00000573795 KRTAP10-12P60413 245 aa8.79□□□□□ -1
SNF8-216ENST00000573795 LCE3BQ5TA77 95 aa8.77□□□□□ -1.01
SNF8-216ENST00000573795 OCR1Q9BZK8 76 aa8.77□□□□□ -1.01
SNF8-216ENST00000573795 LINC01554Q52M75 96 aa8.76□□□□□ -1.01
SNF8-216ENST00000573795 MP68P56378 58 aa8.73□□□□□ -1.01
SNF8-216ENST00000573795 DMAC1Q96GE9 116 aa8.7□□□□□ -1.02
SNF8-216ENST00000573795 PCP4L1A6NKN8 68 aa8.68□□□□□ -1.02
SNF8-216ENST00000573795 LINC00643Q86TS7 51 aa8.68□□□□□ -1.02
SNF8-216ENST00000573795 H3BPC8 53 aa8.57□□□□□ -1.04
SNF8-216ENST00000573795 GPR98Q8WXG9 6306 aa8.53□□□□□ -1.04
SNF8-216ENST00000573795 MT-ATP8P03928 68 aa8.47□□□□□ -1.05
SNF8-216ENST00000573795 TRAV7A0A075B6U4 112 aa8.46□□□□□ -1.06
SNF8-216ENST00000573795 DSTQ03001 7570 aaKnown RBP8.46□□□□□ -1.06
SNF8-216ENST00000573795 ACYP2P14621 99 aa8.34□□□□□ -1.07
SNF8-216ENST00000573795 LCE5AQ5TCM9 118 aa8.33□□□□□ -1.08
SNF8-216ENST00000573795 SCGB1A1P11684 91 aa8.31□□□□□ -1.08
SNF8-216ENST00000573795 KRTAP19-7Q3SYF9 63 aa8.31□□□□□ -1.08
SNF8-216ENST00000573795 KRTAP4-9Q9BYQ8 210 aa8.29□□□□□ -1.08
SNF8-216ENST00000573795 SPTSSBQ8NFR3 76 aa8.28□□□□□ -1.08
SNF8-216ENST00000573795 KRTAP13-4Q3LI77 160 aa8.25□□□□□ -1.09
SNF8-216ENST00000573795 MT1EP04732 61 aa8.24□□□□□ -1.09
SNF8-216ENST00000573795 KRTAP19-3Q7Z4W3 81 aa8.23□□□□□ -1.09
SNF8-216ENST00000573795 A0A1B0GV90 55 aa8.16□□□□□ -1.1
SNF8-216ENST00000573795 CHKB-CPT1BH3BT56 60 aa8.16□□□□□ -1.1
SNF8-216ENST00000573795 CAMK2N1Q7Z7J9 78 aa8.14□□□□□ -1.11
SNF8-216ENST00000573795 J3QR89 54 aa8.09□□□□□ -1.11
SNF8-216ENST00000573795 LCE1DQ5T752 114 aa8.06□□□□□ -1.12
SNF8-216ENST00000573795 HMCN1Q96RW7 5635 aa8.05□□□□□ -1.12
SNF8-216ENST00000573795 CYSTM1Q9H1C7 97 aa8.04□□□□□ -1.12
SNF8-216ENST00000573795 SMIM20Q8N5G0 67 aa7.99□□□□□ -1.13
SNF8-216ENST00000573795 SNURFQ9Y675 71 aa7.97□□□□□ -1.13
SNF8-216ENST00000573795 MT1GP13640 62 aa7.96□□□□□ -1.14
SNF8-216ENST00000573795 KRTAP19-5Q3LI72 72 aa7.96□□□□□ -1.14
SNF8-216ENST00000573795 A0A0D9SG42 100 aa7.93□□□□□ -1.14
SNF8-216ENST00000573795 AHNAK2Q8IVF2 5795 aa7.92□□□□□ -1.14
SNF8-216ENST00000573795 SPANXA2-OT1Q8N9U9 137 aa7.91□□□□□ -1.14
SNF8-216ENST00000573795 LCE4AQ5TA78 99 aa7.9□□□□□ -1.14
SNF8-216ENST00000573795 MT4P47944 62 aa7.89□□□□□ -1.15
SNF8-216ENST00000573795 MT1MQ8N339 61 aa7.87□□□□□ -1.15
SNF8-216ENST00000573795 PP632Q6XCG6 107 aa7.85□□□□□ -1.15
SNF8-216ENST00000573795 MT1LQ93083 61 aa7.8□□□□□ -1.16
SNF8-216ENST00000573795 SPATA8Q6RVD6 105 aa7.78□□□□□ -1.16
SNF8-216ENST00000573795 SPINT4Q6UDR6 99 aa7.76□□□□□ -1.17
SNF8-216ENST00000573795 K7ERU9 68 aa7.75□□□□□ -1.17
SNF8-216ENST00000573795 KRTAP5-4Q6L8H1 288 aa7.75□□□□□ -1.17
SNF8-216ENST00000573795 KRTAP12-1P59990 96 aa7.74□□□□□ -1.17
SNF8-216ENST00000573795 COA5Q86WW8 74 aa7.73□□□□□ -1.17
SNF8-216ENST00000573795 KRTAP4-3Q9BYR4 195 aa7.73□□□□□ -1.17
SNF8-216ENST00000573795 KRTAP5-10Q6L8G5 202 aa7.7□□□□□ -1.18
SNF8-216ENST00000573795 KRTAP4-6Q9BYQ5 205 aa7.67□□□□□ -1.18
SNF8-216ENST00000573795 SERP1Q9Y6X1 66 aa7.67□□□□□ -1.18
SNF8-216ENST00000573795 SEC61GP60059 68 aa7.65□□□□□ -1.18
SNF8-216ENST00000573795 A0A1B0GU33 70 aa7.64□□□□□ -1.19
SNF8-216ENST00000573795 SERP2Q8N6R1 65 aa7.62□□□□□ -1.19
SNF8-216ENST00000573795 LCE3AQ5TA76 89 aa7.59□□□□□ -1.19
SNF8-216ENST00000573795 C10orf95Q9H7T3 257 aa7.59□□□□□ -1.19
SNF8-216ENST00000573795 KRTAP4-7Q9BYR0 210 aa7.44□□□□□ -1.22
SNF8-216ENST00000573795 A8MU10 97 aa7.43□□□□□ -1.22
SNF8-216ENST00000573795 KRTAP5-7Q6L8G8 165 aa7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms