RNA–Protein interactions for RNA: ENST00000573023.6

SLC12A4-212, Transcript of solute carrier family 12 member 4, humanhuman

TSL 5

Gene SLC12A4, Length 3,649 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC12A4-212ENST00000573023 J3QL48 77 aa9.7□□□□□ -0.86
SLC12A4-212ENST00000573023 SACSQ9NZJ4 4579 aa9.68□□□□□ -0.86
SLC12A4-212ENST00000573023 MYCBP2O75592 4640 aa9.65□□□□□ -0.86
SLC12A4-212ENST00000573023 LRP1Q07954 4544 aaKnown RBP9.61□□□□□ -0.87
SLC12A4-212ENST00000573023 APOBP04114 4563 aaKnown RBP9.58□□□□□ -0.88
SLC12A4-212ENST00000573023 P0C880 135 aa9.58□□□□□ -0.88
SLC12A4-212ENST00000573023 ROMO1P60602 79 aa9.58□□□□□ -0.88
SLC12A4-212ENST00000573023 KRTAP25-1Q3LHN0 102 aa9.56□□□□□ -0.88
SLC12A4-212ENST00000573023 KMT2CQ8NEZ4 4911 aaKnown RBP9.51□□□□□ -0.89
SLC12A4-212ENST00000573023 KIAA1109Q2LD37 5005 aa9.45□□□□□ -0.9
SLC12A4-212ENST00000573023 KRTAP10-6P60371 365 aaPredicted RBP9.44□□□□□ -0.9
SLC12A4-212ENST00000573023 KRTAP13-4Q3LI77 160 aa9.44□□□□□ -0.9
SLC12A4-212ENST00000573023 R4GN34 69 aa9.44□□□□□ -0.9
SLC12A4-212ENST00000573023 MT1HL1P0DM35 61 aa9.43□□□□□ -0.9
SLC12A4-212ENST00000573023 KRTAP3-3Q9BYR6 98 aa9.43□□□□□ -0.9
SLC12A4-212ENST00000573023 M0QZ58 72 aa9.43□□□□□ -0.9
SLC12A4-212ENST00000573023 SEC61BP60468 96 aaKnown RBP9.4□□□□□ -0.9
SLC12A4-212ENST00000573023 RYR2Q92736 4967 aa9.38□□□□□ -0.91
SLC12A4-212ENST00000573023 FAT3Q8TDW7 4589 aa9.37□□□□□ -0.91
SLC12A4-212ENST00000573023 TPRXLQ17RH7 258 aa9.37□□□□□ -0.91
SLC12A4-212ENST00000573023 C10orf95Q9H7T3 257 aa9.36□□□□□ -0.91
SLC12A4-212ENST00000573023 RYR3Q15413 4870 aa9.31□□□□□ -0.92
SLC12A4-212ENST00000573023 KRTAP17-1Q9BYP8 105 aa9.31□□□□□ -0.92
SLC12A4-212ENST00000573023 KRTAP3-2Q9BYR7 98 aa9.3□□□□□ -0.92
SLC12A4-212ENST00000573023 RYR1P21817 5038 aa9.3□□□□□ -0.92
SLC12A4-212ENST00000573023 KRTAP4-5Q9BYR2 181 aa9.26□□□□□ -0.93
SLC12A4-212ENST00000573023 KRTAP12-2P59991 146 aa9.24□□□□□ -0.93
SLC12A4-212ENST00000573023 H3BS24 57 aa9.17□□□□□ -0.94
SLC12A4-212ENST00000573023 CAMK2N1Q7Z7J9 78 aa9.16□□□□□ -0.94
SLC12A4-212ENST00000573023 HSPG2P98160 4391 aa9.13□□□□□ -0.95
SLC12A4-212ENST00000573023 LRP2P98164 4655 aa9.11□□□□□ -0.95
SLC12A4-212ENST00000573023 PKHD1L1Q86WI1 4243 aa9.11□□□□□ -0.95
SLC12A4-212ENST00000573023 KRTAP12-1P59990 96 aa9.11□□□□□ -0.95
SLC12A4-212ENST00000573023 TNXBP22105 4242 aa8.96□□□□□ -0.98
SLC12A4-212ENST00000573023 M0R2T5 61 aa8.93□□□□□ -0.98
SLC12A4-212ENST00000573023 LPAP08519 4548 aa8.89□□□□□ -0.99
SLC12A4-212ENST00000573023 EPPK1P58107 5090 aaKnown RBP8.85□□□□□ -0.99
SLC12A4-212ENST00000573023 NDUFAF8A1L188 74 aa8.83□□□□□ -1
SLC12A4-212ENST00000573023 LORP23490 312 aaPredicted RBP8.81□□□□□ -1
SLC12A4-212ENST00000573023 KRTAP4-1Q9BYQ7 146 aa8.79□□□□□ -1
SLC12A4-212ENST00000573023 ABCA13Q86UQ4 5058 aa8.71□□□□□ -1.01
SLC12A4-212ENST00000573023 HERC2O95714 4834 aa8.66□□□□□ -1.02
SLC12A4-212ENST00000573023 LUZP6Q538Z0 58 aa8.57□□□□□ -1.04
SLC12A4-212ENST00000573023 PLAC4Q8WY50 150 aa8.55□□□□□ -1.04
SLC12A4-212ENST00000573023 TNP1P09430 55 aa8.5□□□□□ -1.05
SLC12A4-212ENST00000573023 MUC2Q02817 5179 aa8.47□□□□□ -1.05
SLC12A4-212ENST00000573023 KRTAP15-1Q3LI76 137 aa8.43□□□□□ -1.06
SLC12A4-212ENST00000573023 PP632Q6XCG6 107 aa8.39□□□□□ -1.07
SLC12A4-212ENST00000573023 KRTAP10-10P60014 251 aa8.38□□□□□ -1.07
SLC12A4-212ENST00000573023 HERC1Q15751 4861 aa8.21□□□□□ -1.1
SLC12A4-212ENST00000573023 KRTAP19-2Q3LHN2 52 aa8.16□□□□□ -1.1
SLC12A4-212ENST00000573023 BIRC6Q9NR09 4857 aa8.12□□□□□ -1.11
SLC12A4-212ENST00000573023 MUC17Q685J3 4493 aa8.1□□□□□ -1.11
SLC12A4-212ENST00000573023 FAT4Q6V0I7 4981 aa8.1□□□□□ -1.11
SLC12A4-212ENST00000573023 RNF213Q63HN8 5207 aa8.04□□□□□ -1.12
SLC12A4-212ENST00000573023 A0A0A0MQY5 61 aa8.02□□□□□ -1.13
SLC12A4-212ENST00000573023 PCLOQ9Y6V0 5065 aa7.98□□□□□ -1.13
SLC12A4-212ENST00000573023 FLGP20930 4061 aaPredicted RBP7.95□□□□□ -1.14
SLC12A4-212ENST00000573023 MT1HP80294 61 aa7.94□□□□□ -1.14
SLC12A4-212ENST00000573023 LCE2CQ5TA81 110 aa7.9□□□□□ -1.15
SLC12A4-212ENST00000573023 KRTAP19-1Q8IUB9 90 aa7.85□□□□□ -1.15
SLC12A4-212ENST00000573023 SPRR2GQ9BYE4 73 aa7.85□□□□□ -1.15
SLC12A4-212ENST00000573023 MT1FP04733 61 aa7.85□□□□□ -1.15
SLC12A4-212ENST00000573023 MT2AP02795 61 aa7.84□□□□□ -1.15
SLC12A4-212ENST00000573023 UBR4Q5T4S7 5183 aa7.83□□□□□ -1.16
SLC12A4-212ENST00000573023 HMCN2Q8NDA2 5059 aa7.82□□□□□ -1.16
SLC12A4-212ENST00000573023 LCE3AQ5TA76 89 aa7.82□□□□□ -1.16
SLC12A4-212ENST00000573023 KRTAP23-1A1A580 65 aa7.67□□□□□ -1.18
SLC12A4-212ENST00000573023 PRO2289Q9P1D8 64 aa7.65□□□□□ -1.18
SLC12A4-212ENST00000573023 KRTAP9-8Q9BYQ0 159 aa7.61□□□□□ -1.19
SLC12A4-212ENST00000573023 KRTAP10-12P60413 245 aa7.6□□□□□ -1.19
SLC12A4-212ENST00000573023 KRTAP12-3P60328 96 aa7.52□□□□□ -1.21
SLC12A4-212ENST00000573023 MT1BP07438 61 aa7.44□□□□□ -1.22
SLC12A4-212ENST00000573023 KRTAP19-8Q3LI54 63 aa7.42□□□□□ -1.22
SLC12A4-212ENST00000573023 MT1XP80297 61 aa7.4□□□□□ -1.22
SLC12A4-212ENST00000573023 KRTAP10-5P60370 271 aa7.39□□□□□ -1.23
SLC12A4-212ENST00000573023 KRTAP10-7P60409 375 aaPredicted RBP7.35□□□□□ -1.23
SLC12A4-212ENST00000573023 KRTAP8-1Q8IUC2 63 aa7.34□□□□□ -1.23
SLC12A4-212ENST00000573023 KRTAP9-3Q9BYQ3 159 aa7.28□□□□□ -1.24
SLC12A4-212ENST00000573023 SPRR5A0A1B0GTR4 108 aa7.24□□□□□ -1.25
SLC12A4-212ENST00000573023 USH2AO75445 5202 aa7.16□□□□□ -1.26
SLC12A4-212ENST00000573023 FSIP2Q5CZC0 6907 aa7.13□□□□□ -1.27
SLC12A4-212ENST00000573023 KRTAP19-5Q3LI72 72 aa7.13□□□□□ -1.27
SLC12A4-212ENST00000573023 LCE2BO14633 110 aa7.09□□□□□ -1.27
SLC12A4-212ENST00000573023 KRTAP4-8A0A0G2JLE6 195 aa7.05□□□□□ -1.28
SLC12A4-212ENST00000573023 KRTAP4-8Q9BYQ9 185 aa7.05□□□□□ -1.28
SLC12A4-212ENST00000573023 KMT2DO14686 5537 aa6.97□□□□□ -1.29
SLC12A4-212ENST00000573023 LCE3CQ5T5A8 94 aa6.9□□□□□ -1.31
SLC12A4-212ENST00000573023 INE1O15225 51 aa6.78□□□□□ -1.32
SLC12A4-212ENST00000573023 LCE2AQ5TA79 106 aaPredicted RBP6.76□□□□□ -1.33
SLC12A4-212ENST00000573023 KRTAP4-7Q9BYR0 210 aa6.74□□□□□ -1.33
SLC12A4-212ENST00000573023 CRCT1Q9UGL9 99 aa6.73□□□□□ -1.33
SLC12A4-212ENST00000573023 KRTAP19-7Q3SYF9 63 aa6.54□□□□□ -1.36
SLC12A4-212ENST00000573023 KRTAP9-6A8MVA2 160 aa6.45□□□□□ -1.38
SLC12A4-212ENST00000573023 MT1LQ93083 61 aa6.44□□□□□ -1.38
SLC12A4-212ENST00000573023 MT1EP04732 61 aa6.43□□□□□ -1.38
SLC12A4-212ENST00000573023 DSTQ03001 7570 aaKnown RBP6.43□□□□□ -1.38
SLC12A4-212ENST00000573023 SSPOA2VEC9 5147 aa6.35□□□□□ -1.39
SLC12A4-212ENST00000573023 MT1GP13640 62 aa6.33□□□□□ -1.4
SLC12A4-212ENST00000573023 KRTAP4-3Q9BYR4 195 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms