RNA–Protein interactions for RNA: ENST00000572845.1

TVP23B-205, Transcript of trans-golgi network vesicle protein 23 homolog B, humanhuman

TSL 5

Gene TVP23B, Length 483 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23B-205ENST00000572845 CFAP46Q8IYW2 2715 aa0.72□□□□□ -2.29
TVP23B-205ENST00000572845 FLNAP21333 2647 aaKnown RBP0.71□□□□□ -2.3
TVP23B-205ENST00000572845 MAP1AP78559 2803 aaPredicted RBP0.71□□□□□ -2.3
TVP23B-205ENST00000572845 ANK3Q12955 4377 aaKnown RBP0.71□□□□□ -2.3
TVP23B-205ENST00000572845 CELSR3Q9NYQ7 3312 aa0.71□□□□□ -2.3
TVP23B-205ENST00000572845 CFAP54Q96N23 3096 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 DNAH3Q8TD57 4116 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 PKD1P98161 4303 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 DOPEY1Q5JWR5 2465 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 ZANQ9Y493 2812 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 AKAP9Q99996 3911 aa0.7□□□□□ -2.3
TVP23B-205ENST00000572845 FRYLO94915 3013 aa0.69□□□□□ -2.3
TVP23B-205ENST00000572845 MXRA5Q9NR99 2828 aa0.69□□□□□ -2.3
TVP23B-205ENST00000572845 DNAH7Q8WXX0 4024 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 RANBP2P49792 3224 aaKnown RBP0.68□□□□□ -2.3
TVP23B-205ENST00000572845 TGP01266 2768 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 SMR3BP02814 79 aaPredicted RBP0.68□□□□□ -2.3
TVP23B-205ENST00000572845 SPTAN1Q13813 2472 aaKnown RBP0.68□□□□□ -2.3
TVP23B-205ENST00000572845 Q9Y3F1 56 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 MGAM2Q2M2H8 2515 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 PKHD1L1Q86WI1 4243 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 NBEAQ8NFP9 2946 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 TEX15Q9BXT5 2789 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 MAST4O15021 2626 aa0.68□□□□□ -2.3
TVP23B-205ENST00000572845 HUWE1Q7Z6Z7 4374 aaKnown RBP0.67□□□□□ -2.3
TVP23B-205ENST00000572845 FLGP20930 4061 aaPredicted RBP0.67□□□□□ -2.3
TVP23B-205ENST00000572845 SPRR2DP22532 72 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 RPS29P62273 56 aaKnown RBP0.67□□□□□ -2.3
TVP23B-205ENST00000572845 LRBAP50851 2863 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 ITPR2Q14571 2701 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 RELNP78509 3460 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 HSPG2P98160 4391 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 TENM3Q9P273 2699 aa0.67□□□□□ -2.3
TVP23B-205ENST00000572845 CUBNO60494 3623 aa0.66□□□□□ -2.3
TVP23B-205ENST00000572845 KRTAP19-5Q3LI72 72 aa0.66□□□□□ -2.3
TVP23B-205ENST00000572845 DNAH10Q8IVF4 4471 aa0.66□□□□□ -2.3
TVP23B-205ENST00000572845 DNAH9Q9NYC9 4486 aa0.66□□□□□ -2.3
TVP23B-205ENST00000572845 ATMQ13315 3056 aa0.65□□□□□ -2.31
TVP23B-205ENST00000572845 SYNE1Q8NF91 8797 aaKnown RBP0.65□□□□□ -2.31
TVP23B-205ENST00000572845 DMXL2Q8TDJ6 3036 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 HTTP42858 3142 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 NBEAL1Q6ZS30 2694 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 COL6A3P12111 3177 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 LAMA3Q16787 3333 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 HTN3P15516 51 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 SPRR2BP35325 72 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 KRTAP6-2Q3LI66 62 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 PRUNE2Q8WUY3 3088 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 LAMA5O15230 3695 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 FAT3Q8TDW7 4589 aa0.64□□□□□ -2.31
TVP23B-205ENST00000572845 SPENQ96T58 3664 aaKnown RBP0.63□□□□□ -2.31
TVP23B-205ENST00000572845 CENPEQ02224 2701 aa0.63□□□□□ -2.31
TVP23B-205ENST00000572845 DNAH6Q9C0G6 4158 aa0.63□□□□□ -2.31
TVP23B-205ENST00000572845 CEP295Q9C0D2 2601 aa0.63□□□□□ -2.31
TVP23B-205ENST00000572845 HRNRQ86YZ3 2850 aaPredicted RBP0.63□□□□□ -2.31
TVP23B-205ENST00000572845 STAB2Q8WWQ8 2551 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 C5orf42Q9H799 3197 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 TRIOO75962 3097 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 CSMD1Q96PZ7 3565 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 MT1AP04731 61 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 KRTAP21-1Q3LI58 79 aa0.62□□□□□ -2.31
TVP23B-205ENST00000572845 LRP1Q07954 4544 aaKnown RBP0.62□□□□□ -2.31
TVP23B-205ENST00000572845 APOBP04114 4563 aaKnown RBP0.62□□□□□ -2.31
TVP23B-205ENST00000572845 LAMA1P25391 3075 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 DNAH1Q9P2D7 4330 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 DNAH12Q6ZR08 3092 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 HECTD4Q9Y4D8 3996 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 KALRNO60229 2985 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 IGSF10Q6WRI0 2623 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 BOD1L1Q8NFC6 3051 aa0.61□□□□□ -2.31
TVP23B-205ENST00000572845 SPRR2AP35326 72 aa0.6□□□□□ -2.31
TVP23B-205ENST00000572845 CMYA5Q8N3K9 4069 aa0.6□□□□□ -2.31
TVP23B-205ENST00000572845 TLN1Q9Y490 2541 aaKnown RBP0.6□□□□□ -2.31
TVP23B-205ENST00000572845 GPR98Q8WXG9 6306 aa0.59□□□□□ -2.31
TVP23B-205ENST00000572845 PLECQ15149 4684 aaKnown RBP0.59□□□□□ -2.31
TVP23B-205ENST00000572845 CD52P31358 61 aa0.59□□□□□ -2.31
TVP23B-205ENST00000572845 CEP350Q5VT06 3117 aa0.59□□□□□ -2.32
TVP23B-205ENST00000572845 AHNAKQ09666 5890 aaKnown RBP0.59□□□□□ -2.32
TVP23B-205ENST00000572845 SVEP1Q4LDE5 3571 aa0.58□□□□□ -2.32
TVP23B-205ENST00000572845 SPRR2FQ96RM1 72 aa0.57□□□□□ -2.32
TVP23B-205ENST00000572845 PKHD1P08F94 4074 aa0.57□□□□□ -2.32
TVP23B-205ENST00000572845 LPAP08519 4548 aa0.56□□□□□ -2.32
TVP23B-205ENST00000572845 MKI67P46013 3256 aaKnown RBP0.56□□□□□ -2.32
TVP23B-205ENST00000572845 DEFB4AO15263 64 aa0.56□□□□□ -2.32
TVP23B-205ENST00000572845 ADGRG4Q8IZF6 3080 aa0.56□□□□□ -2.32
TVP23B-205ENST00000572845 DNAH17Q9UFH2 4485 aa0.56□□□□□ -2.32
TVP23B-205ENST00000572845 MUC5BQ9HC84 5762 aaPredicted RBP0.56□□□□□ -2.32
TVP23B-205ENST00000572845 FREM2Q5SZK8 3169 aa0.55□□□□□ -2.32
TVP23B-205ENST00000572845 SPRR2EP22531 72 aa0.55□□□□□ -2.32
TVP23B-205ENST00000572845 SZT2Q5T011 3432 aa0.55□□□□□ -2.32
TVP23B-205ENST00000572845 LRP1BQ9NZR2 4599 aa0.54□□□□□ -2.32
TVP23B-205ENST00000572845 SPTBN5Q9NRC6 3674 aaKnown RBP0.53□□□□□ -2.32
TVP23B-205ENST00000572845 DCHS1Q96JQ0 3298 aa0.53□□□□□ -2.32
TVP23B-205ENST00000572845 DNAH5Q8TE73 4624 aa0.53□□□□□ -2.33
TVP23B-205ENST00000572845 DMDP11532 3685 aa0.52□□□□□ -2.33
TVP23B-205ENST00000572845 SMG1Q96Q15 3661 aaKnown RBP0.52□□□□□ -2.33
TVP23B-205ENST00000572845 CFAP47Q6ZTR5 3102 aa0.51□□□□□ -2.33
TVP23B-205ENST00000572845 HERC1Q15751 4861 aa0.51□□□□□ -2.33
TVP23B-205ENST00000572845 WDFY4Q6ZS81 3184 aa0.51□□□□□ -2.33
TVP23B-205ENST00000572845 DYNC1H1Q14204 4646 aaKnown RBP0.5□□□□□ -2.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms