RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 TOMM7Q9P0U1 55 aa3.07□□□□□ -1.92
SF3B3-214ENST00000572365 A0A1B0GVX0 72 aa3.06□□□□□ -1.92
SF3B3-214ENST00000572365 LINC01554Q52M75 96 aa3.06□□□□□ -1.92
SF3B3-214ENST00000572365 RNASE13Q5GAN3 156 aaKnown RBP3.06□□□□□ -1.92
SF3B3-214ENST00000572365 KRTAP4-1Q9BYQ7 146 aa3.06□□□□□ -1.92
SF3B3-214ENST00000572365 IGHV3OR16-9A0A0B4J2B5 98 aa3.05□□□□□ -1.92
SF3B3-214ENST00000572365 ANGP03950 147 aaKnown RBP3.05□□□□□ -1.92
SF3B3-214ENST00000572365 C6orf99Q4VX62 202 aa3.05□□□□□ -1.92
SF3B3-214ENST00000572365 PRR15LQ9BU68 103 aa3.05□□□□□ -1.92
SF3B3-214ENST00000572365 KCNQ1DNQ9H478 68 aa3.05□□□□□ -1.92
SF3B3-214ENST00000572365 PSORS1C2Q9UIG4 136 aa3.05□□□□□ -1.92
SF3B3-214ENST00000572365 Q6ZQY7 126 aa3.04□□□□□ -1.92
SF3B3-214ENST00000572365 A0A096LNI7 61 aa3.03□□□□□ -1.92
SF3B3-214ENST00000572365 IGLV6-57P01721 117 aa3.03□□□□□ -1.92
SF3B3-214ENST00000572365 KRTAP26-1Q6PEX3 210 aa3.03□□□□□ -1.92
SF3B3-214ENST00000572365 LINC01558Q9Y6Z2 57 aa3.03□□□□□ -1.92
SF3B3-214ENST00000572365 IGLV1-50A0A075B6I6 118 aa3.02□□□□□ -1.93
SF3B3-214ENST00000572365 SPAG11BQ08648 103 aa3.02□□□□□ -1.93
SF3B3-214ENST00000572365 LINC00959A0A1B0GUT2 108 aa3.01□□□□□ -1.93
SF3B3-214ENST00000572365 C1orf137Q5JT78 98 aa3.01□□□□□ -1.93
SF3B3-214ENST00000572365 IGLV5-48A0A075B6I7 105 aa3□□□□□ -1.93
SF3B3-214ENST00000572365 GVQW2A0A096LPI5 108 aaPredicted RBP3□□□□□ -1.93
SF3B3-214ENST00000572365 CNBPP62633 177 aaKnown RBP3□□□□□ -1.93
SF3B3-214ENST00000572365 FCGBPQ9Y6R7 5405 aaPredicted RBP2.99□□□□□ -1.93
SF3B3-214ENST00000572365 IGLV4-60A0A075B6I1 120 aa2.99□□□□□ -1.93
SF3B3-214ENST00000572365 A0A1W2PNN7 141 aa2.99□□□□□ -1.93
SF3B3-214ENST00000572365 MOBPQ13875 183 aa2.99□□□□□ -1.93
SF3B3-214ENST00000572365 Q5W150 140 aa2.99□□□□□ -1.93
SF3B3-214ENST00000572365 IGKV3OR2-268A0A0C4DH90 116 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 SPRR4Q96PI1 79 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 CAMK2N2Q96S95 79 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 TP53AIP1Q9HCN2 124 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 XAGE1AQ9HD64 81 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 SSPOA2VEC9 5147 aa2.98□□□□□ -1.93
SF3B3-214ENST00000572365 LINC00313P59037 77 aa2.97□□□□□ -1.93
SF3B3-214ENST00000572365 MT1HP80294 61 aa2.97□□□□□ -1.93
SF3B3-214ENST00000572365 USH2AO75445 5202 aa2.96□□□□□ -1.93
SF3B3-214ENST00000572365 H0Y9P7 68 aa2.96□□□□□ -1.94
SF3B3-214ENST00000572365 COA5Q86WW8 74 aa2.96□□□□□ -1.94
SF3B3-214ENST00000572365 IGLV7-43P04211 117 aa2.95□□□□□ -1.94
SF3B3-214ENST00000572365 LINC00483Q53H64 154 aa2.95□□□□□ -1.94
SF3B3-214ENST00000572365 SPAG11AQ6PDA7 123 aa2.94□□□□□ -1.94
SF3B3-214ENST00000572365 SYNE2Q8WXH0 6885 aaKnown RBP2.93□□□□□ -1.94
SF3B3-214ENST00000572365 IGHV6-1A0A0B4J1U7 121 aa2.92□□□□□ -1.94
SF3B3-214ENST00000572365 M0R2T5 61 aa2.92□□□□□ -1.94
SF3B3-214ENST00000572365 KRTAP19-2Q3LHN2 52 aa2.92□□□□□ -1.94
SF3B3-214ENST00000572365 KRTAP4-3Q9BYR4 195 aa2.91□□□□□ -1.94
SF3B3-214ENST00000572365 FLGP20930 4061 aaPredicted RBP2.9□□□□□ -1.95
SF3B3-214ENST00000572365 UQCR11O14957 56 aa2.9□□□□□ -1.95
SF3B3-214ENST00000572365 ACYP2P14621 99 aa2.9□□□□□ -1.95
SF3B3-214ENST00000572365 TPRXLQ17RH7 258 aa2.9□□□□□ -1.95
SF3B3-214ENST00000572365 K7EQZ3 153 aa2.89□□□□□ -1.95
SF3B3-214ENST00000572365 SPATA8Q6RVD6 105 aa2.89□□□□□ -1.95
SF3B3-214ENST00000572365 ST20-AS1Q8NBB2 130 aa2.89□□□□□ -1.95
SF3B3-214ENST00000572365 A0A1W2PNM2 257 aa2.88□□□□□ -1.95
SF3B3-214ENST00000572365 A8MWP4 228 aa2.88□□□□□ -1.95
SF3B3-214ENST00000572365 C8orf17Q9NRJ1 99 aa2.88□□□□□ -1.95
SF3B3-214ENST00000572365 MACF1Q9UPN3 7388 aaKnown RBP2.87□□□□□ -1.95
SF3B3-214ENST00000572365 KRTAP13-2Q52LG2 175 aa2.87□□□□□ -1.95
SF3B3-214ENST00000572365 UNQ6190/PRO20217Q6UXQ8 127 aa2.87□□□□□ -1.95
SF3B3-214ENST00000572365 Q6ZRX8 168 aa2.87□□□□□ -1.95
SF3B3-214ENST00000572365 ZNF706Q9Y5V0 76 aaPredicted RBP2.87□□□□□ -1.95
SF3B3-214ENST00000572365 A0A1B0GU69 56 aa2.86□□□□□ -1.95
SF3B3-214ENST00000572365 WFDC13Q8IUB5 93 aa2.86□□□□□ -1.95
SF3B3-214ENST00000572365 SPINK7P58062 85 aa2.85□□□□□ -1.95
SF3B3-214ENST00000572365 MIR22HGQ0VDD5 57 aa2.85□□□□□ -1.95
SF3B3-214ENST00000572365 LINC00304Q8N9R0 145 aa2.85□□□□□ -1.95
SF3B3-214ENST00000572365 DEFB105AQ8NG35 78 aa2.85□□□□□ -1.95
SF3B3-214ENST00000572365 KRTAP13-3Q3SY46 172 aa2.84□□□□□ -1.95
SF3B3-214ENST00000572365 KRTAP5-2Q701N4 177 aa2.84□□□□□ -1.95
SF3B3-214ENST00000572365 C6orf48Q9UBA6 75 aa2.84□□□□□ -1.95
SF3B3-214ENST00000572365 SPRR1AP35321 89 aa2.83□□□□□ -1.96
SF3B3-214ENST00000572365 HRES1P13985 223 aa2.82□□□□□ -1.96
SF3B3-214ENST00000572365 ROMO1P60602 79 aa2.82□□□□□ -1.96
SF3B3-214ENST00000572365 A0A087WSZ3 146 aa2.81□□□□□ -1.96
SF3B3-214ENST00000572365 PCOTHQ58A44 107 aa2.81□□□□□ -1.96
SF3B3-214ENST00000572365 CSAG1Q6PB30 78 aa2.81□□□□□ -1.96
SF3B3-214ENST00000572365 Q8NDZ9 215 aa2.81□□□□□ -1.96
SF3B3-214ENST00000572365 DMAC1Q96GE9 116 aa2.81□□□□□ -1.96
SF3B3-214ENST00000572365 K7ERS5 55 aa2.8□□□□□ -1.96
SF3B3-214ENST00000572365 SPRR5A0A1B0GTR4 108 aa2.79□□□□□ -1.96
SF3B3-214ENST00000572365 KRTAP20-1Q3LI63 56 aa2.79□□□□□ -1.96
SF3B3-214ENST00000572365 IGFL1Q6UW32 110 aa2.79□□□□□ -1.96
SF3B3-214ENST00000572365 COX6B2Q6YFQ2 88 aa2.79□□□□□ -1.96
SF3B3-214ENST00000572365 MMP24-AS1A0A0U1RRL7 71 aa2.78□□□□□ -1.96
SF3B3-214ENST00000572365 SPRR1BP22528 89 aa2.78□□□□□ -1.96
SF3B3-214ENST00000572365 KRTAP25-1Q3LHN0 102 aa2.78□□□□□ -1.96
SF3B3-214ENST00000572365 LINC00472Q9H8W2 130 aa2.78□□□□□ -1.96
SF3B3-214ENST00000572365 KRTAP6-3Q3LI67 103 aa2.77□□□□□ -1.97
SF3B3-214ENST00000572365 MRPL34Q9BQ48 92 aaKnown RBP2.77□□□□□ -1.97
SF3B3-214ENST00000572365 MUC12Q9UKN1 5478 aa2.75□□□□□ -1.97
SF3B3-214ENST00000572365 A8MUU9 505 aa2.75□□□□□ -1.97
SF3B3-214ENST00000572365 C9orf92A6NGG3 77 aa2.74□□□□□ -1.97
SF3B3-214ENST00000572365 NEBP20929 6669 aa2.73□□□□□ -1.97
SF3B3-214ENST00000572365 ADM2Q7Z4H4 148 aa2.73□□□□□ -1.97
SF3B3-214ENST00000572365 PRLHP81277 87 aa2.72□□□□□ -1.97
SF3B3-214ENST00000572365 LUZP6Q538Z0 58 aa2.71□□□□□ -1.98
SF3B3-214ENST00000572365 LCE3AQ5TA76 89 aa2.71□□□□□ -1.98
SF3B3-214ENST00000572365 LCE3DQ9BYE3 92 aa2.71□□□□□ -1.98
SF3B3-214ENST00000572365 MT2AP02795 61 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms