RNA–Protein interactions for RNA: ENST00000571190.1

CIITA-206, Transcript of class II major histocompatibility complex transactivator, humanhuman

Gene CIITA, Length 479 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIITA-206ENST00000571190 UBL5Q9BZL1 73 aa7.66□□□□□ -1.18
CIITA-206ENST00000571190 FAM240AA0A1B0GVK7 77 aa7.64□□□□□ -1.19
CIITA-206ENST00000571190 A0A087WVE0 104 aa7.63□□□□□ -1.19
CIITA-206ENST00000571190 ACYP1P07311 99 aa7.63□□□□□ -1.19
CIITA-206ENST00000571190 K7ERU9 68 aa7.62□□□□□ -1.19
CIITA-206ENST00000571190 MDN1Q9NU22 5596 aa7.62□□□□□ -1.19
CIITA-206ENST00000571190 TP53AIP1Q9HCN2 124 aa7.6□□□□□ -1.19
CIITA-206ENST00000571190 CRIPTQ9P021 101 aa7.58□□□□□ -1.2
CIITA-206ENST00000571190 CYP4F30PQ9H0H9 118 aa7.57□□□□□ -1.2
CIITA-206ENST00000571190 IMUPQ9GZP8 106 aa7.55□□□□□ -1.2
CIITA-206ENST00000571190 LINC00643Q86TS7 51 aa7.51□□□□□ -1.21
CIITA-206ENST00000571190 KRTAP2-3P0C7H8 128 aa7.48□□□□□ -1.21
CIITA-206ENST00000571190 KRTAP2-4Q9BYR9 128 aa7.48□□□□□ -1.21
CIITA-206ENST00000571190 ATP5EP2Q5VTU8 51 aa7.46□□□□□ -1.22
CIITA-206ENST00000571190 H0YAA0 97 aa7.44□□□□□ -1.22
CIITA-206ENST00000571190 MT-ATP8P03928 68 aa7.44□□□□□ -1.22
CIITA-206ENST00000571190 TRAV22A0A0B4J277 110 aa7.42□□□□□ -1.22
CIITA-206ENST00000571190 LOC101927531A0A1B0GV80 90 aa7.42□□□□□ -1.22
CIITA-206ENST00000571190 SPRR2FQ96RM1 72 aa7.42□□□□□ -1.22
CIITA-206ENST00000571190 HIST1H4AP62805 103 aaKnown RBP7.41□□□□□ -1.22
CIITA-206ENST00000571190 MT1XP80297 61 aa7.41□□□□□ -1.22
CIITA-206ENST00000571190 NDUFC1O43677 76 aa7.38□□□□□ -1.23
CIITA-206ENST00000571190 SPRR2EP22531 72 aa7.38□□□□□ -1.23
CIITA-206ENST00000571190 SPRR2BP35325 72 aa7.38□□□□□ -1.23
CIITA-206ENST00000571190 SPRR2AP35326 72 aa7.38□□□□□ -1.23
CIITA-206ENST00000571190 ADM2Q7Z4H4 148 aa7.35□□□□□ -1.23
CIITA-206ENST00000571190 PRO2289Q9P1D8 64 aa7.33□□□□□ -1.24
CIITA-206ENST00000571190 A8MUN3 132 aa7.32□□□□□ -1.24
CIITA-206ENST00000571190 LCE1AQ5T7P2 110 aa7.3□□□□□ -1.24
CIITA-206ENST00000571190 KRTAP8-1Q8IUC2 63 aa7.29□□□□□ -1.24
CIITA-206ENST00000571190 UQCRQO14949 82 aa7.28□□□□□ -1.24
CIITA-206ENST00000571190 H0Y9P7 68 aa7.27□□□□□ -1.25
CIITA-206ENST00000571190 KRTAP12-2P59991 146 aa7.25□□□□□ -1.25
CIITA-206ENST00000571190 ATOX1O00244 68 aa7.24□□□□□ -1.25
CIITA-206ENST00000571190 PLAC4Q8WY50 150 aa7.24□□□□□ -1.25
CIITA-206ENST00000571190 KRTAP2-2Q9BYT5 123 aa7.23□□□□□ -1.25
CIITA-206ENST00000571190 KRTAP2-1Q9BYU5 128 aa7.23□□□□□ -1.25
CIITA-206ENST00000571190 KRTAP4-8A0A0G2JLE6 195 aa7.2□□□□□ -1.26
CIITA-206ENST00000571190 KRTAP4-8Q9BYQ9 185 aa7.2□□□□□ -1.26
CIITA-206ENST00000571190 P0C880 135 aa7.18□□□□□ -1.26
CIITA-206ENST00000571190 SCGB1A1P11684 91 aa7.18□□□□□ -1.26
CIITA-206ENST00000571190 R4GN34 69 aa7.15□□□□□ -1.26
CIITA-206ENST00000571190 LINC00208Q96KT6 92 aa7.14□□□□□ -1.27
CIITA-206ENST00000571190 SPRR2DP22532 72 aa7.13□□□□□ -1.27
CIITA-206ENST00000571190 OCR1Q9BZK8 76 aa7.13□□□□□ -1.27
CIITA-206ENST00000571190 M0QZ58 72 aa7.1□□□□□ -1.27
CIITA-206ENST00000571190 KRTAP3-2Q9BYR7 98 aa7.09□□□□□ -1.27
CIITA-206ENST00000571190 KRTAP10-7P60409 375 aaPredicted RBP7.07□□□□□ -1.28
CIITA-206ENST00000571190 TRAV7A0A075B6U4 112 aa7.06□□□□□ -1.28
CIITA-206ENST00000571190 C20orf197Q8N268 126 aa7.05□□□□□ -1.28
CIITA-206ENST00000571190 SMIM20Q8N5G0 67 aa7.05□□□□□ -1.28
CIITA-206ENST00000571190 KRTAP10-12P60413 245 aa7.01□□□□□ -1.29
CIITA-206ENST00000571190 LINC01554Q52M75 96 aa7.01□□□□□ -1.29
CIITA-206ENST00000571190 SERP2Q8N6R1 65 aa7.01□□□□□ -1.29
CIITA-206ENST00000571190 MP68P56378 58 aa7□□□□□ -1.29
CIITA-206ENST00000571190 ANAPC13Q9BS18 74 aa7□□□□□ -1.29
CIITA-206ENST00000571190 LCE3BQ5TA77 95 aa6.97□□□□□ -1.29
CIITA-206ENST00000571190 DMAC1Q96GE9 116 aa6.97□□□□□ -1.29
CIITA-206ENST00000571190 COX7CP15954 63 aa6.95□□□□□ -1.3
CIITA-206ENST00000571190 SNURFQ9Y675 71 aa6.93□□□□□ -1.3
CIITA-206ENST00000571190 H3BPC8 53 aa6.92□□□□□ -1.3
CIITA-206ENST00000571190 CCDC179H3BU77 68 aa6.88□□□□□ -1.31
CIITA-206ENST00000571190 CYSTM1Q9H1C7 97 aa6.83□□□□□ -1.32
CIITA-206ENST00000571190 PCP4P48539 62 aa6.75□□□□□ -1.33
CIITA-206ENST00000571190 H7BZZ5 65 aa6.74□□□□□ -1.33
CIITA-206ENST00000571190 ACYP2P14621 99 aa6.7□□□□□ -1.34
CIITA-206ENST00000571190 SPANXA2-OT1Q8N9U9 137 aa6.67□□□□□ -1.34
CIITA-206ENST00000571190 LCE5AQ5TCM9 118 aa6.64□□□□□ -1.35
CIITA-206ENST00000571190 SPTSSBQ8NFR3 76 aa6.64□□□□□ -1.35
CIITA-206ENST00000571190 KRTAP19-7Q3SYF9 63 aa6.63□□□□□ -1.35
CIITA-206ENST00000571190 DSTQ03001 7570 aaKnown RBP6.62□□□□□ -1.35
CIITA-206ENST00000571190 KRTAP13-4Q3LI77 160 aa6.61□□□□□ -1.35
CIITA-206ENST00000571190 KRTAP4-9Q9BYQ8 210 aa6.6□□□□□ -1.35
CIITA-206ENST00000571190 GPR98Q8WXG9 6306 aa6.6□□□□□ -1.35
CIITA-206ENST00000571190 TMEM258P61165 79 aa6.58□□□□□ -1.36
CIITA-206ENST00000571190 MT1EP04732 61 aa6.57□□□□□ -1.36
CIITA-206ENST00000571190 KRTAP19-3Q7Z4W3 81 aa6.56□□□□□ -1.36
CIITA-206ENST00000571190 CHKB-CPT1BH3BT56 60 aa6.54□□□□□ -1.36
CIITA-206ENST00000571190 ATP5EP56381 51 aaPredicted RBP6.54□□□□□ -1.36
CIITA-206ENST00000571190 COA5Q86WW8 74 aa6.52□□□□□ -1.37
CIITA-206ENST00000571190 CAMK2N1Q7Z7J9 78 aa6.51□□□□□ -1.37
CIITA-206ENST00000571190 LCE1DQ5T752 114 aa6.41□□□□□ -1.38
CIITA-206ENST00000571190 SERP1Q9Y6X1 66 aa6.38□□□□□ -1.39
CIITA-206ENST00000571190 MT1GP13640 62 aa6.36□□□□□ -1.39
CIITA-206ENST00000571190 KRTAP19-5Q3LI72 72 aa6.36□□□□□ -1.39
CIITA-206ENST00000571190 A0A0D9SG42 100 aa6.35□□□□□ -1.39
CIITA-206ENST00000571190 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
CIITA-206ENST00000571190 MT4P47944 62 aa6.28□□□□□ -1.4
CIITA-206ENST00000571190 MT1MQ8N339 61 aa6.27□□□□□ -1.41
CIITA-206ENST00000571190 PP632Q6XCG6 107 aa6.26□□□□□ -1.41
CIITA-206ENST00000571190 HMCN1Q96RW7 5635 aa6.26□□□□□ -1.41
CIITA-206ENST00000571190 SPATA8Q6RVD6 105 aa6.25□□□□□ -1.41
CIITA-206ENST00000571190 MT1LQ93083 61 aa6.23□□□□□ -1.41
CIITA-206ENST00000571190 SPINT4Q6UDR6 99 aa6.22□□□□□ -1.41
CIITA-206ENST00000571190 KRTAP12-1P59990 96 aa6.21□□□□□ -1.42
CIITA-206ENST00000571190 RPS28P62857 69 aaKnown RBP6.2□□□□□ -1.42
CIITA-206ENST00000571190 KRTAP5-4Q6L8H1 288 aa6.18□□□□□ -1.42
CIITA-206ENST00000571190 KRTAP4-3Q9BYR4 195 aa6.18□□□□□ -1.42
CIITA-206ENST00000571190 SMIM26A0A096LP01 95 aa6.16□□□□□ -1.42
CIITA-206ENST00000571190 LINC01558Q9Y6Z2 57 aa6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms